RNA–Protein interactions for RNA: ENST00000498300.5

CCSER2-209, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 3

Gene CCSER2, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-209ENST00000498300 AEBP2Q6ZN18 517 aaPredicted RBP26.8■■□□□ 1.88
CCSER2-209ENST00000498300 CHIC1Q5VXU3 224 aa24.97■■□□□ 1.59
CCSER2-209ENST00000498300 SENP3Q9H4L4 574 aaPredicted RBP22.91■■□□□ 1.26
CCSER2-209ENST00000498300 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
CCSER2-209ENST00000498300 FOXD1Q16676 465 aa21.47■■□□□ 1.03
CCSER2-209ENST00000498300 POTEDQ86YR6 584 aa20.94■□□□□ 0.94
CCSER2-209ENST00000498300 MSH5O43196 834 aa20.29■□□□□ 0.84
CCSER2-209ENST00000498300 PIAS4Q8N2W9 510 aaPredicted RBP19.89■□□□□ 0.77
CCSER2-209ENST00000498300 PPP6R1Q9UPN7 881 aa19.61■□□□□ 0.73
CCSER2-209ENST00000498300 ADRA2BP18089 450 aa19.5■□□□□ 0.71
CCSER2-209ENST00000498300 PLPPR3Q6T4P5 718 aa19.49■□□□□ 0.71
CCSER2-209ENST00000498300 NISCHQ9Y2I1 1504 aa18.93■□□□□ 0.62
CCSER2-209ENST00000498300 MAPK8IP2Q13387 824 aaPredicted RBP18.12■□□□□ 0.49
CCSER2-209ENST00000498300 DMRT2Q9Y5R5 561 aa18.08■□□□□ 0.48
CCSER2-209ENST00000498300 CACNB1Q02641 598 aaPredicted RBP17.83■□□□□ 0.44
CCSER2-209ENST00000498300 SCAF1Q9H7N4 1312 aaKnown RBP17.76■□□□□ 0.43
CCSER2-209ENST00000498300 DCAF8L1A6NGE4 600 aa17.39■□□□□ 0.37
CCSER2-209ENST00000498300 RNF39Q9H2S5 420 aa17.28■□□□□ 0.36
CCSER2-209ENST00000498300 ABCC9O60706 1549 aa17.25■□□□□ 0.35
CCSER2-209ENST00000498300 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
CCSER2-209ENST00000498300 CCDC180Q9P1Z9 1646 aa17.04■□□□□ 0.32
CCSER2-209ENST00000498300 PPP4R3CPQ6ZMV5 832 aa17.03■□□□□ 0.32
CCSER2-209ENST00000498300 C1QBPQ07021 282 aaKnown RBP16.97■□□□□ 0.31
CCSER2-209ENST00000498300 CNKSR2Q8WXI2 1034 aa16.84■□□□□ 0.29
CCSER2-209ENST00000498300 RNF216Q9NWF9 866 aaPredicted RBP16.84■□□□□ 0.29
CCSER2-209ENST00000498300 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
CCSER2-209ENST00000498300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCSER2-209ENST00000498300 RB1CC1Q8TDY2 1594 aa16.31■□□□□ 0.2
CCSER2-209ENST00000498300 POTEHQ6S545 545 aa16.28■□□□□ 0.2
CCSER2-209ENST00000498300 NACADO15069 1562 aa16.16■□□□□ 0.18
CCSER2-209ENST00000498300 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
CCSER2-209ENST00000498300 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
CCSER2-209ENST00000498300 PABPN1Q86U42 306 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCSER2-209ENST00000498300 DSG3P32926 999 aa15.98■□□□□ 0.15
CCSER2-209ENST00000498300 UNC13AQ9UPW8 1703 aa15.96■□□□□ 0.15
CCSER2-209ENST00000498300 NPM3O75607 178 aaKnown RBP15.95■□□□□ 0.14
CCSER2-209ENST00000498300 U3KPZ7 1027 aaPredicted RBP15.95■□□□□ 0.14
CCSER2-209ENST00000498300 SPINK5Q9NQ38 1064 aaPredicted RBP15.93■□□□□ 0.14
CCSER2-209ENST00000498300 CAPN15O75808 1086 aa15.91■□□□□ 0.14
CCSER2-209ENST00000498300 MYO15BQ96JP2 1530 aa15.88■□□□□ 0.13
CCSER2-209ENST00000498300 BICRAQ9NZM4 1560 aa15.87■□□□□ 0.13
CCSER2-209ENST00000498300 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
CCSER2-209ENST00000498300 DCAF1Q9Y4B6 1507 aa15.61■□□□□ 0.09
CCSER2-209ENST00000498300 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
CCSER2-209ENST00000498300 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
CCSER2-209ENST00000498300 CECR2Q9BXF3 1484 aa15.54■□□□□ 0.08
CCSER2-209ENST00000498300 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
CCSER2-209ENST00000498300 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
CCSER2-209ENST00000498300 ABCB7O75027 752 aa15.5■□□□□ 0.07
CCSER2-209ENST00000498300 EIF4G1Q04637 1599 aaKnown RBP15.49■□□□□ 0.07
CCSER2-209ENST00000498300 SLC4A2P04920 1241 aa15.42■□□□□ 0.06
CCSER2-209ENST00000498300 ZNF219Q9P2Y4 722 aaPredicted RBP15.41■□□□□ 0.06
CCSER2-209ENST00000498300 APLP2Q06481 763 aa15.36■□□□□ 0.05
CCSER2-209ENST00000498300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.21■□□□□ 0.03
CCSER2-209ENST00000498300 HNRNPUL2Q1KMD3 747 aaKnown RBP15.21■□□□□ 0.03
CCSER2-209ENST00000498300 RBM42Q9BTD8 480 aaKnown RBP15.21■□□□□ 0.03
CCSER2-209ENST00000498300 CHRDL2Q6WN34 429 aa15.17■□□□□ 0.02
CCSER2-209ENST00000498300 DNAJC5Q9H3Z4 198 aa15.14■□□□□ 0.01
CCSER2-209ENST00000498300 SAMD1Q6SPF0 538 aaPredicted RBP15.12■□□□□ 0.01
CCSER2-209ENST00000498300 KCNA4P22459 653 aa15.09■□□□□ 0.01
CCSER2-209ENST00000498300 SP7Q8TDD2 431 aaPredicted RBP14.95□□□□□ -0.02
CCSER2-209ENST00000498300 NCAPD3P42695 1498 aa14.94□□□□□ -0.02
CCSER2-209ENST00000498300 POLA2Q14181 598 aa14.93□□□□□ -0.02
CCSER2-209ENST00000498300 CUX2O14529 1486 aa14.91□□□□□ -0.02
CCSER2-209ENST00000498300 ERCC6Q03468 1493 aa14.88□□□□□ -0.03
CCSER2-209ENST00000498300 ATAD2BQ9ULI0 1458 aa14.87□□□□□ -0.03
CCSER2-209ENST00000498300 SMARCA4P51532 1647 aa14.8□□□□□ -0.04
CCSER2-209ENST00000498300 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
CCSER2-209ENST00000498300 HMGXB3Q12766 1538 aa14.79□□□□□ -0.04
CCSER2-209ENST00000498300 NESP48681 1621 aa14.78□□□□□ -0.04
CCSER2-209ENST00000498300 MYCNP04198 464 aaPredicted RBP14.75□□□□□ -0.05
CCSER2-209ENST00000498300 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
CCSER2-209ENST00000498300 BAZ1BQ9UIG0 1483 aaKnown RBP14.7□□□□□ -0.06
CCSER2-209ENST00000498300 BAZ1AQ9NRL2 1556 aaPredicted RBP14.69□□□□□ -0.06
CCSER2-209ENST00000498300 PIP4P2Q8N4L2 257 aa14.68□□□□□ -0.06
CCSER2-209ENST00000498300 PEG3Q9GZU2 1588 aa14.65□□□□□ -0.06
CCSER2-209ENST00000498300 THOC2Q8NI27 1593 aaKnown RBP14.64□□□□□ -0.07
CCSER2-209ENST00000498300 REM2Q8IYK8 340 aaPredicted RBP14.63□□□□□ -0.07
CCSER2-209ENST00000498300 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
CCSER2-209ENST00000498300 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
CCSER2-209ENST00000498300 HAX1O00165 279 aa14.58□□□□□ -0.08
CCSER2-209ENST00000498300 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
CCSER2-209ENST00000498300 PDS5BQ9NTI5 1447 aa14.53□□□□□ -0.08
CCSER2-209ENST00000498300 ZBTB12Q9Y330 459 aaPredicted RBP14.53□□□□□ -0.08
CCSER2-209ENST00000498300 ATF5Q9Y2D1 282 aaPredicted RBP14.51□□□□□ -0.09
CCSER2-209ENST00000498300 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
CCSER2-209ENST00000498300 PITPNM1O00562 1244 aa14.49□□□□□ -0.09
CCSER2-209ENST00000498300 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.09
CCSER2-209ENST00000498300 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
CCSER2-209ENST00000498300 MRC2Q9UBG0 1479 aa14.43□□□□□ -0.1
CCSER2-209ENST00000498300 WIZO95785 1651 aa14.41□□□□□ -0.1
CCSER2-209ENST00000498300 TRIM41Q8WV44 630 aa14.4□□□□□ -0.1
CCSER2-209ENST00000498300 WDR62O43379 1518 aa14.4□□□□□ -0.1
CCSER2-209ENST00000498300 EVX2Q03828 476 aa14.39□□□□□ -0.11
CCSER2-209ENST00000498300 CEP164Q9UPV0 1460 aa14.33□□□□□ -0.12
CCSER2-209ENST00000498300 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
CCSER2-209ENST00000498300 CFTRP13569 1480 aa14.27□□□□□ -0.12
CCSER2-209ENST00000498300 FOXD4L1Q9NU39 408 aa14.25□□□□□ -0.13
CCSER2-209ENST00000498300 RSF1Q96T23 1441 aaPredicted RBP14.24□□□□□ -0.13
CCSER2-209ENST00000498300 URB2Q14146 1524 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms