RNA–Protein interactions for RNA: ENST00000497319.1

RBMS3-216, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 3

Gene RBMS3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-216ENST00000497319 CEP162Q5TB80 1403 aa17■□□□□ 0.31
RBMS3-216ENST00000497319 SAMD1Q6SPF0 538 aaPredicted RBP17■□□□□ 0.31
RBMS3-216ENST00000497319 CUX1P39880 1505 aa16.98■□□□□ 0.31
RBMS3-216ENST00000497319 ATF5Q9Y2D1 282 aaPredicted RBP16.98■□□□□ 0.31
RBMS3-216ENST00000497319 ARHGEF11O15085 1522 aa16.96■□□□□ 0.3
RBMS3-216ENST00000497319 FANCD2Q9BXW9 1451 aa16.94■□□□□ 0.3
RBMS3-216ENST00000497319 URB2Q14146 1524 aaKnown RBP16.93■□□□□ 0.3
RBMS3-216ENST00000497319 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.29
RBMS3-216ENST00000497319 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
RBMS3-216ENST00000497319 PRXQ9BXM0 1461 aa16.84■□□□□ 0.29
RBMS3-216ENST00000497319 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
RBMS3-216ENST00000497319 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
RBMS3-216ENST00000497319 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
RBMS3-216ENST00000497319 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
RBMS3-216ENST00000497319 FKBP8Q14318 412 aa16.79■□□□□ 0.28
RBMS3-216ENST00000497319 CLIP1P30622 1438 aa16.78■□□□□ 0.28
RBMS3-216ENST00000497319 ZEB1P37275 1124 aaPredicted RBP16.71■□□□□ 0.27
RBMS3-216ENST00000497319 FGD5Q6ZNL6 1462 aa16.71■□□□□ 0.27
RBMS3-216ENST00000497319 DNMBPQ6XZF7 1577 aa16.71■□□□□ 0.27
RBMS3-216ENST00000497319 VPS8Q8N3P4 1428 aa16.7■□□□□ 0.26
RBMS3-216ENST00000497319 APLP2Q06481 763 aa16.7■□□□□ 0.26
RBMS3-216ENST00000497319 CHD1O14646 1710 aa16.7■□□□□ 0.26
RBMS3-216ENST00000497319 EIF4G3O43432 1585 aaKnown RBP16.69■□□□□ 0.26
RBMS3-216ENST00000497319 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
RBMS3-216ENST00000497319 CYB5RLQ6IPT4 315 aa16.68■□□□□ 0.26
RBMS3-216ENST00000497319 PPARGC1BQ86YN6 1023 aaKnown RBP16.68■□□□□ 0.26
RBMS3-216ENST00000497319 IGF1RP08069 1367 aa16.64■□□□□ 0.26
RBMS3-216ENST00000497319 TOPBP1Q92547 1522 aa16.64■□□□□ 0.25
RBMS3-216ENST00000497319 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
RBMS3-216ENST00000497319 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
RBMS3-216ENST00000497319 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
RBMS3-216ENST00000497319 TARBP1Q13395 1621 aaKnown RBP16.57■□□□□ 0.24
RBMS3-216ENST00000497319 POLA1P09884 1462 aaPredicted RBP16.57■□□□□ 0.24
RBMS3-216ENST00000497319 CARMIL1Q5VZK9 1371 aa16.55■□□□□ 0.24
RBMS3-216ENST00000497319 CLASP1Q7Z460 1538 aa16.52■□□□□ 0.24
RBMS3-216ENST00000497319 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.23
RBMS3-216ENST00000497319 WDR97A6NE52 1622 aa16.52■□□□□ 0.23
RBMS3-216ENST00000497319 AQRO60306 1485 aaKnown RBP eCLIP16.5■□□□□ 0.23
RBMS3-216ENST00000497319 ARHGAP35Q9NRY4 1499 aa16.5■□□□□ 0.23
RBMS3-216ENST00000497319 CUL7Q14999 1698 aa16.49■□□□□ 0.23
RBMS3-216ENST00000497319 RNF39Q9H2S5 420 aa16.48■□□□□ 0.23
RBMS3-216ENST00000497319 TTBK1Q5TCY1 1321 aaPredicted RBP16.45■□□□□ 0.22
RBMS3-216ENST00000497319 RANGAP1P46060 587 aaPredicted RBP16.43■□□□□ 0.22
RBMS3-216ENST00000497319 ABCA5Q8WWZ7 1642 aa16.43■□□□□ 0.22
RBMS3-216ENST00000497319 SPINK5Q9NQ38 1064 aaPredicted RBP16.42■□□□□ 0.22
RBMS3-216ENST00000497319 POTEDQ86YR6 584 aa16.41■□□□□ 0.22
RBMS3-216ENST00000497319 MAP3K1Q13233 1512 aa16.39■□□□□ 0.21
RBMS3-216ENST00000497319 CCER1Q8TC90 406 aaPredicted RBP16.36■□□□□ 0.21
RBMS3-216ENST00000497319 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
RBMS3-216ENST00000497319 EFCAB5A4FU69 1503 aa16.35■□□□□ 0.21
RBMS3-216ENST00000497319 CTTNBP2Q8WZ74 1663 aa16.34■□□□□ 0.21
RBMS3-216ENST00000497319 RTN4Q9NQC3 1192 aaKnown RBP16.34■□□□□ 0.21
RBMS3-216ENST00000497319 SNAPC4Q5SXM2 1469 aa16.34■□□□□ 0.21
RBMS3-216ENST00000497319 AMER1Q5JTC6 1135 aaPredicted RBP16.33■□□□□ 0.2
RBMS3-216ENST00000497319 CAPN15O75808 1086 aa16.32■□□□□ 0.2
RBMS3-216ENST00000497319 FHAD1B1AJZ9 1412 aa16.31■□□□□ 0.2
RBMS3-216ENST00000497319 TDRD9Q8NDG6 1382 aaKnown RBP16.3■□□□□ 0.2
RBMS3-216ENST00000497319 FBLN2P98095 1184 aa16.3■□□□□ 0.2
RBMS3-216ENST00000497319 C1QBPQ07021 282 aaKnown RBP16.3■□□□□ 0.2
RBMS3-216ENST00000497319 TIAM1Q13009 1591 aa16.3■□□□□ 0.2
RBMS3-216ENST00000497319 RRBP1Q9P2E9 1410 aaKnown RBP16.29■□□□□ 0.2
RBMS3-216ENST00000497319 KANK4Q5T7N3 995 aaPredicted RBP16.29■□□□□ 0.2
RBMS3-216ENST00000497319 MKRN4PQ13434 485 aaPredicted RBP16.27■□□□□ 0.2
RBMS3-216ENST00000497319 MAGI1Q96QZ7 1491 aaPredicted RBP16.26■□□□□ 0.19
RBMS3-216ENST00000497319 CFAP43Q8NDM7 1665 aa16.25■□□□□ 0.19
RBMS3-216ENST00000497319 POLA2Q14181 598 aa16.24■□□□□ 0.19
RBMS3-216ENST00000497319 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
RBMS3-216ENST00000497319 PCF11O94913 1555 aaKnown RBP16.23■□□□□ 0.19
RBMS3-216ENST00000497319 ERCC6L2Q5T890 1561 aa16.23■□□□□ 0.19
RBMS3-216ENST00000497319 FYCO1Q9BQS8 1478 aa16.22■□□□□ 0.19
RBMS3-216ENST00000497319 SAMD9Q5K651 1589 aa16.22■□□□□ 0.19
RBMS3-216ENST00000497319 KIF13AQ9H1H9 1805 aa16.22■□□□□ 0.19
RBMS3-216ENST00000497319 CASKIN1Q8WXD9 1431 aa16.21■□□□□ 0.19
RBMS3-216ENST00000497319 SYNJ2O15056 1496 aa16.21■□□□□ 0.19
RBMS3-216ENST00000497319 LRRC9Q6ZRR7 1453 aa16.21■□□□□ 0.19
RBMS3-216ENST00000497319 FHOD3Q2V2M9 1422 aa16.2■□□□□ 0.18
RBMS3-216ENST00000497319 ADAMTS12P58397 1594 aa16.19■□□□□ 0.18
RBMS3-216ENST00000497319 SPDYE4A6NLX3 237 aa16.19■□□□□ 0.18
RBMS3-216ENST00000497319 FMN1Q68DA7 1419 aa16.18■□□□□ 0.18
RBMS3-216ENST00000497319 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
RBMS3-216ENST00000497319 CCNB3Q8WWL7 1395 aa16.17■□□□□ 0.18
RBMS3-216ENST00000497319 P3H3Q8IVL6 736 aa16.12■□□□□ 0.17
RBMS3-216ENST00000497319 CHMP7Q8WUX9 453 aaPredicted RBP16.11■□□□□ 0.17
RBMS3-216ENST00000497319 CLSPNQ9HAW4 1339 aa16.1■□□□□ 0.17
RBMS3-216ENST00000497319 ABCB7O75027 752 aa16.09■□□□□ 0.17
RBMS3-216ENST00000497319 ILDR1Q86SU0 546 aaPredicted RBP16.08■□□□□ 0.16
RBMS3-216ENST00000497319 IQGAP2Q13576 1575 aa16.08■□□□□ 0.16
RBMS3-216ENST00000497319 CEP170Q5SW79 1584 aa16.08■□□□□ 0.16
RBMS3-216ENST00000497319 SHROOM2Q13796 1616 aa16.08■□□□□ 0.16
RBMS3-216ENST00000497319 PHLDB1Q86UU1 1377 aa16.07■□□□□ 0.16
RBMS3-216ENST00000497319 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.05■□□□□ 0.16
RBMS3-216ENST00000497319 UGGT2Q9NYU1 1516 aa16.04■□□□□ 0.16
RBMS3-216ENST00000497319 DHX57Q6P158 1386 aaKnown RBP16.04■□□□□ 0.16
RBMS3-216ENST00000497319 NUP160Q12769 1436 aa16.02■□□□□ 0.16
RBMS3-216ENST00000497319 ZBTB12Q9Y330 459 aaPredicted RBP16.01■□□□□ 0.15
RBMS3-216ENST00000497319 LRRIQ1Q96JM4 1722 aa16.01■□□□□ 0.15
RBMS3-216ENST00000497319 GRIN2AQ12879 1464 aa16■□□□□ 0.15
RBMS3-216ENST00000497319 KDM4FA0A1W2PPD8 638 aa16■□□□□ 0.15
RBMS3-216ENST00000497319 PROM2Q8N271 834 aa16■□□□□ 0.15
RBMS3-216ENST00000497319 FBXO3Q9UK99 471 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms