RNA–Protein interactions for RNA: ENST00000502669.5

SH3TC1-206, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 3,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-206ENST00000502669 HIRIP3Q9BW71 556 aaPredicted RBP21.59■■□□□ 1.05
SH3TC1-206ENST00000502669 FHOD3Q2V2M9 1422 aa21.57■■□□□ 1.04
SH3TC1-206ENST00000502669 RRBP1Q9P2E9 1410 aaKnown RBP21.55■■□□□ 1.04
SH3TC1-206ENST00000502669 NESP48681 1621 aa21.52■■□□□ 1.04
SH3TC1-206ENST00000502669 DDX10Q13206 875 aaKnown RBP21.52■■□□□ 1.03
SH3TC1-206ENST00000502669 TDRD9Q8NDG6 1382 aaKnown RBP21.51■■□□□ 1.03
SH3TC1-206ENST00000502669 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
SH3TC1-206ENST00000502669 FHAD1B1AJZ9 1412 aa21.5■■□□□ 1.03
SH3TC1-206ENST00000502669 PHLDB1Q86UU1 1377 aa21.5■■□□□ 1.03
SH3TC1-206ENST00000502669 MTUS2Q5JR59 1369 aa21.46■■□□□ 1.03
SH3TC1-206ENST00000502669 SETD5Q9C0A6 1442 aa21.46■■□□□ 1.03
SH3TC1-206ENST00000502669 LRRC9Q6ZRR7 1453 aa21.42■■□□□ 1.02
SH3TC1-206ENST00000502669 CHIC2Q9UKJ5 165 aa21.41■■□□□ 1.02
SH3TC1-206ENST00000502669 DNAJC5BQ9UF47 199 aa21.41■■□□□ 1.02
SH3TC1-206ENST00000502669 KCNH8Q96L42 1107 aa21.38■■□□□ 1.01
SH3TC1-206ENST00000502669 TIAM1Q13009 1591 aa21.38■■□□□ 1.01
SH3TC1-206ENST00000502669 TRIM52Q96A61 297 aa21.38■■□□□ 1.01
SH3TC1-206ENST00000502669 POLA1P09884 1462 aaPredicted RBP21.37■■□□□ 1.01
SH3TC1-206ENST00000502669 TOPBP1Q92547 1522 aa21.34■■□□□ 1.01
SH3TC1-206ENST00000502669 BCANQ96GW7 911 aa21.33■■□□□ 1
SH3TC1-206ENST00000502669 RRP7BPQ9NSQ0 103 aa21.32■■□□□ 1
SH3TC1-206ENST00000502669 TONSLQ96HA7 1378 aa21.31■■□□□ 1
SH3TC1-206ENST00000502669 PCF11O94913 1555 aaKnown RBP21.28■■□□□ 1
SH3TC1-206ENST00000502669 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
SH3TC1-206ENST00000502669 FMN1Q68DA7 1419 aa21.24■□□□□ 0.99
SH3TC1-206ENST00000502669 ANP32CO43423 234 aa21.24■□□□□ 0.99
SH3TC1-206ENST00000502669 ABCA10Q8WWZ4 1543 aa21.22■□□□□ 0.99
SH3TC1-206ENST00000502669 CASKIN1Q8WXD9 1431 aa21.19■□□□□ 0.98
SH3TC1-206ENST00000502669 FBLN2P98095 1184 aa21.19■□□□□ 0.98
SH3TC1-206ENST00000502669 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
SH3TC1-206ENST00000502669 SUPT16HQ9Y5B9 1047 aaKnown RBP21.19■□□□□ 0.98
SH3TC1-206ENST00000502669 PDS5BQ9NTI5 1447 aa21.19■□□□□ 0.98
SH3TC1-206ENST00000502669 GAPVD1Q14C86 1478 aa21.19■□□□□ 0.98
SH3TC1-206ENST00000502669 PPP1R15AO75807 674 aaPredicted RBP21.19■□□□□ 0.98
SH3TC1-206ENST00000502669 CNGB1Q14028 1251 aaPredicted RBP21.17■□□□□ 0.98
SH3TC1-206ENST00000502669 MAPKBP1O60336 1514 aa21.17■□□□□ 0.98
SH3TC1-206ENST00000502669 FYCO1Q9BQS8 1478 aa21.16■□□□□ 0.98
SH3TC1-206ENST00000502669 NEFLP07196 543 aa21.15■□□□□ 0.98
SH3TC1-206ENST00000502669 FGD6Q6ZV73 1430 aa21.15■□□□□ 0.98
SH3TC1-206ENST00000502669 MAP3K1Q13233 1512 aa21.15■□□□□ 0.98
SH3TC1-206ENST00000502669 URB2Q14146 1524 aaKnown RBP21.14■□□□□ 0.98
SH3TC1-206ENST00000502669 WDR97A6NE52 1622 aa21.13■□□□□ 0.97
SH3TC1-206ENST00000502669 FKBP8Q14318 412 aa21.11■□□□□ 0.97
SH3TC1-206ENST00000502669 FOXD1Q16676 465 aa21.09■□□□□ 0.97
SH3TC1-206ENST00000502669 EFCAB5A4FU69 1503 aa21.08■□□□□ 0.97
SH3TC1-206ENST00000502669 POLR3GLQ9BT43 218 aa21.08■□□□□ 0.96
SH3TC1-206ENST00000502669 CCDC18Q5T9S5 1454 aa21.08■□□□□ 0.96
SH3TC1-206ENST00000502669 ZNF777Q9ULD5 760 aaPredicted RBP21.08■□□□□ 0.96
SH3TC1-206ENST00000502669 TIMELESSQ9UNS1 1208 aa21.07■□□□□ 0.96
SH3TC1-206ENST00000502669 AQRO60306 1485 aaKnown RBP eCLIP21.06■□□□□ 0.969e-7■■■■■ 31
SH3TC1-206ENST00000502669 NCOA2Q15596 1464 aa21.04■□□□□ 0.96
SH3TC1-206ENST00000502669 ZNF326Q5BKZ1 582 aaKnown RBP21.02■□□□□ 0.95
SH3TC1-206ENST00000502669 CUL7Q14999 1698 aa21.01■□□□□ 0.95
SH3TC1-206ENST00000502669 MYOM3Q5VTT5 1437 aa21■□□□□ 0.95
SH3TC1-206ENST00000502669 PTPRKQ15262 1439 aa21■□□□□ 0.95
SH3TC1-206ENST00000502669 CFAP43Q8NDM7 1665 aa20.99■□□□□ 0.95
SH3TC1-206ENST00000502669 LAMC3Q9Y6N6 1575 aa20.98■□□□□ 0.95
SH3TC1-206ENST00000502669 HNRNPUQ00839 825 aaKnown RBP eCLIP20.96■□□□□ 0.95
SH3TC1-206ENST00000502669 BCL11AQ9H165 835 aa20.95■□□□□ 0.94
SH3TC1-206ENST00000502669 UACAQ9BZF9 1416 aa20.94■□□□□ 0.94
SH3TC1-206ENST00000502669 CHMP7Q8WUX9 453 aaPredicted RBP20.94■□□□□ 0.94
SH3TC1-206ENST00000502669 CDK11AQ9UQ88 783 aaPredicted RBP20.94■□□□□ 0.94
SH3TC1-206ENST00000502669 SNAPC4Q5SXM2 1469 aa20.93■□□□□ 0.94
SH3TC1-206ENST00000502669 SLC4A1APQ9BWU0 796 aaKnown RBP20.93■□□□□ 0.94
SH3TC1-206ENST00000502669 CTTNBP2Q8WZ74 1663 aa20.93■□□□□ 0.94
SH3TC1-206ENST00000502669 MPHOSPH9Q99550 1183 aa20.92■□□□□ 0.94
SH3TC1-206ENST00000502669 HFM1A2PYH4 1435 aa20.92■□□□□ 0.94
SH3TC1-206ENST00000502669 HSPA5P11021 654 aaKnown RBP20.92■□□□□ 0.94
SH3TC1-206ENST00000502669 NAIPQ13075 1403 aa20.92■□□□□ 0.94
SH3TC1-206ENST00000502669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.91■□□□□ 0.948e-7■■■■□ 22.9
SH3TC1-206ENST00000502669 EIF4G2P78344 907 aaKnown RBP eCLIP20.91■□□□□ 0.94
SH3TC1-206ENST00000502669 ZNF644Q9H582 1327 aaPredicted RBP20.9■□□□□ 0.94
SH3TC1-206ENST00000502669 IRX6P78412 446 aaPredicted RBP20.88■□□□□ 0.93
SH3TC1-206ENST00000502669 L3MBTL2Q969R5 705 aa20.87■□□□□ 0.93
SH3TC1-206ENST00000502669 CDK13Q14004 1512 aaKnown RBP20.86■□□□□ 0.93
SH3TC1-206ENST00000502669 CCER2I3L3R5 266 aa20.85■□□□□ 0.93
SH3TC1-206ENST00000502669 FAM9BQ8IZU0 186 aa20.85■□□□□ 0.93
SH3TC1-206ENST00000502669 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
SH3TC1-206ENST00000502669 GRIN2BQ13224 1484 aa20.85■□□□□ 0.93
SH3TC1-206ENST00000502669 EHBP1L1Q8N3D4 1523 aa20.82■□□□□ 0.92
SH3TC1-206ENST00000502669 SUPT6HQ7KZ85 1726 aaKnown RBP20.81■□□□□ 0.92
SH3TC1-206ENST00000502669 PTPN23Q9H3S7 1636 aa20.81■□□□□ 0.92
SH3TC1-206ENST00000502669 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
SH3TC1-206ENST00000502669 ABCA5Q8WWZ7 1642 aa20.79■□□□□ 0.92
SH3TC1-206ENST00000502669 TSHZ2Q9NRE2 1034 aa20.78■□□□□ 0.92
SH3TC1-206ENST00000502669 EPRSP07814 1512 aaKnown RBP20.78■□□□□ 0.92
SH3TC1-206ENST00000502669 SENP3-EIF4A1A0A087X0R7 540 aa20.77■□□□□ 0.91
SH3TC1-206ENST00000502669 ERCC6Q03468 1493 aa20.76■□□□□ 0.91
SH3TC1-206ENST00000502669 ZNF608Q9ULD9 1512 aaPredicted RBP20.76■□□□□ 0.91
SH3TC1-206ENST00000502669 IQGAP2Q13576 1575 aa20.75■□□□□ 0.91
SH3TC1-206ENST00000502669 MRS2Q9HD23 443 aa20.74■□□□□ 0.91
SH3TC1-206ENST00000502669 WASHC2AQ641Q2 1341 aa20.74■□□□□ 0.91
SH3TC1-206ENST00000502669 MAGI3Q5TCQ9 1506 aa20.74■□□□□ 0.91
SH3TC1-206ENST00000502669 SAMD9Q5K651 1589 aa20.73■□□□□ 0.91
SH3TC1-206ENST00000502669 MRC2Q9UBG0 1479 aa20.72■□□□□ 0.91
SH3TC1-206ENST00000502669 UGGT2Q9NYU1 1516 aa20.71■□□□□ 0.91
SH3TC1-206ENST00000502669 KDM2AQ9Y2K7 1162 aa20.7■□□□□ 0.91
SH3TC1-206ENST00000502669 HECW1Q76N89 1606 aa20.7■□□□□ 0.9
SH3TC1-206ENST00000502669 PLEKHD1A6NEE1 506 aa20.68■□□□□ 0.9
SH3TC1-206ENST00000502669 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms