RNA–Protein interactions for RNA: ENST00000503674.5

SDHA-203, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,426 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-203ENST00000503674 NISCHQ9Y2I1 1504 aa28.56■■■□□ 2.16
SDHA-203ENST00000503674 CCDC180Q9P1Z9 1646 aa24.78■■□□□ 1.56
SDHA-203ENST00000503674 ZCCHC6Q5VYS8 1495 aaKnown RBP24.09■■□□□ 1.45
SDHA-203ENST00000503674 DCAF1Q9Y4B6 1507 aa23.64■■□□□ 1.38
SDHA-203ENST00000503674 HRCP23327 699 aa23.64■■□□□ 1.37
SDHA-203ENST00000503674 SHROOM4Q9ULL8 1493 aa23.53■■□□□ 1.36
SDHA-203ENST00000503674 ABCC9O60706 1549 aa23.46■■□□□ 1.35
SDHA-203ENST00000503674 DCAF8L2P0C7V8 631 aa23.34■■□□□ 1.33
SDHA-203ENST00000503674 MYO15BQ96JP2 1530 aa23.21■■□□□ 1.31
SDHA-203ENST00000503674 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
SDHA-203ENST00000503674 SUPT5HO00267 1087 aaKnown RBP23.04■■□□□ 1.28
SDHA-203ENST00000503674 PCGF6Q9BYE7 350 aa23.04■■□□□ 1.28
SDHA-203ENST00000503674 NACADO15069 1562 aa22.93■■□□□ 1.26
SDHA-203ENST00000503674 PELP1Q8IZL8 1130 aaKnown RBP22.92■■□□□ 1.26
SDHA-203ENST00000503674 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
SDHA-203ENST00000503674 SCRIBQ14160 1630 aa22.8■■□□□ 1.24
SDHA-203ENST00000503674 RB1CC1Q8TDY2 1594 aa22.63■■□□□ 1.21
SDHA-203ENST00000503674 SCAF1Q9H7N4 1312 aaKnown RBP22.4■■□□□ 1.18
SDHA-203ENST00000503674 TRIM26Q12899 539 aaPredicted RBP22.33■■□□□ 1.17
SDHA-203ENST00000503674 UNC13AQ9UPW8 1703 aa22.29■■□□□ 1.16
SDHA-203ENST00000503674 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
SDHA-203ENST00000503674 LOC105371045A0A1W2PR82 267 aa22.23■■□□□ 1.15
SDHA-203ENST00000503674 ZEB1P37275 1124 aaPredicted RBP22.19■■□□□ 1.14
SDHA-203ENST00000503674 CECR2Q9BXF3 1484 aa22.14■■□□□ 1.13
SDHA-203ENST00000503674 MROH2BQ7Z745 1585 aa22.08■■□□□ 1.12
SDHA-203ENST00000503674 MYT1Q01538 1121 aa22.06■■□□□ 1.12
SDHA-203ENST00000503674 PABPN1Q86U42 306 aaKnown RBP eCLIP22.04■■□□□ 1.12
SDHA-203ENST00000503674 BICRAQ9NZM4 1560 aa22.03■■□□□ 1.12
SDHA-203ENST00000503674 BAZ1AQ9NRL2 1556 aaPredicted RBP22.03■■□□□ 1.12
SDHA-203ENST00000503674 WIZO95785 1651 aa21.95■■□□□ 1.1
SDHA-203ENST00000503674 SMARCA4P51532 1647 aa21.9■■□□□ 1.1
SDHA-203ENST00000503674 ACIN1Q9UKV3 1341 aaKnown RBP21.83■■□□□ 1.08
SDHA-203ENST00000503674 NEUROD1Q13562 356 aa21.75■■□□□ 1.07
SDHA-203ENST00000503674 TOP2AP11388 1531 aaKnown RBP21.72■■□□□ 1.07
SDHA-203ENST00000503674 PEG3Q9GZU2 1588 aa21.62■■□□□ 1.05
SDHA-203ENST00000503674 GTF3C3Q9Y5Q9 886 aa21.61■■□□□ 1.05
SDHA-203ENST00000503674 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
SDHA-203ENST00000503674 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
SDHA-203ENST00000503674 CENPBP07199 599 aaPredicted RBP21.48■■□□□ 1.03
SDHA-203ENST00000503674 CCDC88BA6NC98 1476 aa21.47■■□□□ 1.03
SDHA-203ENST00000503674 TRIM41Q8WV44 630 aa21.44■■□□□ 1.02
SDHA-203ENST00000503674 ATAD2BQ9ULI0 1458 aa21.39■■□□□ 1.01
SDHA-203ENST00000503674 DIEXFQ68CQ4 756 aaKnown RBP21.38■■□□□ 1.01
SDHA-203ENST00000503674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.33■■□□□ 1
SDHA-203ENST00000503674 BAZ1BQ9UIG0 1483 aaKnown RBP21.3■■□□□ 1
SDHA-203ENST00000503674 FAM9AQ8IZU1 332 aaPredicted RBP21.27■■□□□ 1
SDHA-203ENST00000503674 CCER1Q8TC90 406 aaPredicted RBP21.27■■□□□ 1
SDHA-203ENST00000503674 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
SDHA-203ENST00000503674 CC2D2AQ9P2K1 1620 aa21.2■□□□□ 0.98
SDHA-203ENST00000503674 ABCC8Q09428 1581 aa21.18■□□□□ 0.98
SDHA-203ENST00000503674 HMGXB3Q12766 1538 aa21.18■□□□□ 0.98
SDHA-203ENST00000503674 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
SDHA-203ENST00000503674 EHMT2Q96KQ7 1210 aa21.12■□□□□ 0.97
SDHA-203ENST00000503674 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
SDHA-203ENST00000503674 ZNF316A6NFI3 1004 aaPredicted RBP20.96■□□□□ 0.95
SDHA-203ENST00000503674 YTHDC1Q96MU7 727 aaKnown RBP20.96■□□□□ 0.95
SDHA-203ENST00000503674 EEA1Q15075 1411 aa20.92■□□□□ 0.94
SDHA-203ENST00000503674 SYNJ1O43426 1573 aa20.91■□□□□ 0.94
SDHA-203ENST00000503674 PRDM2Q13029 1718 aa20.83■□□□□ 0.93
SDHA-203ENST00000503674 MIER1Q8N108 512 aa20.83■□□□□ 0.93
SDHA-203ENST00000503674 SOGA1O94964 1423 aa20.83■□□□□ 0.93
SDHA-203ENST00000503674 TOP2BQ02880 1626 aa20.8■□□□□ 0.92
SDHA-203ENST00000503674 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
SDHA-203ENST00000503674 CFTRP13569 1480 aa20.79■□□□□ 0.92
SDHA-203ENST00000503674 RUSC2Q8N2Y8 1516 aa20.74■□□□□ 0.91
SDHA-203ENST00000503674 TTBK1Q5TCY1 1321 aaPredicted RBP20.72■□□□□ 0.91
SDHA-203ENST00000503674 CSRNP3Q8WYN3 585 aa20.7■□□□□ 0.9
SDHA-203ENST00000503674 KIF21BO75037 1637 aa20.66■□□□□ 0.9
SDHA-203ENST00000503674 GOLGA3Q08378 1498 aa20.64■□□□□ 0.89
SDHA-203ENST00000503674 TNIKQ9UKE5 1360 aa20.63■□□□□ 0.89
SDHA-203ENST00000503674 CUX1P39880 1505 aa20.63■□□□□ 0.89
SDHA-203ENST00000503674 ANP32EQ9BTT0 268 aa20.61■□□□□ 0.89
SDHA-203ENST00000503674 BCL11AQ9H165 835 aa20.61■□□□□ 0.89
SDHA-203ENST00000503674 CADPSQ9ULU8 1353 aa20.6■□□□□ 0.89
SDHA-203ENST00000503674 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
SDHA-203ENST00000503674 CLSPNQ9HAW4 1339 aa20.59■□□□□ 0.89
SDHA-203ENST00000503674 SUPT16HQ9Y5B9 1047 aaKnown RBP20.59■□□□□ 0.89
SDHA-203ENST00000503674 CEP162Q5TB80 1403 aa20.57■□□□□ 0.88
SDHA-203ENST00000503674 TSHZ2Q9NRE2 1034 aa20.53■□□□□ 0.88
SDHA-203ENST00000503674 NESP48681 1621 aa20.47■□□□□ 0.87
SDHA-203ENST00000503674 UBTFP17480 764 aaKnown RBP20.46■□□□□ 0.87
SDHA-203ENST00000503674 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
SDHA-203ENST00000503674 RAPGEF2Q9Y4G8 1499 aa20.41■□□□□ 0.86
SDHA-203ENST00000503674 KIF27Q86VH2 1401 aa20.4■□□□□ 0.86
SDHA-203ENST00000503674 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
SDHA-203ENST00000503674 PRXQ9BXM0 1461 aa20.39■□□□□ 0.85
SDHA-203ENST00000503674 LAMC3Q9Y6N6 1575 aa20.39■□□□□ 0.85
SDHA-203ENST00000503674 DNMBPQ6XZF7 1577 aa20.33■□□□□ 0.84
SDHA-203ENST00000503674 FGD5Q6ZNL6 1462 aa20.32■□□□□ 0.84
SDHA-203ENST00000503674 HNRNPUL2Q1KMD3 747 aaKnown RBP20.32■□□□□ 0.84
SDHA-203ENST00000503674 CLIP1P30622 1438 aa20.3■□□□□ 0.84
SDHA-203ENST00000503674 CUX2O14529 1486 aa20.26■□□□□ 0.83
SDHA-203ENST00000503674 TOPBP1Q92547 1522 aa20.24■□□□□ 0.83
SDHA-203ENST00000503674 VPS8Q8N3P4 1428 aa20.2■□□□□ 0.83
SDHA-203ENST00000503674 KIF21AQ7Z4S6 1674 aa20.2■□□□□ 0.82
SDHA-203ENST00000503674 POLA1P09884 1462 aaPredicted RBP20.17■□□□□ 0.82
SDHA-203ENST00000503674 PDS5BQ9NTI5 1447 aa20.17■□□□□ 0.82
SDHA-203ENST00000503674 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
SDHA-203ENST00000503674 IGF1RP08069 1367 aa20.16■□□□□ 0.82
SDHA-203ENST00000503674 URB2Q14146 1524 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms