RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 NESP48681 1621 aa35.28■■■■□ 3.24
DDX41-202ENST00000503078 LRRC9Q6ZRR7 1453 aa35.27■■■■□ 3.24
DDX41-202ENST00000503078 SETD5Q9C0A6 1442 aa35.26■■■■□ 3.24
DDX41-202ENST00000503078 CARMIL1Q5VZK9 1371 aa35.25■■■■□ 3.23
DDX41-202ENST00000503078 DNMBPQ6XZF7 1577 aa35.2■■■■□ 3.23
DDX41-202ENST00000503078 LAMC3Q9Y6N6 1575 aa35.18■■■■□ 3.22
DDX41-202ENST00000503078 PHLDB1Q86UU1 1377 aa35.17■■■■□ 3.22
DDX41-202ENST00000503078 FHAD1B1AJZ9 1412 aa35.16■■■■□ 3.22
DDX41-202ENST00000503078 CFAP43Q8NDM7 1665 aa35.14■■■■□ 3.22
DDX41-202ENST00000503078 TOPBP1Q92547 1522 aa35.12■■■■□ 3.21
DDX41-202ENST00000503078 WDR97A6NE52 1622 aa35.06■■■■□ 3.2
DDX41-202ENST00000503078 PCF11O94913 1555 aaKnown RBP35.06■■■■□ 3.2
DDX41-202ENST00000503078 POLA1P09884 1462 aaPredicted RBP35.04■■■■□ 3.2
DDX41-202ENST00000503078 FAM50AQ14320 339 aaKnown RBP35.04■■■■□ 3.2
DDX41-202ENST00000503078 KCNH8Q96L42 1107 aa35.03■■■■□ 3.2
DDX41-202ENST00000503078 DNAJC5BQ9UF47 199 aa35.03■■■■□ 3.2
DDX41-202ENST00000503078 ABCA10Q8WWZ4 1543 aa35.01■■■■□ 3.19
DDX41-202ENST00000503078 RAD54L2Q9Y4B4 1467 aa34.99■■■■□ 3.19
DDX41-202ENST00000503078 SIN3AQ96ST3 1273 aa34.99■■■■□ 3.19
DDX41-202ENST00000503078 TIMELESSQ9UNS1 1208 aa34.99■■■■□ 3.19
DDX41-202ENST00000503078 URB2Q14146 1524 aaKnown RBP34.94■■■■□ 3.18
DDX41-202ENST00000503078 DDX10Q13206 875 aaKnown RBP34.92■■■■□ 3.18
DDX41-202ENST00000503078 FYCO1Q9BQS8 1478 aa34.91■■■■□ 3.18
DDX41-202ENST00000503078 PDS5BQ9NTI5 1447 aa34.91■■■■□ 3.18
DDX41-202ENST00000503078 P3H3Q8IVL6 736 aa34.91■■■■□ 3.18
DDX41-202ENST00000503078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.89■■■■□ 3.18
DDX41-202ENST00000503078 TSHZ2Q9NRE2 1034 aa34.89■■■■□ 3.18
DDX41-202ENST00000503078 EFCAB5A4FU69 1503 aa34.87■■■■□ 3.17
DDX41-202ENST00000503078 FHOD3Q2V2M9 1422 aa34.86■■■■□ 3.17
DDX41-202ENST00000503078 PPP1R15AO75807 674 aaPredicted RBP34.86■■■■□ 3.17
DDX41-202ENST00000503078 ATP1B4Q9UN42 357 aaPredicted RBP34.85■■■■□ 3.17
DDX41-202ENST00000503078 AQRO60306 1485 aaKnown RBP eCLIP34.84■■■■□ 3.177e-8■■■■■ 75.9
DDX41-202ENST00000503078 CASKIN1Q8WXD9 1431 aa34.84■■■■□ 3.17
DDX41-202ENST00000503078 KIF21AQ7Z4S6 1674 aa34.77■■■■□ 3.16
DDX41-202ENST00000503078 CUL7Q14999 1698 aa34.73■■■■□ 3.15
DDX41-202ENST00000503078 CTTNBP2Q8WZ74 1663 aa34.72■■■■□ 3.15
DDX41-202ENST00000503078 CCER2I3L3R5 266 aa34.7■■■■□ 3.15
DDX41-202ENST00000503078 FGD6Q6ZV73 1430 aa34.68■■■■□ 3.14
DDX41-202ENST00000503078 FMN1Q68DA7 1419 aa34.66■■■■□ 3.14
DDX41-202ENST00000503078 ABCA5Q8WWZ7 1642 aa34.64■■■■□ 3.14
DDX41-202ENST00000503078 FKBP8Q14318 412 aa34.64■■■■□ 3.14
DDX41-202ENST00000503078 HIRIP3Q9BW71 556 aaPredicted RBP34.63■■■■□ 3.13
DDX41-202ENST00000503078 ANP32CO43423 234 aa34.63■■■■□ 3.13
DDX41-202ENST00000503078 CCDC18Q5T9S5 1454 aa34.61■■■■□ 3.13
DDX41-202ENST00000503078 SNAPC4Q5SXM2 1469 aa34.6■■■■□ 3.13
DDX41-202ENST00000503078 BCANQ96GW7 911 aa34.6■■■■□ 3.13
DDX41-202ENST00000503078 TONSLQ96HA7 1378 aa34.6■■■■□ 3.13
DDX41-202ENST00000503078 TDRD9Q8NDG6 1382 aaKnown RBP34.58■■■■□ 3.13
DDX41-202ENST00000503078 HFM1A2PYH4 1435 aa34.57■■■■□ 3.12
DDX41-202ENST00000503078 UACAQ9BZF9 1416 aa34.56■■■■□ 3.12
DDX41-202ENST00000503078 GAPVD1Q14C86 1478 aa34.55■■■■□ 3.12
DDX41-202ENST00000503078 MTUS2Q5JR59 1369 aa34.54■■■■□ 3.12
DDX41-202ENST00000503078 PTPN23Q9H3S7 1636 aa34.53■■■■□ 3.12
DDX41-202ENST00000503078 TARBP1Q13395 1621 aaKnown RBP34.52■■■■□ 3.12
DDX41-202ENST00000503078 PTPRKQ15262 1439 aa34.51■■■■□ 3.12
DDX41-202ENST00000503078 NEFLP07196 543 aa34.5■■■■□ 3.11
DDX41-202ENST00000503078 TRIM52Q96A61 297 aa34.46■■■■□ 3.11
DDX41-202ENST00000503078 SAMD9Q5K651 1589 aa34.46■■■■□ 3.11
DDX41-202ENST00000503078 ANP32EQ9BTT0 268 aa34.44■■■■□ 3.1
DDX41-202ENST00000503078 LRRIQ1Q96JM4 1722 aa34.43■■■■□ 3.1
DDX41-202ENST00000503078 NAIPQ13075 1403 aa34.43■■■■□ 3.1
DDX41-202ENST00000503078 MYOM3Q5VTT5 1437 aa34.42■■■■□ 3.1
DDX41-202ENST00000503078 NCOA2Q15596 1464 aa34.42■■■■□ 3.1
DDX41-202ENST00000503078 MRC2Q9UBG0 1479 aa34.41■■■■□ 3.1
DDX41-202ENST00000503078 GRIN2BQ13224 1484 aa34.39■■■■□ 3.1
DDX41-202ENST00000503078 THOC2Q8NI27 1593 aaKnown RBP34.38■■■■□ 3.09
DDX41-202ENST00000503078 SUPT6HQ7KZ85 1726 aaKnown RBP34.37■■■■□ 3.09
DDX41-202ENST00000503078 EHBP1L1Q8N3D4 1523 aa34.34■■■■□ 3.09
DDX41-202ENST00000503078 KDM5BQ9UGL1 1544 aa34.33■■■■□ 3.09
DDX41-202ENST00000503078 UGGT2Q9NYU1 1516 aa34.26■■■■□ 3.07
DDX41-202ENST00000503078 PBRM1Q86U86 1689 aa34.25■■■■□ 3.07
DDX41-202ENST00000503078 ARHGEF11O15085 1522 aa34.23■■■■□ 3.07
DDX41-202ENST00000503078 WDR62O43379 1518 aa34.2■■■■□ 3.06
DDX41-202ENST00000503078 RBM19Q9Y4C8 960 aaKnown RBP34.19■■■■□ 3.06
DDX41-202ENST00000503078 GCC2Q8IWJ2 1684 aa34.17■■■■□ 3.06
DDX41-202ENST00000503078 TCOF1Q13428 1488 aaKnown RBP34.16■■■■□ 3.06
DDX41-202ENST00000503078 MAGI3Q5TCQ9 1506 aa34.15■■■■□ 3.06
DDX41-202ENST00000503078 HECW1Q76N89 1606 aa34.15■■■■□ 3.06
DDX41-202ENST00000503078 IFT140Q96RY7 1462 aa34.13■■■■□ 3.05
DDX41-202ENST00000503078 ADAMTS12P58397 1594 aa34.12■■■■□ 3.05
DDX41-202ENST00000503078 RRP7BPQ9NSQ0 103 aa34.1■■■■□ 3.05
DDX41-202ENST00000503078 AKNAQ7Z591 1439 aa34.09■■■■□ 3.05
DDX41-202ENST00000503078 DENND4BO75064 1496 aaPredicted RBP34.09■■■■□ 3.05
DDX41-202ENST00000503078 HNRNPUQ00839 825 aaKnown RBP eCLIP34.09■■■■□ 3.05
DDX41-202ENST00000503078 WASHC2AQ641Q2 1341 aa34.09■■■■□ 3.05
DDX41-202ENST00000503078 HSPA5P11021 654 aaKnown RBP34.08■■■■□ 3.05
DDX41-202ENST00000503078 ZNF608Q9ULD9 1512 aaPredicted RBP34.04■■■■□ 3.04
DDX41-202ENST00000503078 CHIC2Q9UKJ5 165 aa34.04■■■■□ 3.04
DDX41-202ENST00000503078 EIF4G2P78344 907 aaKnown RBP eCLIP34■■■■□ 3.03
DDX41-202ENST00000503078 KDM6BO15054 1643 aa33.99■■■■□ 3.03
DDX41-202ENST00000503078 MIA2Q96PC5 1412 aa33.96■■■■□ 3.03
DDX41-202ENST00000503078 ERCC6Q03468 1493 aa33.96■■■■□ 3.03
DDX41-202ENST00000503078 IQGAP2Q13576 1575 aa33.96■■■■□ 3.03
DDX41-202ENST00000503078 CNTLNQ9NXG0 1405 aa33.95■■■■□ 3.03
DDX41-202ENST00000503078 EPRSP07814 1512 aaKnown RBP33.95■■■■□ 3.02
DDX41-202ENST00000503078 MPHOSPH9Q99550 1183 aa33.94■■■■□ 3.02
DDX41-202ENST00000503078 L3MBTL2Q969R5 705 aa33.87■■■■□ 3.01
DDX41-202ENST00000503078 EIF4G3O43432 1585 aaKnown RBP33.86■■■■□ 3.01
DDX41-202ENST00000503078 NCOA1Q15788 1441 aa33.85■■■■□ 3.01
DDX41-202ENST00000503078 ERICH6BQ5W0A0 696 aa33.84■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms