RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 PEG3Q9GZU2 1588 aa15.14■□□□□ 0.01
PUDP-205ENST00000498474 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
PUDP-205ENST00000498474 WIZO95785 1651 aa15.08■□□□□ 0
PUDP-205ENST00000498474 C19orf67A6NJJ6 358 aa15.06■□□□□ 0
PUDP-205ENST00000498474 CUX2O14529 1486 aa15□□□□□ -0.01
PUDP-205ENST00000498474 FARP1Q9Y4F1 1045 aaPredicted RBP14.97□□□□□ -0.01
PUDP-205ENST00000498474 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
PUDP-205ENST00000498474 LAMC3Q9Y6N6 1575 aa14.95□□□□□ -0.02
PUDP-205ENST00000498474 STAG3Q9UJ98 1225 aa14.94□□□□□ -0.02
PUDP-205ENST00000498474 THOC2Q8NI27 1593 aaKnown RBP14.93□□□□□ -0.02
PUDP-205ENST00000498474 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
PUDP-205ENST00000498474 DNAJC5Q9H3Z4 198 aa14.92□□□□□ -0.02
PUDP-205ENST00000498474 CREBZFQ9NS37 354 aa14.92□□□□□ -0.02
PUDP-205ENST00000498474 CADPSQ9ULU8 1353 aa14.88□□□□□ -0.03
PUDP-205ENST00000498474 PDS5BQ9NTI5 1447 aa14.86□□□□□ -0.03
PUDP-205ENST00000498474 CD44P16070 742 aaKnown RBP14.85□□□□□ -0.03
PUDP-205ENST00000498474 GABBR2O75899 941 aa14.83□□□□□ -0.04
PUDP-205ENST00000498474 PROM2Q8N271 834 aa14.82□□□□□ -0.04
PUDP-205ENST00000498474 TOP2AP11388 1531 aaKnown RBP14.81□□□□□ -0.04
PUDP-205ENST00000498474 MRC2Q9UBG0 1479 aa14.76□□□□□ -0.05
PUDP-205ENST00000498474 CFTRP13569 1480 aa14.73□□□□□ -0.05
PUDP-205ENST00000498474 FANCD2Q9BXW9 1451 aa14.73□□□□□ -0.05
PUDP-205ENST00000498474 CEP164Q9UPV0 1460 aa14.72□□□□□ -0.05
PUDP-205ENST00000498474 WDR62O43379 1518 aa14.71□□□□□ -0.06
PUDP-205ENST00000498474 MNX1P50219 401 aaPredicted RBP14.69□□□□□ -0.06
PUDP-205ENST00000498474 CCDC88BA6NC98 1476 aa14.69□□□□□ -0.06
PUDP-205ENST00000498474 ZRANB1Q9UGI0 708 aa14.67□□□□□ -0.06
PUDP-205ENST00000498474 URB2Q14146 1524 aaKnown RBP14.63□□□□□ -0.07
PUDP-205ENST00000498474 PRDM2Q13029 1718 aa14.62□□□□□ -0.07
PUDP-205ENST00000498474 ZNF579Q8NAF0 562 aaKnown RBP14.6□□□□□ -0.07
PUDP-205ENST00000498474 FKBP8Q14318 412 aa14.58□□□□□ -0.08
PUDP-205ENST00000498474 NPM1P06748 294 aaKnown RBP eCLIP14.56□□□□□ -0.08
PUDP-205ENST00000498474 POTEIP0CG38 1075 aa14.56□□□□□ -0.08
PUDP-205ENST00000498474 PHF12Q96QT6 1004 aa14.52□□□□□ -0.09
PUDP-205ENST00000498474 GALR2O43603 387 aaPredicted RBP14.48□□□□□ -0.09
PUDP-205ENST00000498474 PAK3O75914 559 aaPredicted RBP14.48□□□□□ -0.09
PUDP-205ENST00000498474 CLCN6P51797 869 aa14.48□□□□□ -0.09
PUDP-205ENST00000498474 MIER1Q8N108 512 aa14.48□□□□□ -0.09
PUDP-205ENST00000498474 TOPBP1Q92547 1522 aa14.47□□□□□ -0.09
PUDP-205ENST00000498474 ZNF608Q9ULD9 1512 aaPredicted RBP14.46□□□□□ -0.1
PUDP-205ENST00000498474 SUPT5HO00267 1087 aaKnown RBP14.45□□□□□ -0.1
PUDP-205ENST00000498474 TRIM41Q8WV44 630 aa14.42□□□□□ -0.1
PUDP-205ENST00000498474 DCBLD2Q96PD2 775 aa14.42□□□□□ -0.1
PUDP-205ENST00000498474 TSPYL2Q9H2G4 693 aaPredicted RBP14.41□□□□□ -0.1
PUDP-205ENST00000498474 DNMBPQ6XZF7 1577 aa14.41□□□□□ -0.1
PUDP-205ENST00000498474 IFT140Q96RY7 1462 aa14.4□□□□□ -0.1
PUDP-205ENST00000498474 LHX8Q68G74 356 aa14.37□□□□□ -0.11
PUDP-205ENST00000498474 ABCC8Q09428 1581 aa14.36□□□□□ -0.11
PUDP-205ENST00000498474 PLCD3Q8N3E9 789 aa14.36□□□□□ -0.11
PUDP-205ENST00000498474 PLEKHG5O94827 1062 aa14.35□□□□□ -0.11
PUDP-205ENST00000498474 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
PUDP-205ENST00000498474 AQRO60306 1485 aaKnown RBP eCLIP14.34□□□□□ -0.11
PUDP-205ENST00000498474 RAD54L2Q9Y4B4 1467 aa14.34□□□□□ -0.11
PUDP-205ENST00000498474 TARBP1Q13395 1621 aaKnown RBP14.33□□□□□ -0.11
PUDP-205ENST00000498474 POLA1P09884 1462 aaPredicted RBP14.33□□□□□ -0.12
PUDP-205ENST00000498474 RASEFQ8IZ41 740 aa14.31□□□□□ -0.12
PUDP-205ENST00000498474 MS4A3Q96HJ5 214 aa14.3□□□□□ -0.12
PUDP-205ENST00000498474 CCDC61Q9Y6R9 512 aa14.3□□□□□ -0.12
PUDP-205ENST00000498474 CUX1P39880 1505 aa14.29□□□□□ -0.12
PUDP-205ENST00000498474 FGD5Q6ZNL6 1462 aa14.27□□□□□ -0.12
PUDP-205ENST00000498474 SOGA1O94964 1423 aa14.27□□□□□ -0.12
PUDP-205ENST00000498474 TDRD9Q8NDG6 1382 aaKnown RBP14.27□□□□□ -0.12
PUDP-205ENST00000498474 CHD1O14646 1710 aa14.27□□□□□ -0.13
PUDP-205ENST00000498474 RIMBP3CA6NJZ7 1639 aa14.23□□□□□ -0.13
PUDP-205ENST00000498474 RIMBP3BA6NNM3 1639 aa14.23□□□□□ -0.13
PUDP-205ENST00000498474 RIMBP3Q9UFD9 1639 aa14.23□□□□□ -0.13
PUDP-205ENST00000498474 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
PUDP-205ENST00000498474 KIF12Q96FN5 646 aa14.21□□□□□ -0.13
PUDP-205ENST00000498474 NUBP1P53384 320 aa14.19□□□□□ -0.14
PUDP-205ENST00000498474 SNAPC4Q5SXM2 1469 aa14.17□□□□□ -0.14
PUDP-205ENST00000498474 ARHGEF11O15085 1522 aa14.16□□□□□ -0.14
PUDP-205ENST00000498474 WDR97A6NE52 1622 aa14.16□□□□□ -0.14
PUDP-205ENST00000498474 MAP3K13O43283 966 aa14.15□□□□□ -0.14
PUDP-205ENST00000498474 ZBTB47Q9UFB7 747 aaPredicted RBP14.15□□□□□ -0.14
PUDP-205ENST00000498474 TRPC6Q9Y210 931 aa14.14□□□□□ -0.15
PUDP-205ENST00000498474 ATMINO43313 823 aaPredicted RBP14.13□□□□□ -0.15
PUDP-205ENST00000498474 ASTLQ6HA08 431 aaPredicted RBP14.13□□□□□ -0.15
PUDP-205ENST00000498474 FBXO3Q9UK99 471 aa14.13□□□□□ -0.15
PUDP-205ENST00000498474 PBRM1Q86U86 1689 aa14.12□□□□□ -0.15
PUDP-205ENST00000498474 POTEB2H3BUK9 544 aa14.11□□□□□ -0.15
PUDP-205ENST00000498474 CYB5RLQ6IPT4 315 aa14.11□□□□□ -0.15
PUDP-205ENST00000498474 CHMP7Q8WUX9 453 aaPredicted RBP14.1□□□□□ -0.15
PUDP-205ENST00000498474 GRIN2BQ13224 1484 aa14.1□□□□□ -0.15
PUDP-205ENST00000498474 GAPVD1Q14C86 1478 aa14.09□□□□□ -0.15
PUDP-205ENST00000498474 SYNJ1O43426 1573 aa14.09□□□□□ -0.15
PUDP-205ENST00000498474 ABCA10Q8WWZ4 1543 aa14.07□□□□□ -0.16
PUDP-205ENST00000498474 MAGI1Q96QZ7 1491 aaPredicted RBP14.06□□□□□ -0.16
PUDP-205ENST00000498474 ABCA5Q8WWZ7 1642 aa14.06□□□□□ -0.16
PUDP-205ENST00000498474 ATN1P54259 1190 aaPredicted RBP14.06□□□□□ -0.16
PUDP-205ENST00000498474 WRNQ14191 1432 aaPredicted RBP eCLIP14.06□□□□□ -0.16
PUDP-205ENST00000498474 BIVM-ERCC5R4GMW8 1640 aa14.05□□□□□ -0.16
PUDP-205ENST00000498474 ARAP1Q96P48 1450 aa14.05□□□□□ -0.16
PUDP-205ENST00000498474 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
PUDP-205ENST00000498474 VASPP50552 380 aaPredicted RBP14.04□□□□□ -0.16
PUDP-205ENST00000498474 BMP2KQ9NSY1 1161 aaPredicted RBP14.04□□□□□ -0.16
PUDP-205ENST00000498474 SYNJ2O15056 1496 aa14.04□□□□□ -0.16
PUDP-205ENST00000498474 FAM212AQ96EL1 285 aa14.03□□□□□ -0.16
PUDP-205ENST00000498474 CLASP1Q7Z460 1538 aa14.03□□□□□ -0.16
PUDP-205ENST00000498474 METRNQ9UJH8 293 aa14.02□□□□□ -0.17
PUDP-205ENST00000498474 PCDHB13Q9Y5F0 798 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms