RNA–Protein interactions for RNA: ENST00000498013.1

LTBP1-212, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 4

Gene LTBP1, Length 722 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-212ENST00000498013 FANCD2Q9BXW9 1451 aa8.61□□□□□ -1.03
LTBP1-212ENST00000498013 TRIM26Q12899 539 aaPredicted RBP8.6□□□□□ -1.03
LTBP1-212ENST00000498013 TSHZ2Q9NRE2 1034 aa8.59□□□□□ -1.03
LTBP1-212ENST00000498013 PRDM2Q13029 1718 aa8.57□□□□□ -1.04
LTBP1-212ENST00000498013 MROH2BQ7Z745 1585 aa8.57□□□□□ -1.04
LTBP1-212ENST00000498013 NPM1P06748 294 aaKnown RBP eCLIP8.57□□□□□ -1.04
LTBP1-212ENST00000498013 CYB5RLQ6IPT4 315 aa8.57□□□□□ -1.04
LTBP1-212ENST00000498013 MYCNP04198 464 aaPredicted RBP8.56□□□□□ -1.04
LTBP1-212ENST00000498013 CFAP44Q96MT7 982 aa8.56□□□□□ -1.04
LTBP1-212ENST00000498013 CHD1O14646 1710 aa8.56□□□□□ -1.04
LTBP1-212ENST00000498013 SUPT5HO00267 1087 aaKnown RBP8.54□□□□□ -1.04
LTBP1-212ENST00000498013 SLC4A2P04920 1241 aa8.54□□□□□ -1.04
LTBP1-212ENST00000498013 HRCP23327 699 aa8.53□□□□□ -1.04
LTBP1-212ENST00000498013 URB2Q14146 1524 aaKnown RBP8.53□□□□□ -1.04
LTBP1-212ENST00000498013 ARAP1Q96P48 1450 aa8.52□□□□□ -1.05
LTBP1-212ENST00000498013 UBTFP17480 764 aaKnown RBP8.52□□□□□ -1.05
LTBP1-212ENST00000498013 VASPP50552 380 aaPredicted RBP8.52□□□□□ -1.05
LTBP1-212ENST00000498013 WIZO95785 1651 aa8.52□□□□□ -1.05
LTBP1-212ENST00000498013 EIF4G3O43432 1585 aaKnown RBP8.52□□□□□ -1.05
LTBP1-212ENST00000498013 IFNLR1Q8IU57 520 aaPredicted RBP8.51□□□□□ -1.05
LTBP1-212ENST00000498013 SPRYD3Q8NCJ5 442 aa8.51□□□□□ -1.05
LTBP1-212ENST00000498013 IFT140Q96RY7 1462 aa8.51□□□□□ -1.05
LTBP1-212ENST00000498013 RSF1Q96T23 1441 aaPredicted RBP8.48□□□□□ -1.05
LTBP1-212ENST00000498013 CFTRP13569 1480 aa8.48□□□□□ -1.05
LTBP1-212ENST00000498013 ZNF608Q9ULD9 1512 aaPredicted RBP8.48□□□□□ -1.05
LTBP1-212ENST00000498013 SCAF1Q9H7N4 1312 aaKnown RBP8.48□□□□□ -1.05
LTBP1-212ENST00000498013 PIAS4Q8N2W9 510 aaPredicted RBP8.46□□□□□ -1.06
LTBP1-212ENST00000498013 PROM2Q8N271 834 aa8.45□□□□□ -1.06
LTBP1-212ENST00000498013 RNF216Q9NWF9 866 aaPredicted RBP8.45□□□□□ -1.06
LTBP1-212ENST00000498013 SYNJ1O43426 1573 aa8.4□□□□□ -1.06
LTBP1-212ENST00000498013 TOPBP1Q92547 1522 aa8.4□□□□□ -1.06
LTBP1-212ENST00000498013 ABCC8Q09428 1581 aa8.39□□□□□ -1.07
LTBP1-212ENST00000498013 TOP2AP11388 1531 aaKnown RBP8.39□□□□□ -1.07
LTBP1-212ENST00000498013 DNMBPQ6XZF7 1577 aa8.38□□□□□ -1.07
LTBP1-212ENST00000498013 CLASP1Q7Z460 1538 aa8.36□□□□□ -1.07
LTBP1-212ENST00000498013 AQRO60306 1485 aaKnown RBP eCLIP8.35□□□□□ -1.07
LTBP1-212ENST00000498013 TARBP1Q13395 1621 aaKnown RBP8.35□□□□□ -1.07
LTBP1-212ENST00000498013 BRPF1P55201 1214 aaPredicted RBP8.34□□□□□ -1.07
LTBP1-212ENST00000498013 WDR97A6NE52 1622 aa8.32□□□□□ -1.08
LTBP1-212ENST00000498013 SNAPC4Q5SXM2 1469 aa8.32□□□□□ -1.08
LTBP1-212ENST00000498013 ECM2O94769 699 aaPredicted RBP8.31□□□□□ -1.08
LTBP1-212ENST00000498013 ILDR1Q86SU0 546 aaPredicted RBP8.31□□□□□ -1.08
LTBP1-212ENST00000498013 GAPVD1Q14C86 1478 aa8.31□□□□□ -1.08
LTBP1-212ENST00000498013 EIF5BO60841 1220 aaKnown RBP8.3□□□□□ -1.08
LTBP1-212ENST00000498013 CCDC9Q9Y3X0 531 aaKnown RBP8.3□□□□□ -1.08
LTBP1-212ENST00000498013 CHMP7Q8WUX9 453 aaPredicted RBP8.29□□□□□ -1.08
LTBP1-212ENST00000498013 MAGI1Q96QZ7 1491 aaPredicted RBP8.29□□□□□ -1.08
LTBP1-212ENST00000498013 KIF13AQ9H1H9 1805 aa8.29□□□□□ -1.08
LTBP1-212ENST00000498013 PBRM1Q86U86 1689 aa8.28□□□□□ -1.08
LTBP1-212ENST00000498013 LOC105371045A0A1W2PR82 267 aa8.28□□□□□ -1.08
LTBP1-212ENST00000498013 POLA1P09884 1462 aaPredicted RBP8.27□□□□□ -1.09
LTBP1-212ENST00000498013 RGL2O15211 777 aa8.25□□□□□ -1.09
LTBP1-212ENST00000498013 ATF5Q9Y2D1 282 aaPredicted RBP8.25□□□□□ -1.09
LTBP1-212ENST00000498013 SYNJ2O15056 1496 aa8.25□□□□□ -1.09
LTBP1-212ENST00000498013 TDRD9Q8NDG6 1382 aaKnown RBP8.23□□□□□ -1.09
LTBP1-212ENST00000498013 SPDYE4A6NLX3 237 aa8.23□□□□□ -1.09
LTBP1-212ENST00000498013 GRIN2BQ13224 1484 aa8.23□□□□□ -1.09
LTBP1-212ENST00000498013 RAD54L2Q9Y4B4 1467 aa8.23□□□□□ -1.09
LTBP1-212ENST00000498013 SOGA1O94964 1423 aa8.22□□□□□ -1.09
LTBP1-212ENST00000498013 CCDC88BA6NC98 1476 aa8.22□□□□□ -1.09
LTBP1-212ENST00000498013 ZMYND15Q9H091 742 aa8.22□□□□□ -1.09
LTBP1-212ENST00000498013 KDM6BO15054 1643 aa8.21□□□□□ -1.09
LTBP1-212ENST00000498013 RSPH6AQ9H0K4 717 aa8.21□□□□□ -1.1
LTBP1-212ENST00000498013 FGD5Q6ZNL6 1462 aa8.19□□□□□ -1.1
LTBP1-212ENST00000498013 SPOCK2Q92563 424 aa8.19□□□□□ -1.1
LTBP1-212ENST00000498013 TSPOAP1O95153 1857 aa8.18□□□□□ -1.1
LTBP1-212ENST00000498013 ZBTB7CA1YPR0 619 aa8.18□□□□□ -1.1
LTBP1-212ENST00000498013 ERCC6L2Q5T890 1561 aa8.18□□□□□ -1.1
LTBP1-212ENST00000498013 HOXD11P31277 338 aaPredicted RBP8.17□□□□□ -1.1
LTBP1-212ENST00000498013 CEP170Q5SW79 1584 aa8.17□□□□□ -1.1
LTBP1-212ENST00000498013 CHGAP10645 457 aaKnown RBP8.14□□□□□ -1.11
LTBP1-212ENST00000498013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.14□□□□□ -1.11
LTBP1-212ENST00000498013 SHROOM2Q13796 1616 aa8.13□□□□□ -1.11
LTBP1-212ENST00000498013 ABCA5Q8WWZ7 1642 aa8.13□□□□□ -1.11
LTBP1-212ENST00000498013 DIP2BQ9P265 1576 aa8.13□□□□□ -1.11
LTBP1-212ENST00000498013 GRIN2AQ12879 1464 aa8.13□□□□□ -1.11
LTBP1-212ENST00000498013 KDM4FA0A1W2PPD8 638 aa8.12□□□□□ -1.11
LTBP1-212ENST00000498013 FAM69CQ0P6D2 419 aa8.12□□□□□ -1.11
LTBP1-212ENST00000498013 LMOD2Q6P5Q4 547 aa8.12□□□□□ -1.11
LTBP1-212ENST00000498013 HS6ST3Q8IZP7 471 aa8.12□□□□□ -1.11
LTBP1-212ENST00000498013 C1orf115Q9H7X2 142 aa8.12□□□□□ -1.11
LTBP1-212ENST00000498013 HECW2Q9P2P5 1572 aa8.12□□□□□ -1.11
LTBP1-212ENST00000498013 ABCC10Q5T3U5 1492 aa8.12□□□□□ -1.11
LTBP1-212ENST00000498013 ADAMTS12P58397 1594 aa8.11□□□□□ -1.11
LTBP1-212ENST00000498013 NECTIN2Q92692 538 aa8.11□□□□□ -1.11
LTBP1-212ENST00000498013 MAPKBP1O60336 1514 aa8.1□□□□□ -1.11
LTBP1-212ENST00000498013 MAPK8IP2Q13387 824 aaPredicted RBP8.1□□□□□ -1.11
LTBP1-212ENST00000498013 CUX1P39880 1505 aa8.09□□□□□ -1.11
LTBP1-212ENST00000498013 HMGB1P09429 215 aaKnown RBP8.09□□□□□ -1.11
LTBP1-212ENST00000498013 PDIA4P13667 645 aaKnown RBP8.09□□□□□ -1.11
LTBP1-212ENST00000498013 NEUROD2Q15784 382 aa8.09□□□□□ -1.11
LTBP1-212ENST00000498013 ADGRL1O94910 1474 aa8.08□□□□□ -1.12
LTBP1-212ENST00000498013 IGSF3O75054 1194 aa8.08□□□□□ -1.12
LTBP1-212ENST00000498013 NUP160Q12769 1436 aa8.07□□□□□ -1.12
LTBP1-212ENST00000498013 ABCA10Q8WWZ4 1543 aa8.07□□□□□ -1.12
LTBP1-212ENST00000498013 P3H3Q8IVL6 736 aa8.06□□□□□ -1.12
LTBP1-212ENST00000498013 PRG4Q92954 1404 aaPredicted RBP8.04□□□□□ -1.12
LTBP1-212ENST00000498013 ADCY10Q96PN6 1610 aa8.04□□□□□ -1.12
LTBP1-212ENST00000498013 FBXO41Q8TF61 875 aa8.03□□□□□ -1.12
LTBP1-212ENST00000498013 HSP90B1P14625 803 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms