RNA–Protein interactions for RNA: ENST00000498627.1

PUM1-212, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-212ENST00000498627 AQRO60306 1485 aaKnown RBP eCLIP13.83□□□□□ -0.28e-7■■■■□ 25
PUM1-212ENST00000498627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.77□□□□□ -0.212e-7■□□□□ 8
PUM1-212ENST00000498627 ABCA10Q8WWZ4 1543 aa13.75□□□□□ -0.21
PUM1-212ENST00000498627 ARAP1Q96P48 1450 aa13.75□□□□□ -0.21
PUM1-212ENST00000498627 EIF4G3O43432 1585 aaKnown RBP13.75□□□□□ -0.21
PUM1-212ENST00000498627 WDR97A6NE52 1622 aa13.73□□□□□ -0.21
PUM1-212ENST00000498627 GAPVD1Q14C86 1478 aa13.71□□□□□ -0.21
PUM1-212ENST00000498627 FBLN2P98095 1184 aa13.68□□□□□ -0.22
PUM1-212ENST00000498627 RUSC2Q8N2Y8 1516 aa13.68□□□□□ -0.22
PUM1-212ENST00000498627 ABCA5Q8WWZ7 1642 aa13.67□□□□□ -0.22
PUM1-212ENST00000498627 GRIN2BQ13224 1484 aa13.67□□□□□ -0.22
PUM1-212ENST00000498627 SNAPC4Q5SXM2 1469 aa13.66□□□□□ -0.22
PUM1-212ENST00000498627 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
PUM1-212ENST00000498627 KIF27Q86VH2 1401 aa13.64□□□□□ -0.23
PUM1-212ENST00000498627 PBRM1Q86U86 1689 aa13.63□□□□□ -0.23
PUM1-212ENST00000498627 FAM9AQ8IZU1 332 aaPredicted RBP13.62□□□□□ -0.23
PUM1-212ENST00000498627 IGF1RP08069 1367 aa13.61□□□□□ -0.23
PUM1-212ENST00000498627 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
PUM1-212ENST00000498627 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
PUM1-212ENST00000498627 CHD1O14646 1710 aa13.59□□□□□ -0.23
PUM1-212ENST00000498627 MAGI1Q96QZ7 1491 aaPredicted RBP13.58□□□□□ -0.24
PUM1-212ENST00000498627 ERICH3Q5RHP9 1530 aa13.56□□□□□ -0.24
PUM1-212ENST00000498627 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
PUM1-212ENST00000498627 FHAD1B1AJZ9 1412 aa13.54□□□□□ -0.24
PUM1-212ENST00000498627 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
PUM1-212ENST00000498627 CARMIL1Q5VZK9 1371 aa13.53□□□□□ -0.24
PUM1-212ENST00000498627 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
PUM1-212ENST00000498627 GRIN2AQ12879 1464 aa13.49□□□□□ -0.25
PUM1-212ENST00000498627 ILDR1Q86SU0 546 aaPredicted RBP13.48□□□□□ -0.25
PUM1-212ENST00000498627 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
PUM1-212ENST00000498627 CUL7Q14999 1698 aa13.45□□□□□ -0.26
PUM1-212ENST00000498627 CEP170Q5SW79 1584 aa13.44□□□□□ -0.26
PUM1-212ENST00000498627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.43□□□□□ -0.26
PUM1-212ENST00000498627 HNRNPUL2Q1KMD3 747 aaKnown RBP13.43□□□□□ -0.26
PUM1-212ENST00000498627 RAPGEF2Q9Y4G8 1499 aa13.42□□□□□ -0.26
PUM1-212ENST00000498627 NUP160Q12769 1436 aa13.42□□□□□ -0.26
PUM1-212ENST00000498627 EEA1Q15075 1411 aa13.42□□□□□ -0.26
PUM1-212ENST00000498627 PRXQ9BXM0 1461 aa13.42□□□□□ -0.26
PUM1-212ENST00000498627 SAMD1Q6SPF0 538 aaPredicted RBP13.41□□□□□ -0.26
PUM1-212ENST00000498627 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
PUM1-212ENST00000498627 JPH4Q96JJ6 628 aa13.36□□□□□ -0.27
PUM1-212ENST00000498627 RANGAP1P46060 587 aaPredicted RBP13.34□□□□□ -0.27
PUM1-212ENST00000498627 KIAA0586Q9BVV6 1533 aa13.34□□□□□ -0.27
PUM1-212ENST00000498627 UBTFP17480 764 aaKnown RBP13.32□□□□□ -0.28
PUM1-212ENST00000498627 ERCC6L2Q5T890 1561 aa13.32□□□□□ -0.28
PUM1-212ENST00000498627 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
PUM1-212ENST00000498627 TTBK1Q5TCY1 1321 aaPredicted RBP13.3□□□□□ -0.28
PUM1-212ENST00000498627 PRG4Q92954 1404 aaPredicted RBP13.3□□□□□ -0.28
PUM1-212ENST00000498627 KIF21BO75037 1637 aa13.29□□□□□ -0.28
PUM1-212ENST00000498627 LOC105371045A0A1W2PR82 267 aa13.29□□□□□ -0.28
PUM1-212ENST00000498627 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
PUM1-212ENST00000498627 IQGAP2Q13576 1575 aa13.27□□□□□ -0.29
PUM1-212ENST00000498627 SHROOM2Q13796 1616 aa13.27□□□□□ -0.29
PUM1-212ENST00000498627 APLP2Q06481 763 aa13.26□□□□□ -0.29
PUM1-212ENST00000498627 GOLGA3Q08378 1498 aa13.26□□□□□ -0.29
PUM1-212ENST00000498627 P3H3Q8IVL6 736 aa13.26□□□□□ -0.29
PUM1-212ENST00000498627 CTTNBP2Q8WZ74 1663 aa13.24□□□□□ -0.29
PUM1-212ENST00000498627 KDM4FA0A1W2PPD8 638 aa13.23□□□□□ -0.29
PUM1-212ENST00000498627 KIF13AQ9H1H9 1805 aa13.23□□□□□ -0.29
PUM1-212ENST00000498627 DISP1Q96F81 1524 aa13.2□□□□□ -0.3
PUM1-212ENST00000498627 UGGT2Q9NYU1 1516 aa13.2□□□□□ -0.3
PUM1-212ENST00000498627 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
PUM1-212ENST00000498627 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
PUM1-212ENST00000498627 ABCC10Q5T3U5 1492 aa13.17□□□□□ -0.3
PUM1-212ENST00000498627 CARMIL2Q6F5E8 1435 aa13.17□□□□□ -0.3
PUM1-212ENST00000498627 FAM69CQ0P6D2 419 aa13.16□□□□□ -0.3
PUM1-212ENST00000498627 TNIKQ9UKE5 1360 aa13.16□□□□□ -0.3
PUM1-212ENST00000498627 PTPRGP23470 1445 aa13.15□□□□□ -0.3
PUM1-212ENST00000498627 KDM6BO15054 1643 aa13.15□□□□□ -0.3
PUM1-212ENST00000498627 KIAA0556O60303 1618 aa13.14□□□□□ -0.31
PUM1-212ENST00000498627 MAPKBP1O60336 1514 aa13.13□□□□□ -0.31
PUM1-212ENST00000498627 FHOD3Q2V2M9 1422 aa13.13□□□□□ -0.31
PUM1-212ENST00000498627 FBXO41Q8TF61 875 aa13.1□□□□□ -0.31
PUM1-212ENST00000498627 SAMD9Q5K651 1589 aa13.1□□□□□ -0.31
PUM1-212ENST00000498627 ARID3CA6NKF2 412 aa13.09□□□□□ -0.31
PUM1-212ENST00000498627 CAPN15O75808 1086 aa13.09□□□□□ -0.31
PUM1-212ENST00000498627 ARHGAP35Q9NRY4 1499 aa13.09□□□□□ -0.31
PUM1-212ENST00000498627 ZNF219Q9P2Y4 722 aaPredicted RBP13.07□□□□□ -0.32
PUM1-212ENST00000498627 CLIP1P30622 1438 aa13.06□□□□□ -0.32
PUM1-212ENST00000498627 PLB1Q6P1J6 1458 aa13.06□□□□□ -0.32
PUM1-212ENST00000498627 DIP2BQ9P265 1576 aa13.06□□□□□ -0.32
PUM1-212ENST00000498627 UACAQ9BZF9 1416 aa13.05□□□□□ -0.32
PUM1-212ENST00000498627 CEP162Q5TB80 1403 aa13.05□□□□□ -0.32
PUM1-212ENST00000498627 ADCY10Q96PN6 1610 aa13.04□□□□□ -0.32
PUM1-212ENST00000498627 EFCAB5A4FU69 1503 aa13.03□□□□□ -0.32
PUM1-212ENST00000498627 ATP1B4Q9UN42 357 aaPredicted RBP13.03□□□□□ -0.32
PUM1-212ENST00000498627 HECW2Q9P2P5 1572 aa13.01□□□□□ -0.33
PUM1-212ENST00000498627 ABCA8O94911 1581 aa13□□□□□ -0.33
PUM1-212ENST00000498627 ADGRL1O94910 1474 aa13□□□□□ -0.33
PUM1-212ENST00000498627 CACNB1Q02641 598 aaPredicted RBP13□□□□□ -0.33
PUM1-212ENST00000498627 ABCC2Q92887 1545 aa12.99□□□□□ -0.33
PUM1-212ENST00000498627 UHRF1BP1LA0JNW5 1464 aa12.98□□□□□ -0.33
PUM1-212ENST00000498627 RAPGEF6Q8TEU7 1601 aa12.95□□□□□ -0.34
PUM1-212ENST00000498627 FMN1Q68DA7 1419 aa12.95□□□□□ -0.34
PUM1-212ENST00000498627 KDM5BQ9UGL1 1544 aa12.94□□□□□ -0.34
PUM1-212ENST00000498627 ATP10BO94823 1461 aa12.94□□□□□ -0.34
PUM1-212ENST00000498627 NUP153P49790 1475 aaKnown RBP12.94□□□□□ -0.34
PUM1-212ENST00000498627 ZCCHC11Q5TAX3 1644 aaKnown RBP12.92□□□□□ -0.34
PUM1-212ENST00000498627 KCNH8Q96L42 1107 aa12.92□□□□□ -0.34
PUM1-212ENST00000498627 ASXL2Q76L83 1435 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms