RNA–Protein interactions for RNA: ENST00000498300.5

CCSER2-209, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 3

Gene CCSER2, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-209ENST00000498300 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
CCSER2-209ENST00000498300 PRKAR2AP13861 404 aaKnown RBP14.1□□□□□ -0.15
CCSER2-209ENST00000498300 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
CCSER2-209ENST00000498300 PRDM2Q13029 1718 aa14.08□□□□□ -0.16
CCSER2-209ENST00000498300 ZNF608Q9ULD9 1512 aaPredicted RBP14.08□□□□□ -0.16
CCSER2-209ENST00000498300 SPDYE2BA6NHP3 402 aa14.07□□□□□ -0.16
CCSER2-209ENST00000498300 SPDYE6P0CI01 402 aa14.07□□□□□ -0.16
CCSER2-209ENST00000498300 SPDYE2Q495Y8 402 aa14.07□□□□□ -0.16
CCSER2-209ENST00000498300 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
CCSER2-209ENST00000498300 RIMBP3CA6NJZ7 1639 aa14.05□□□□□ -0.16
CCSER2-209ENST00000498300 RIMBP3BA6NNM3 1639 aa14.05□□□□□ -0.16
CCSER2-209ENST00000498300 RIMBP3Q9UFD9 1639 aa14.05□□□□□ -0.16
CCSER2-209ENST00000498300 C19orf67A6NJJ6 358 aa14.05□□□□□ -0.16
CCSER2-209ENST00000498300 IFT140Q96RY7 1462 aa14.05□□□□□ -0.16
CCSER2-209ENST00000498300 TOPBP1Q92547 1522 aa14.02□□□□□ -0.16
CCSER2-209ENST00000498300 LHX8Q68G74 356 aa14.02□□□□□ -0.17
CCSER2-209ENST00000498300 CLEC11AQ9Y240 323 aa14.01□□□□□ -0.17
CCSER2-209ENST00000498300 GABBR2O75899 941 aa14□□□□□ -0.17
CCSER2-209ENST00000498300 ARHGEF11O15085 1522 aa13.99□□□□□ -0.17
CCSER2-209ENST00000498300 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
CCSER2-209ENST00000498300 EIF4G3O43432 1585 aaKnown RBP13.96□□□□□ -0.17
CCSER2-209ENST00000498300 ABCC8Q09428 1581 aa13.95□□□□□ -0.18
CCSER2-209ENST00000498300 DNMBPQ6XZF7 1577 aa13.94□□□□□ -0.18
CCSER2-209ENST00000498300 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.18
CCSER2-209ENST00000498300 FBLN2P98095 1184 aa13.92□□□□□ -0.18
CCSER2-209ENST00000498300 TARBP1Q13395 1621 aaKnown RBP13.91□□□□□ -0.18
CCSER2-209ENST00000498300 CYB5RLQ6IPT4 315 aa13.91□□□□□ -0.18
CCSER2-209ENST00000498300 CHD1O14646 1710 aa13.9□□□□□ -0.18
CCSER2-209ENST00000498300 ZBTB22O15209 634 aa13.88□□□□□ -0.19
CCSER2-209ENST00000498300 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
CCSER2-209ENST00000498300 ATXN8OSP0DMR3 200 aa13.85□□□□□ -0.19
CCSER2-209ENST00000498300 ARAP1Q96P48 1450 aa13.85□□□□□ -0.19
CCSER2-209ENST00000498300 RAD54L2Q9Y4B4 1467 aa13.83□□□□□ -0.2
CCSER2-209ENST00000498300 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
CCSER2-209ENST00000498300 SSUH2Q9Y2M2 353 aa13.82□□□□□ -0.2
CCSER2-209ENST00000498300 TDRD9Q8NDG6 1382 aaKnown RBP13.82□□□□□ -0.2
CCSER2-209ENST00000498300 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
CCSER2-209ENST00000498300 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
CCSER2-209ENST00000498300 SOGA1O94964 1423 aa13.8□□□□□ -0.2
CCSER2-209ENST00000498300 SNAPC4Q5SXM2 1469 aa13.76□□□□□ -0.21
CCSER2-209ENST00000498300 FGD5Q6ZNL6 1462 aa13.75□□□□□ -0.21
CCSER2-209ENST00000498300 CLASP1Q7Z460 1538 aa13.74□□□□□ -0.21
CCSER2-209ENST00000498300 CUX1P39880 1505 aa13.73□□□□□ -0.21
CCSER2-209ENST00000498300 POTEIP0CG38 1075 aa13.72□□□□□ -0.21
CCSER2-209ENST00000498300 CHMP7Q8WUX9 453 aaPredicted RBP13.72□□□□□ -0.21
CCSER2-209ENST00000498300 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
CCSER2-209ENST00000498300 MAGI1Q96QZ7 1491 aaPredicted RBP13.7□□□□□ -0.22
CCSER2-209ENST00000498300 GRIN2BQ13224 1484 aa13.69□□□□□ -0.22
CCSER2-209ENST00000498300 SYNJ1O43426 1573 aa13.69□□□□□ -0.22
CCSER2-209ENST00000498300 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
CCSER2-209ENST00000498300 SYNJ2O15056 1496 aa13.67□□□□□ -0.22
CCSER2-209ENST00000498300 PLSCR2Q9NRY7 297 aa13.66□□□□□ -0.22
CCSER2-209ENST00000498300 GAPVD1Q14C86 1478 aa13.62□□□□□ -0.23
CCSER2-209ENST00000498300 PBRM1Q86U86 1689 aa13.62□□□□□ -0.23
CCSER2-209ENST00000498300 CD44P16070 742 aaKnown RBP13.61□□□□□ -0.23
CCSER2-209ENST00000498300 ABCA10Q8WWZ4 1543 aa13.58□□□□□ -0.24
CCSER2-209ENST00000498300 ABCA5Q8WWZ7 1642 aa13.57□□□□□ -0.24
CCSER2-209ENST00000498300 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
CCSER2-209ENST00000498300 ERCC6L2Q5T890 1561 aa13.53□□□□□ -0.24
CCSER2-209ENST00000498300 GRIN2AQ12879 1464 aa13.52□□□□□ -0.25
CCSER2-209ENST00000498300 WRNQ14191 1432 aaPredicted RBP eCLIP13.49□□□□□ -0.25
CCSER2-209ENST00000498300 CLCN6P51797 869 aa13.49□□□□□ -0.25
CCSER2-209ENST00000498300 ADAMTS12P58397 1594 aa13.49□□□□□ -0.25
CCSER2-209ENST00000498300 CEP170Q5SW79 1584 aa13.49□□□□□ -0.25
CCSER2-209ENST00000498300 NUP160Q12769 1436 aa13.48□□□□□ -0.25
CCSER2-209ENST00000498300 SUPT5HO00267 1087 aaKnown RBP13.47□□□□□ -0.25
CCSER2-209ENST00000498300 DCBLD2Q96PD2 775 aa13.47□□□□□ -0.25
CCSER2-209ENST00000498300 TOP2BQ02880 1626 aa13.44□□□□□ -0.26
CCSER2-209ENST00000498300 SHROOM2Q13796 1616 aa13.44□□□□□ -0.26
CCSER2-209ENST00000498300 FHAD1B1AJZ9 1412 aa13.44□□□□□ -0.26
CCSER2-209ENST00000498300 BIVM-ERCC5R4GMW8 1640 aa13.43□□□□□ -0.26
CCSER2-209ENST00000498300 ERICH3Q5RHP9 1530 aa13.4□□□□□ -0.26
CCSER2-209ENST00000498300 ZNF579Q8NAF0 562 aaKnown RBP13.37□□□□□ -0.27
CCSER2-209ENST00000498300 PRG4Q92954 1404 aaPredicted RBP13.37□□□□□ -0.27
CCSER2-209ENST00000498300 KIF13AQ9H1H9 1805 aa13.36□□□□□ -0.27
CCSER2-209ENST00000498300 JPH4Q96JJ6 628 aa13.35□□□□□ -0.27
CCSER2-209ENST00000498300 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
CCSER2-209ENST00000498300 ZRANB1Q9UGI0 708 aa13.32□□□□□ -0.28
CCSER2-209ENST00000498300 RUSC2Q8N2Y8 1516 aa13.3□□□□□ -0.28
CCSER2-209ENST00000498300 POTEB2H3BUK9 544 aa13.27□□□□□ -0.29
CCSER2-209ENST00000498300 GALR2O43603 387 aaPredicted RBP13.27□□□□□ -0.29
CCSER2-209ENST00000498300 FAM69CQ0P6D2 419 aa13.27□□□□□ -0.29
CCSER2-209ENST00000498300 ABCC10Q5T3U5 1492 aa13.27□□□□□ -0.29
CCSER2-209ENST00000498300 ADCY10Q96PN6 1610 aa13.25□□□□□ -0.29
CCSER2-209ENST00000498300 MAPKBP1O60336 1514 aa13.25□□□□□ -0.29
CCSER2-209ENST00000498300 NPM1P06748 294 aaKnown RBP eCLIP13.25□□□□□ -0.29
CCSER2-209ENST00000498300 POTEMA6NI47 508 aa13.23□□□□□ -0.29
CCSER2-209ENST00000498300 DIP2BQ9P265 1576 aa13.23□□□□□ -0.29
CCSER2-209ENST00000498300 KIAA0586Q9BVV6 1533 aa13.22□□□□□ -0.29
CCSER2-209ENST00000498300 IGF1RP08069 1367 aa13.21□□□□□ -0.29
CCSER2-209ENST00000498300 CREBZFQ9NS37 354 aa13.2□□□□□ -0.3
CCSER2-209ENST00000498300 POTEGQ6S5H5 508 aa13.18□□□□□ -0.3
CCSER2-209ENST00000498300 KIF27Q86VH2 1401 aa13.16□□□□□ -0.3
CCSER2-209ENST00000498300 CUL7Q14999 1698 aa13.16□□□□□ -0.3
CCSER2-209ENST00000498300 KDM6BO15054 1643 aa13.16□□□□□ -0.3
CCSER2-209ENST00000498300 KDM4FA0A1W2PPD8 638 aa13.15□□□□□ -0.3
CCSER2-209ENST00000498300 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
CCSER2-209ENST00000498300 PTPRGP23470 1445 aa13.13□□□□□ -0.31
CCSER2-209ENST00000498300 TTBK1Q5TCY1 1321 aaPredicted RBP13.12□□□□□ -0.31
CCSER2-209ENST00000498300 PHF12Q96QT6 1004 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms