RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-208ENST00000498724 CEP164Q9UPV0 1460 aa6.77□□□□□ -1.33
TNC-208ENST00000498724 MYT1Q01538 1121 aa6.76□□□□□ -1.33
TNC-208ENST00000498724 WDR62O43379 1518 aa6.76□□□□□ -1.33
TNC-208ENST00000498724 NEUROD1Q13562 356 aa6.75□□□□□ -1.33
TNC-208ENST00000498724 POLA2Q14181 598 aa6.74□□□□□ -1.33
TNC-208ENST00000498724 CFTRP13569 1480 aa6.73□□□□□ -1.33
TNC-208ENST00000498724 DIEXFQ68CQ4 756 aaKnown RBP6.73□□□□□ -1.33
TNC-208ENST00000498724 WRNQ14191 1432 aaPredicted RBP eCLIP6.72□□□□□ -1.33
TNC-208ENST00000498724 GTF3C3Q9Y5Q9 886 aa6.71□□□□□ -1.34
TNC-208ENST00000498724 URB2Q14146 1524 aaKnown RBP6.71□□□□□ -1.34
TNC-208ENST00000498724 TOP2AP11388 1531 aaKnown RBP6.69□□□□□ -1.34
TNC-208ENST00000498724 CEP162Q5TB80 1403 aa6.68□□□□□ -1.34
TNC-208ENST00000498724 CCDC88BA6NC98 1476 aa6.68□□□□□ -1.34
TNC-208ENST00000498724 DSG3P32926 999 aa6.67□□□□□ -1.34
TNC-208ENST00000498724 TNIKQ9UKE5 1360 aa6.67□□□□□ -1.34
TNC-208ENST00000498724 EEA1Q15075 1411 aa6.67□□□□□ -1.34
TNC-208ENST00000498724 ZNF316A6NFI3 1004 aaPredicted RBP6.66□□□□□ -1.34
TNC-208ENST00000498724 ABCB7O75027 752 aa6.66□□□□□ -1.34
TNC-208ENST00000498724 CYB5RLQ6IPT4 315 aa6.66□□□□□ -1.34
TNC-208ENST00000498724 TTBK1Q5TCY1 1321 aaPredicted RBP6.66□□□□□ -1.34
TNC-208ENST00000498724 ZNF608Q9ULD9 1512 aaPredicted RBP6.66□□□□□ -1.34
TNC-208ENST00000498724 ABCC8Q09428 1581 aa6.65□□□□□ -1.35
TNC-208ENST00000498724 FKBP8Q14318 412 aa6.64□□□□□ -1.35
TNC-208ENST00000498724 IFT140Q96RY7 1462 aa6.63□□□□□ -1.35
TNC-208ENST00000498724 TOPBP1Q92547 1522 aa6.62□□□□□ -1.35
TNC-208ENST00000498724 AQRO60306 1485 aaKnown RBP eCLIP6.62□□□□□ -1.35
TNC-208ENST00000498724 GOLGA3Q08378 1498 aa6.62□□□□□ -1.35
TNC-208ENST00000498724 PRDM2Q13029 1718 aa6.62□□□□□ -1.35
TNC-208ENST00000498724 RIMBP3CA6NJZ7 1639 aa6.61□□□□□ -1.35
TNC-208ENST00000498724 RIMBP3BA6NNM3 1639 aa6.61□□□□□ -1.35
TNC-208ENST00000498724 RIMBP3Q9UFD9 1639 aa6.61□□□□□ -1.35
TNC-208ENST00000498724 SOGA1O94964 1423 aa6.6□□□□□ -1.35
TNC-208ENST00000498724 UBTFP17480 764 aaKnown RBP6.6□□□□□ -1.35
TNC-208ENST00000498724 YTHDC1Q96MU7 727 aaKnown RBP6.59□□□□□ -1.35
TNC-208ENST00000498724 ARHGEF11O15085 1522 aa6.59□□□□□ -1.35
TNC-208ENST00000498724 TDRD9Q8NDG6 1382 aaKnown RBP6.58□□□□□ -1.36
TNC-208ENST00000498724 SPDYE4A6NLX3 237 aa6.58□□□□□ -1.36
TNC-208ENST00000498724 CHMP7Q8WUX9 453 aaPredicted RBP6.57□□□□□ -1.36
TNC-208ENST00000498724 RAD54L2Q9Y4B4 1467 aa6.57□□□□□ -1.36
TNC-208ENST00000498724 DNMBPQ6XZF7 1577 aa6.57□□□□□ -1.36
TNC-208ENST00000498724 FBXO3Q9UK99 471 aa6.56□□□□□ -1.36
TNC-208ENST00000498724 EIF4G3O43432 1585 aaKnown RBP6.56□□□□□ -1.36
TNC-208ENST00000498724 RUSC2Q8N2Y8 1516 aa6.55□□□□□ -1.36
TNC-208ENST00000498724 KIF21BO75037 1637 aa6.55□□□□□ -1.36
TNC-208ENST00000498724 SPDYE2BA6NHP3 402 aa6.55□□□□□ -1.36
TNC-208ENST00000498724 SPDYE6P0CI01 402 aa6.55□□□□□ -1.36
TNC-208ENST00000498724 SPDYE2Q495Y8 402 aa6.55□□□□□ -1.36
TNC-208ENST00000498724 MIER1Q8N108 512 aa6.55□□□□□ -1.36
TNC-208ENST00000498724 RBM42Q9BTD8 480 aaKnown RBP6.55□□□□□ -1.36
TNC-208ENST00000498724 CHD1O14646 1710 aa6.55□□□□□ -1.36
TNC-208ENST00000498724 TARBP1Q13395 1621 aaKnown RBP6.54□□□□□ -1.36
TNC-208ENST00000498724 POLA1P09884 1462 aaPredicted RBP6.54□□□□□ -1.36
TNC-208ENST00000498724 CLIP1P30622 1438 aa6.54□□□□□ -1.36
TNC-208ENST00000498724 MKRN4PQ13434 485 aaPredicted RBP6.53□□□□□ -1.36
TNC-208ENST00000498724 CLSPNQ9HAW4 1339 aa6.52□□□□□ -1.37
TNC-208ENST00000498724 VPS8Q8N3P4 1428 aa6.52□□□□□ -1.37
TNC-208ENST00000498724 ZNF692Q9BU19 519 aaPredicted RBP6.52□□□□□ -1.37
TNC-208ENST00000498724 ARAP1Q96P48 1450 aa6.52□□□□□ -1.37
TNC-208ENST00000498724 FGD5Q6ZNL6 1462 aa6.51□□□□□ -1.37
TNC-208ENST00000498724 SNAPC4Q5SXM2 1469 aa6.5□□□□□ -1.37
TNC-208ENST00000498724 CUX1P39880 1505 aa6.49□□□□□ -1.37
TNC-208ENST00000498724 SYNJ1O43426 1573 aa6.48□□□□□ -1.37
TNC-208ENST00000498724 GRIN2BQ13224 1484 aa6.47□□□□□ -1.37
TNC-208ENST00000498724 STAG3Q9UJ98 1225 aa6.46□□□□□ -1.38
TNC-208ENST00000498724 SYNJ2O15056 1496 aa6.46□□□□□ -1.38
TNC-208ENST00000498724 GAPVD1Q14C86 1478 aa6.46□□□□□ -1.38
TNC-208ENST00000498724 MAGI1Q96QZ7 1491 aaPredicted RBP6.46□□□□□ -1.38
TNC-208ENST00000498724 RAPGEF2Q9Y4G8 1499 aa6.45□□□□□ -1.38
TNC-208ENST00000498724 CLASP1Q7Z460 1538 aa6.45□□□□□ -1.38
TNC-208ENST00000498724 DHX57Q6P158 1386 aaKnown RBP6.44□□□□□ -1.38
TNC-208ENST00000498724 PLEKHG5O94827 1062 aa6.42□□□□□ -1.38
TNC-208ENST00000498724 SSUH2Q9Y2M2 353 aa6.42□□□□□ -1.38
TNC-208ENST00000498724 SUPT16HQ9Y5B9 1047 aaKnown RBP6.42□□□□□ -1.38
TNC-208ENST00000498724 WDR97A6NE52 1622 aa6.42□□□□□ -1.38
TNC-208ENST00000498724 PBRM1Q86U86 1689 aa6.42□□□□□ -1.38
TNC-208ENST00000498724 ERICH3Q5RHP9 1530 aa6.41□□□□□ -1.38
TNC-208ENST00000498724 RANGAP1P46060 587 aaPredicted RBP6.41□□□□□ -1.38
TNC-208ENST00000498724 PROM2Q8N271 834 aa6.41□□□□□ -1.38
TNC-208ENST00000498724 AKT1S1Q96B36 256 aa6.41□□□□□ -1.38
TNC-208ENST00000498724 ABCA10Q8WWZ4 1543 aa6.4□□□□□ -1.38
TNC-208ENST00000498724 TOP2BQ02880 1626 aa6.4□□□□□ -1.38
TNC-208ENST00000498724 JPH4Q96JJ6 628 aa6.39□□□□□ -1.39
TNC-208ENST00000498724 RRBP1Q9P2E9 1410 aaKnown RBP6.39□□□□□ -1.39
TNC-208ENST00000498724 GRIN2AQ12879 1464 aa6.39□□□□□ -1.39
TNC-208ENST00000498724 ERCC6L2Q5T890 1561 aa6.39□□□□□ -1.39
TNC-208ENST00000498724 NPM1P06748 294 aaKnown RBP eCLIP6.38□□□□□ -1.39
TNC-208ENST00000498724 ABCA5Q8WWZ7 1642 aa6.38□□□□□ -1.39
TNC-208ENST00000498724 BIVM-ERCC5R4GMW8 1640 aa6.38□□□□□ -1.39
TNC-208ENST00000498724 PRXQ9BXM0 1461 aa6.37□□□□□ -1.39
TNC-208ENST00000498724 TSHZ2Q9NRE2 1034 aa6.37□□□□□ -1.39
TNC-208ENST00000498724 CEP170Q5SW79 1584 aa6.36□□□□□ -1.39
TNC-208ENST00000498724 FHAD1B1AJZ9 1412 aa6.36□□□□□ -1.39
TNC-208ENST00000498724 CCNB3Q8WWL7 1395 aa6.36□□□□□ -1.39
TNC-208ENST00000498724 SPDYE1Q8NFV5 336 aaPredicted RBP6.36□□□□□ -1.39
TNC-208ENST00000498724 NUP160Q12769 1436 aa6.35□□□□□ -1.39
TNC-208ENST00000498724 PRG4Q92954 1404 aaPredicted RBP6.35□□□□□ -1.39
TNC-208ENST00000498724 FAM69CQ0P6D2 419 aa6.35□□□□□ -1.39
TNC-208ENST00000498724 KANK4Q5T7N3 995 aaPredicted RBP6.35□□□□□ -1.39
TNC-208ENST00000498724 ANP32EQ9BTT0 268 aa6.35□□□□□ -1.39
TNC-208ENST00000498724 ZBTB47Q9UFB7 747 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms