RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-208ENST00000498724 AEBP2Q6ZN18 517 aaPredicted RBP11.13□□□□□ -0.63
TNC-208ENST00000498724 CHIC1Q5VXU3 224 aa11.12□□□□□ -0.63
TNC-208ENST00000498724 SENP3Q9H4L4 574 aaPredicted RBP9.68□□□□□ -0.86
TNC-208ENST00000498724 PHF23Q9BUL5 403 aaPredicted RBP9.65□□□□□ -0.86
TNC-208ENST00000498724 PLPPR3Q6T4P5 718 aa9.18□□□□□ -0.94
TNC-208ENST00000498724 NISCHQ9Y2I1 1504 aa8.95□□□□□ -0.98
TNC-208ENST00000498724 FOXD1Q16676 465 aa8.81□□□□□ -1
TNC-208ENST00000498724 ADRA2BP18089 450 aa8.53□□□□□ -1.04
TNC-208ENST00000498724 PPP6R1Q9UPN7 881 aa8.47□□□□□ -1.05
TNC-208ENST00000498724 PIAS4Q8N2W9 510 aaPredicted RBP8.43□□□□□ -1.06
TNC-208ENST00000498724 MSH5O43196 834 aa8.29□□□□□ -1.08
TNC-208ENST00000498724 ABCC9O60706 1549 aa8.18□□□□□ -1.1
TNC-208ENST00000498724 SCAF1Q9H7N4 1312 aaKnown RBP8.09□□□□□ -1.11
TNC-208ENST00000498724 NCBP3Q53F19 620 aaKnown RBP8.01□□□□□ -1.13
TNC-208ENST00000498724 PPP4R3CPQ6ZMV5 832 aa8.01□□□□□ -1.13
TNC-208ENST00000498724 CCDC180Q9P1Z9 1646 aa7.99□□□□□ -1.13
TNC-208ENST00000498724 KCNA4P22459 653 aa7.86□□□□□ -1.15
TNC-208ENST00000498724 CNKSR2Q8WXI2 1034 aa7.84□□□□□ -1.15
TNC-208ENST00000498724 DCAF8L2P0C7V8 631 aa7.78□□□□□ -1.16
TNC-208ENST00000498724 DNAJC5BQ9UF47 199 aa7.78□□□□□ -1.16
TNC-208ENST00000498724 RB1CC1Q8TDY2 1594 aa7.69□□□□□ -1.18
TNC-208ENST00000498724 NPM3O75607 178 aaKnown RBP7.69□□□□□ -1.18
TNC-208ENST00000498724 DMRT2Q9Y5R5 561 aa7.68□□□□□ -1.18
TNC-208ENST00000498724 PABPN1Q86U42 306 aaKnown RBP eCLIP7.67□□□□□ -1.18
TNC-208ENST00000498724 MAPK8IP2Q13387 824 aaPredicted RBP7.66□□□□□ -1.18
TNC-208ENST00000498724 RNF216Q9NWF9 866 aaPredicted RBP7.66□□□□□ -1.18
TNC-208ENST00000498724 SLC4A1APQ9BWU0 796 aaKnown RBP7.61□□□□□ -1.19
TNC-208ENST00000498724 NACADO15069 1562 aa7.61□□□□□ -1.19
TNC-208ENST00000498724 HOXD11P31277 338 aaPredicted RBP7.55□□□□□ -1.2
TNC-208ENST00000498724 SHROOM4Q9ULL8 1493 aa7.53□□□□□ -1.2
TNC-208ENST00000498724 UNC13AQ9UPW8 1703 aa7.51□□□□□ -1.21
TNC-208ENST00000498724 BICRAQ9NZM4 1560 aa7.46□□□□□ -1.22
TNC-208ENST00000498724 SUPT5HO00267 1087 aaKnown RBP7.45□□□□□ -1.22
TNC-208ENST00000498724 EHMT2Q96KQ7 1210 aa7.44□□□□□ -1.22
TNC-208ENST00000498724 MYO15BQ96JP2 1530 aa7.43□□□□□ -1.22
TNC-208ENST00000498724 ZCCHC6Q5VYS8 1495 aaKnown RBP7.4□□□□□ -1.22
TNC-208ENST00000498724 DCAF8L1A6NGE4 600 aa7.39□□□□□ -1.23
TNC-208ENST00000498724 HRCP23327 699 aa7.39□□□□□ -1.23
TNC-208ENST00000498724 CECR2Q9BXF3 1484 aa7.35□□□□□ -1.23
TNC-208ENST00000498724 SCRIBQ14160 1630 aa7.34□□□□□ -1.23
TNC-208ENST00000498724 CC2D2AQ9P2K1 1620 aa7.34□□□□□ -1.23
TNC-208ENST00000498724 FOXD4L1Q9NU39 408 aa7.33□□□□□ -1.24
TNC-208ENST00000498724 DCAF1Q9Y4B6 1507 aa7.32□□□□□ -1.24
TNC-208ENST00000498724 EIF4G1Q04637 1599 aaKnown RBP7.29□□□□□ -1.24
TNC-208ENST00000498724 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.27□□□□□ -1.25
TNC-208ENST00000498724 CSRNP3Q8WYN3 585 aa7.26□□□□□ -1.25
TNC-208ENST00000498724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.25□□□□□ -1.25
TNC-208ENST00000498724 HNRNPUL2Q1KMD3 747 aaKnown RBP7.25□□□□□ -1.25
TNC-208ENST00000498724 PCGF6Q9BYE7 350 aa7.25□□□□□ -1.25
TNC-208ENST00000498724 MYCNP04198 464 aaPredicted RBP7.21□□□□□ -1.26
TNC-208ENST00000498724 APLP2Q06481 763 aa7.21□□□□□ -1.26
TNC-208ENST00000498724 POTEDQ86YR6 584 aa7.21□□□□□ -1.26
TNC-208ENST00000498724 PPARGC1BQ86YN6 1023 aaKnown RBP7.17□□□□□ -1.26
TNC-208ENST00000498724 DNAJC5Q9H3Z4 198 aa7.17□□□□□ -1.26
TNC-208ENST00000498724 SLC4A2P04920 1241 aa7.16□□□□□ -1.26
TNC-208ENST00000498724 SAMD1Q6SPF0 538 aaPredicted RBP7.16□□□□□ -1.26
TNC-208ENST00000498724 ZBTB22O15209 634 aa7.13□□□□□ -1.27
TNC-208ENST00000498724 ATXN8OSP0DMR3 200 aa7.13□□□□□ -1.27
TNC-208ENST00000498724 TRIM26Q12899 539 aaPredicted RBP7.1□□□□□ -1.27
TNC-208ENST00000498724 LOC105371045A0A1W2PR82 267 aa7.08□□□□□ -1.28
TNC-208ENST00000498724 ZEB1P37275 1124 aaPredicted RBP7.08□□□□□ -1.28
TNC-208ENST00000498724 NCAPD3P42695 1498 aa7.05□□□□□ -1.28
TNC-208ENST00000498724 ERCC6Q03468 1493 aa7.05□□□□□ -1.28
TNC-208ENST00000498724 PELP1Q8IZL8 1130 aaKnown RBP7.04□□□□□ -1.28
TNC-208ENST00000498724 U3KPZ7 1027 aaPredicted RBP7.04□□□□□ -1.28
TNC-208ENST00000498724 ATAD2BQ9ULI0 1458 aa7.03□□□□□ -1.28
TNC-208ENST00000498724 C1QBPQ07021 282 aaKnown RBP7.02□□□□□ -1.29
TNC-208ENST00000498724 CUX2O14529 1486 aa7□□□□□ -1.29
TNC-208ENST00000498724 NESP48681 1621 aa7□□□□□ -1.29
TNC-208ENST00000498724 RNF39Q9H2S5 420 aa6.99□□□□□ -1.29
TNC-208ENST00000498724 SMARCA4P51532 1647 aa6.98□□□□□ -1.29
TNC-208ENST00000498724 SMARCA2P51531 1590 aa6.97□□□□□ -1.29
TNC-208ENST00000498724 ZNF219Q9P2Y4 722 aaPredicted RBP6.96□□□□□ -1.3
TNC-208ENST00000498724 BAZ1BQ9UIG0 1483 aaKnown RBP6.96□□□□□ -1.3
TNC-208ENST00000498724 RSF1Q96T23 1441 aaPredicted RBP6.94□□□□□ -1.3
TNC-208ENST00000498724 TRIM41Q8WV44 630 aa6.94□□□□□ -1.3
TNC-208ENST00000498724 HMGXB3Q12766 1538 aa6.94□□□□□ -1.3
TNC-208ENST00000498724 BAZ1AQ9NRL2 1556 aaPredicted RBP6.93□□□□□ -1.3
TNC-208ENST00000498724 MROH2BQ7Z745 1585 aa6.91□□□□□ -1.3
TNC-208ENST00000498724 CAPN15O75808 1086 aa6.89□□□□□ -1.31
TNC-208ENST00000498724 FAM9AQ8IZU1 332 aaPredicted RBP6.89□□□□□ -1.31
TNC-208ENST00000498724 PDS5BQ9NTI5 1447 aa6.89□□□□□ -1.31
TNC-208ENST00000498724 LAMC3Q9Y6N6 1575 aa6.87□□□□□ -1.31
TNC-208ENST00000498724 PEG3Q9GZU2 1588 aa6.86□□□□□ -1.31
TNC-208ENST00000498724 CADPSQ9ULU8 1353 aa6.86□□□□□ -1.31
TNC-208ENST00000498724 KIF21AQ7Z4S6 1674 aa6.86□□□□□ -1.31
TNC-208ENST00000498724 THOC2Q8NI27 1593 aaKnown RBP6.86□□□□□ -1.31
TNC-208ENST00000498724 TRHP20396 242 aaPredicted RBP6.85□□□□□ -1.31
TNC-208ENST00000498724 WIZO95785 1651 aa6.84□□□□□ -1.32
TNC-208ENST00000498724 ZBTB12Q9Y330 459 aaPredicted RBP6.83□□□□□ -1.32
TNC-208ENST00000498724 CACNB1Q02641 598 aaPredicted RBP6.81□□□□□ -1.32
TNC-208ENST00000498724 ACIN1Q9UKV3 1341 aaKnown RBP6.8□□□□□ -1.32
TNC-208ENST00000498724 MRC2Q9UBG0 1479 aa6.8□□□□□ -1.32
TNC-208ENST00000498724 CCER1Q8TC90 406 aaPredicted RBP6.8□□□□□ -1.32
TNC-208ENST00000498724 FBLN2P98095 1184 aa6.79□□□□□ -1.32
TNC-208ENST00000498724 ATF5Q9Y2D1 282 aaPredicted RBP6.79□□□□□ -1.32
TNC-208ENST00000498724 CENPBP07199 599 aaPredicted RBP6.78□□□□□ -1.32
TNC-208ENST00000498724 OSCARQ8IYS5 282 aa6.78□□□□□ -1.32
TNC-208ENST00000498724 SPINK5Q9NQ38 1064 aaPredicted RBP6.77□□□□□ -1.33
TNC-208ENST00000498724 FANCD2Q9BXW9 1451 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms