RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 AEBP2Q6ZN18 517 aaPredicted RBP29.02■■■□□ 2.24
PUDP-205ENST00000498474 CHIC1Q5VXU3 224 aa27.59■■■□□ 2.01
PUDP-205ENST00000498474 SENP3Q9H4L4 574 aaPredicted RBP24.6■■□□□ 1.53
PUDP-205ENST00000498474 PHF23Q9BUL5 403 aaPredicted RBP24.38■■□□□ 1.49
PUDP-205ENST00000498474 FOXD1Q16676 465 aa23.02■■□□□ 1.28
PUDP-205ENST00000498474 PLPPR3Q6T4P5 718 aa22.05■■□□□ 1.12
PUDP-205ENST00000498474 PPP6R1Q9UPN7 881 aa21.67■■□□□ 1.06
PUDP-205ENST00000498474 ADRA2BP18089 450 aa21.59■■□□□ 1.05
PUDP-205ENST00000498474 PIAS4Q8N2W9 510 aaPredicted RBP21.5■■□□□ 1.03
PUDP-205ENST00000498474 MSH5O43196 834 aa21.38■■□□□ 1.01
PUDP-205ENST00000498474 POTEDQ86YR6 584 aa20.77■□□□□ 0.92
PUDP-205ENST00000498474 MAPK8IP2Q13387 824 aaPredicted RBP19.83■□□□□ 0.77
PUDP-205ENST00000498474 NISCHQ9Y2I1 1504 aa19.69■□□□□ 0.74
PUDP-205ENST00000498474 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
PUDP-205ENST00000498474 DMRT2Q9Y5R5 561 aa19.56■□□□□ 0.72
PUDP-205ENST00000498474 PPP4R3CPQ6ZMV5 832 aa19.41■□□□□ 0.7
PUDP-205ENST00000498474 CNKSR2Q8WXI2 1034 aa18.96■□□□□ 0.63
PUDP-205ENST00000498474 HOXD11P31277 338 aaPredicted RBP18.88■□□□□ 0.61
PUDP-205ENST00000498474 DCAF8L1A6NGE4 600 aa18.8■□□□□ 0.6
PUDP-205ENST00000498474 RNF216Q9NWF9 866 aaPredicted RBP18.76■□□□□ 0.59
PUDP-205ENST00000498474 NCBP3Q53F19 620 aaKnown RBP18.6■□□□□ 0.57
PUDP-205ENST00000498474 NPM3O75607 178 aaKnown RBP18.44■□□□□ 0.54
PUDP-205ENST00000498474 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
PUDP-205ENST00000498474 RNF39Q9H2S5 420 aa18.31■□□□□ 0.52
PUDP-205ENST00000498474 KCNA4P22459 653 aa18.23■□□□□ 0.51
PUDP-205ENST00000498474 DNAJC5BQ9UF47 199 aa18.11■□□□□ 0.49
PUDP-205ENST00000498474 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.01■□□□□ 0.47
PUDP-205ENST00000498474 C1QBPQ07021 282 aaKnown RBP18■□□□□ 0.47
PUDP-205ENST00000498474 U3KPZ7 1027 aaPredicted RBP17.67■□□□□ 0.42
PUDP-205ENST00000498474 SLC4A2P04920 1241 aa17.61■□□□□ 0.41
PUDP-205ENST00000498474 ABCC9O60706 1549 aa17.59■□□□□ 0.41
PUDP-205ENST00000498474 CCDC180Q9P1Z9 1646 aa17.57■□□□□ 0.4
PUDP-205ENST00000498474 SPINK5Q9NQ38 1064 aaPredicted RBP17.43■□□□□ 0.38
PUDP-205ENST00000498474 CAPN15O75808 1086 aa17.33■□□□□ 0.36
PUDP-205ENST00000498474 DSG3P32926 999 aa17.21■□□□□ 0.35
PUDP-205ENST00000498474 SLC4A1APQ9BWU0 796 aaKnown RBP17.18■□□□□ 0.34
PUDP-205ENST00000498474 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
PUDP-205ENST00000498474 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.07■□□□□ 0.32
PUDP-205ENST00000498474 HNRNPUL2Q1KMD3 747 aaKnown RBP17.07■□□□□ 0.32
PUDP-205ENST00000498474 APLP2Q06481 763 aa17.02■□□□□ 0.32
PUDP-205ENST00000498474 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.32
PUDP-205ENST00000498474 ABCB7O75027 752 aa17■□□□□ 0.31
PUDP-205ENST00000498474 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
PUDP-205ENST00000498474 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
PUDP-205ENST00000498474 FOXD4L1Q9NU39 408 aa16.89■□□□□ 0.29
PUDP-205ENST00000498474 ZBTB22O15209 634 aa16.8■□□□□ 0.28
PUDP-205ENST00000498474 ATF5Q9Y2D1 282 aaPredicted RBP16.73■□□□□ 0.27
PUDP-205ENST00000498474 DCAF8L2P0C7V8 631 aa16.7■□□□□ 0.26
PUDP-205ENST00000498474 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
PUDP-205ENST00000498474 POLA2Q14181 598 aa16.67■□□□□ 0.26
PUDP-205ENST00000498474 NACADO15069 1562 aa16.59■□□□□ 0.25
PUDP-205ENST00000498474 PABPN1Q86U42 306 aaKnown RBP eCLIP16.44■□□□□ 0.22
PUDP-205ENST00000498474 UNC13AQ9UPW8 1703 aa16.43■□□□□ 0.22
PUDP-205ENST00000498474 ZCCHC6Q5VYS8 1495 aaKnown RBP16.33■□□□□ 0.2
PUDP-205ENST00000498474 MYO15BQ96JP2 1530 aa16.32■□□□□ 0.2
PUDP-205ENST00000498474 ATXN8OSP0DMR3 200 aa16.31■□□□□ 0.2
PUDP-205ENST00000498474 RBM42Q9BTD8 480 aaKnown RBP16.31■□□□□ 0.2
PUDP-205ENST00000498474 POTEHQ6S545 545 aa16.27■□□□□ 0.2
PUDP-205ENST00000498474 BICRAQ9NZM4 1560 aa16.26■□□□□ 0.19
PUDP-205ENST00000498474 ZBTB12Q9Y330 459 aaPredicted RBP16.21■□□□□ 0.19
PUDP-205ENST00000498474 DCAF1Q9Y4B6 1507 aa16.18■□□□□ 0.18
PUDP-205ENST00000498474 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
PUDP-205ENST00000498474 SCRIBQ14160 1630 aa16.13■□□□□ 0.17
PUDP-205ENST00000498474 CSRNP3Q8WYN3 585 aa16.1■□□□□ 0.17
PUDP-205ENST00000498474 AKT1S1Q96B36 256 aa16■□□□□ 0.15
PUDP-205ENST00000498474 CHRDL2Q6WN34 429 aa15.99■□□□□ 0.15
PUDP-205ENST00000498474 EHMT2Q96KQ7 1210 aa15.98■□□□□ 0.15
PUDP-205ENST00000498474 MKRN4PQ13434 485 aaPredicted RBP15.93■□□□□ 0.14
PUDP-205ENST00000498474 FBLN2P98095 1184 aa15.91■□□□□ 0.14
PUDP-205ENST00000498474 REM2Q8IYK8 340 aaPredicted RBP15.91■□□□□ 0.14
PUDP-205ENST00000498474 SHROOM4Q9ULL8 1493 aa15.87■□□□□ 0.13
PUDP-205ENST00000498474 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
PUDP-205ENST00000498474 EIF4G1Q04637 1599 aaKnown RBP15.83■□□□□ 0.12
PUDP-205ENST00000498474 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
PUDP-205ENST00000498474 SPDYE2BA6NHP3 402 aa15.77■□□□□ 0.12
PUDP-205ENST00000498474 SPDYE6P0CI01 402 aa15.77■□□□□ 0.12
PUDP-205ENST00000498474 SPDYE2Q495Y8 402 aa15.77■□□□□ 0.12
PUDP-205ENST00000498474 PITPNM1O00562 1244 aa15.75■□□□□ 0.11
PUDP-205ENST00000498474 PIP4P2Q8N4L2 257 aa15.66■□□□□ 0.1
PUDP-205ENST00000498474 ZNF692Q9BU19 519 aaPredicted RBP15.65■□□□□ 0.1
PUDP-205ENST00000498474 SSUH2Q9Y2M2 353 aa15.61■□□□□ 0.09
PUDP-205ENST00000498474 FXR2P51116 673 aaKnown RBP eCLIP15.56■□□□□ 0.08
PUDP-205ENST00000498474 CLEC11AQ9Y240 323 aa15.51■□□□□ 0.07
PUDP-205ENST00000498474 SPDYE1Q8NFV5 336 aaPredicted RBP15.47■□□□□ 0.07
PUDP-205ENST00000498474 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
PUDP-205ENST00000498474 PRKAR2AP13861 404 aaKnown RBP15.34■□□□□ 0.05
PUDP-205ENST00000498474 HAX1O00165 279 aa15.33■□□□□ 0.04
PUDP-205ENST00000498474 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.04
PUDP-205ENST00000498474 NCAPD3P42695 1498 aa15.32■□□□□ 0.04
PUDP-205ENST00000498474 SP7Q8TDD2 431 aaPredicted RBP15.3■□□□□ 0.04
PUDP-205ENST00000498474 EVX2Q03828 476 aa15.25■□□□□ 0.03
PUDP-205ENST00000498474 CHADLQ6NUI6 762 aa15.25■□□□□ 0.03
PUDP-205ENST00000498474 SMARCA2P51531 1590 aa15.24■□□□□ 0.03
PUDP-205ENST00000498474 BAZ1AQ9NRL2 1556 aaPredicted RBP15.24■□□□□ 0.03
PUDP-205ENST00000498474 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
PUDP-205ENST00000498474 MROH2BQ7Z745 1585 aa15.22■□□□□ 0.03
PUDP-205ENST00000498474 HMGXB3Q12766 1538 aa15.2■□□□□ 0.02
PUDP-205ENST00000498474 SPDYE4A6NLX3 237 aa15.18■□□□□ 0.02
PUDP-205ENST00000498474 BAZ1BQ9UIG0 1483 aaKnown RBP15.18■□□□□ 0.02
PUDP-205ENST00000498474 NESP48681 1621 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms