RNA–Protein interactions for RNA: ENST00000498013.1

LTBP1-212, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 4

Gene LTBP1, Length 722 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-212ENST00000498013 CHIC1Q5VXU3 224 aa12.33□□□□□ -0.44
LTBP1-212ENST00000498013 AEBP2Q6ZN18 517 aaPredicted RBP11.55□□□□□ -0.56
LTBP1-212ENST00000498013 SLC24A1O60721 1099 aa11.27□□□□□ -0.61
LTBP1-212ENST00000498013 NISCHQ9Y2I1 1504 aa11.15□□□□□ -0.62
LTBP1-212ENST00000498013 PHF23Q9BUL5 403 aaPredicted RBP10.98□□□□□ -0.65
LTBP1-212ENST00000498013 EHMT2Q96KQ7 1210 aa10.88□□□□□ -0.67
LTBP1-212ENST00000498013 ABCC9O60706 1549 aa10.58□□□□□ -0.72
LTBP1-212ENST00000498013 PLPPR3Q6T4P5 718 aa10.45□□□□□ -0.74
LTBP1-212ENST00000498013 CSRNP3Q8WYN3 585 aa10.4□□□□□ -0.74
LTBP1-212ENST00000498013 AMER1Q5JTC6 1135 aaPredicted RBP10.39□□□□□ -0.75
LTBP1-212ENST00000498013 RTN4Q9NQC3 1192 aaKnown RBP10.38□□□□□ -0.75
LTBP1-212ENST00000498013 KCNA4P22459 653 aa10.34□□□□□ -0.75
LTBP1-212ENST00000498013 CCDC180Q9P1Z9 1646 aa10.3□□□□□ -0.76
LTBP1-212ENST00000498013 NCBP3Q53F19 620 aaKnown RBP10.17□□□□□ -0.78
LTBP1-212ENST00000498013 DNAJC5BQ9UF47 199 aa10.08□□□□□ -0.8
LTBP1-212ENST00000498013 SLC4A1APQ9BWU0 796 aaKnown RBP10.01□□□□□ -0.81
LTBP1-212ENST00000498013 DAXXQ9UER7 740 aaPredicted RBP10□□□□□ -0.81
LTBP1-212ENST00000498013 RB1CC1Q8TDY2 1594 aa9.97□□□□□ -0.81
LTBP1-212ENST00000498013 UNC13AQ9UPW8 1703 aa9.76□□□□□ -0.85
LTBP1-212ENST00000498013 NACADO15069 1562 aa9.76□□□□□ -0.85
LTBP1-212ENST00000498013 ADRA2BP18089 450 aa9.72□□□□□ -0.85
LTBP1-212ENST00000498013 PABPN1Q86U42 306 aaKnown RBP eCLIP9.71□□□□□ -0.86
LTBP1-212ENST00000498013 ARXQ96QS3 562 aa9.66□□□□□ -0.86
LTBP1-212ENST00000498013 PRKCSHP14314 528 aaPredicted RBP9.63□□□□□ -0.87
LTBP1-212ENST00000498013 DCAF8L2P0C7V8 631 aa9.61□□□□□ -0.87
LTBP1-212ENST00000498013 DNAJC5Q9H3Z4 198 aa9.61□□□□□ -0.87
LTBP1-212ENST00000498013 ZBTB22O15209 634 aa9.6□□□□□ -0.87
LTBP1-212ENST00000498013 SENP3Q9H4L4 574 aaPredicted RBP9.59□□□□□ -0.87
LTBP1-212ENST00000498013 TAOK2Q9UL54 1235 aa9.58□□□□□ -0.88
LTBP1-212ENST00000498013 BICRAQ9NZM4 1560 aa9.58□□□□□ -0.88
LTBP1-212ENST00000498013 BCANQ96GW7 911 aa9.57□□□□□ -0.88
LTBP1-212ENST00000498013 CECR2Q9BXF3 1484 aa9.57□□□□□ -0.88
LTBP1-212ENST00000498013 CC2D2AQ9P2K1 1620 aa9.56□□□□□ -0.88
LTBP1-212ENST00000498013 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
LTBP1-212ENST00000498013 SHROOM4Q9ULL8 1493 aa9.5□□□□□ -0.89
LTBP1-212ENST00000498013 MYO15BQ96JP2 1530 aa9.46□□□□□ -0.9
LTBP1-212ENST00000498013 TIMELESSQ9UNS1 1208 aa9.45□□□□□ -0.9
LTBP1-212ENST00000498013 EIF4G1Q04637 1599 aaKnown RBP9.43□□□□□ -0.9
LTBP1-212ENST00000498013 SCRIBQ14160 1630 aa9.34□□□□□ -0.91
LTBP1-212ENST00000498013 PPP4R3CPQ6ZMV5 832 aa9.33□□□□□ -0.92
LTBP1-212ENST00000498013 TPRNQ4KMQ1 711 aa9.32□□□□□ -0.92
LTBP1-212ENST00000498013 NPM3O75607 178 aaKnown RBP9.31□□□□□ -0.92
LTBP1-212ENST00000498013 CUX2O14529 1486 aa9.3□□□□□ -0.92
LTBP1-212ENST00000498013 ERICH6Q7L0X2 663 aa9.3□□□□□ -0.92
LTBP1-212ENST00000498013 TULP1O00294 542 aaPredicted RBP9.29□□□□□ -0.92
LTBP1-212ENST00000498013 HOMEZQ8IX15 550 aa9.29□□□□□ -0.92
LTBP1-212ENST00000498013 PPP6R1Q9UPN7 881 aa9.29□□□□□ -0.92
LTBP1-212ENST00000498013 VSIG10Q8N0Z9 540 aa9.27□□□□□ -0.93
LTBP1-212ENST00000498013 ERCC6Q03468 1493 aa9.23□□□□□ -0.93
LTBP1-212ENST00000498013 HAP1P54257 671 aaPredicted RBP9.23□□□□□ -0.93
LTBP1-212ENST00000498013 FKBP8Q14318 412 aa9.23□□□□□ -0.93
LTBP1-212ENST00000498013 FOXD4L1Q9NU39 408 aa9.22□□□□□ -0.93
LTBP1-212ENST00000498013 DCAF1Q9Y4B6 1507 aa9.2□□□□□ -0.94
LTBP1-212ENST00000498013 ZCCHC6Q5VYS8 1495 aaKnown RBP9.18□□□□□ -0.94
LTBP1-212ENST00000498013 GTF3C3Q9Y5Q9 886 aa9.17□□□□□ -0.94
LTBP1-212ENST00000498013 TRIM41Q8WV44 630 aa9.13□□□□□ -0.95
LTBP1-212ENST00000498013 RANGAP1P46060 587 aaPredicted RBP9.09□□□□□ -0.95
LTBP1-212ENST00000498013 APLP2Q06481 763 aa9.03□□□□□ -0.96
LTBP1-212ENST00000498013 TMEM132AQ24JP5 1023 aa9.01□□□□□ -0.97
LTBP1-212ENST00000498013 KDM2AQ9Y2K7 1162 aa9.01□□□□□ -0.97
LTBP1-212ENST00000498013 THOC2Q8NI27 1593 aaKnown RBP8.99□□□□□ -0.97
LTBP1-212ENST00000498013 SMARCA2P51531 1590 aa8.96□□□□□ -0.97
LTBP1-212ENST00000498013 NCAPD3P42695 1498 aa8.94□□□□□ -0.98
LTBP1-212ENST00000498013 NESP48681 1621 aa8.94□□□□□ -0.98
LTBP1-212ENST00000498013 KIF21AQ7Z4S6 1674 aa8.92□□□□□ -0.98
LTBP1-212ENST00000498013 HMGXB3Q12766 1538 aa8.92□□□□□ -0.98
LTBP1-212ENST00000498013 TTBK1Q5TCY1 1321 aaPredicted RBP8.92□□□□□ -0.98
LTBP1-212ENST00000498013 PODXL2Q9NZ53 605 aa8.91□□□□□ -0.98
LTBP1-212ENST00000498013 LAMC3Q9Y6N6 1575 aa8.9□□□□□ -0.98
LTBP1-212ENST00000498013 BAZ1AQ9NRL2 1556 aaPredicted RBP8.89□□□□□ -0.99
LTBP1-212ENST00000498013 ATXN8OSP0DMR3 200 aa8.88□□□□□ -0.99
LTBP1-212ENST00000498013 ATAD2BQ9ULI0 1458 aa8.88□□□□□ -0.99
LTBP1-212ENST00000498013 FBLN2P98095 1184 aa8.87□□□□□ -0.99
LTBP1-212ENST00000498013 PELP1Q8IZL8 1130 aaKnown RBP8.85□□□□□ -0.99
LTBP1-212ENST00000498013 CNKSR2Q8WXI2 1034 aa8.85□□□□□ -0.99
LTBP1-212ENST00000498013 BAZ1BQ9UIG0 1483 aaKnown RBP8.84□□□□□ -0.99
LTBP1-212ENST00000498013 SMARCA4P51532 1647 aa8.84□□□□□ -0.99
LTBP1-212ENST00000498013 C14orf37Q86TY3 774 aa8.84□□□□□ -0.99
LTBP1-212ENST00000498013 PDS5BQ9NTI5 1447 aa8.83□□□□□ -1
LTBP1-212ENST00000498013 MRC2Q9UBG0 1479 aa8.78□□□□□ -1
LTBP1-212ENST00000498013 KLHL34Q8N239 644 aa8.78□□□□□ -1
LTBP1-212ENST00000498013 WDR62O43379 1518 aa8.77□□□□□ -1.01
LTBP1-212ENST00000498013 MYT1Q01538 1121 aa8.77□□□□□ -1.01
LTBP1-212ENST00000498013 FOXD1Q16676 465 aa8.77□□□□□ -1.01
LTBP1-212ENST00000498013 FBXO3Q9UK99 471 aa8.77□□□□□ -1.01
LTBP1-212ENST00000498013 RIMBP3CA6NJZ7 1639 aa8.76□□□□□ -1.01
LTBP1-212ENST00000498013 RIMBP3BA6NNM3 1639 aa8.76□□□□□ -1.01
LTBP1-212ENST00000498013 RIMBP3Q9UFD9 1639 aa8.76□□□□□ -1.01
LTBP1-212ENST00000498013 OSCARQ8IYS5 282 aa8.75□□□□□ -1.01
LTBP1-212ENST00000498013 BBXQ8WY36 941 aaPredicted RBP8.74□□□□□ -1.01
LTBP1-212ENST00000498013 PEG3Q9GZU2 1588 aa8.72□□□□□ -1.01
LTBP1-212ENST00000498013 NPM2Q86SE8 214 aaKnown RBP8.71□□□□□ -1.02
LTBP1-212ENST00000498013 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.71□□□□□ -1.02
LTBP1-212ENST00000498013 CEP164Q9UPV0 1460 aa8.7□□□□□ -1.02
LTBP1-212ENST00000498013 TRHP20396 242 aaPredicted RBP8.68□□□□□ -1.02
LTBP1-212ENST00000498013 PKD2Q13563 968 aa8.67□□□□□ -1.02
LTBP1-212ENST00000498013 ARHGEF11O15085 1522 aa8.66□□□□□ -1.02
LTBP1-212ENST00000498013 CADPSQ9ULU8 1353 aa8.66□□□□□ -1.02
LTBP1-212ENST00000498013 NBR1Q14596 966 aa8.65□□□□□ -1.02
LTBP1-212ENST00000498013 PAXIP1Q6ZW49 1069 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms