RNA–Protein interactions for RNA: ENST00000497319.1

RBMS3-216, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 3

Gene RBMS3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-216ENST00000497319 AEBP2Q6ZN18 517 aaPredicted RBP26.93■■□□□ 1.9
RBMS3-216ENST00000497319 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
RBMS3-216ENST00000497319 PHF23Q9BUL5 403 aaPredicted RBP23.7■■□□□ 1.38
RBMS3-216ENST00000497319 NISCHQ9Y2I1 1504 aa23.53■■□□□ 1.36
RBMS3-216ENST00000497319 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
RBMS3-216ENST00000497319 PLPPR3Q6T4P5 718 aa22.08■■□□□ 1.13
RBMS3-216ENST00000497319 FOXD1Q16676 465 aa21.04■□□□□ 0.96
RBMS3-216ENST00000497319 ADRA2BP18089 450 aa20.74■□□□□ 0.91
RBMS3-216ENST00000497319 ABCC9O60706 1549 aa20.73■□□□□ 0.91
RBMS3-216ENST00000497319 PPP6R1Q9UPN7 881 aa20.72■□□□□ 0.91
RBMS3-216ENST00000497319 CCDC180Q9P1Z9 1646 aa20.34■□□□□ 0.85
RBMS3-216ENST00000497319 DNAJC5BQ9UF47 199 aa20.07■□□□□ 0.8
RBMS3-216ENST00000497319 PIAS4Q8N2W9 510 aaPredicted RBP20.01■□□□□ 0.79
RBMS3-216ENST00000497319 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
RBMS3-216ENST00000497319 KCNA4P22459 653 aa19.79■□□□□ 0.76
RBMS3-216ENST00000497319 PPP4R3CPQ6ZMV5 832 aa19.54■□□□□ 0.72
RBMS3-216ENST00000497319 DCAF1Q9Y4B6 1507 aa19.5■□□□□ 0.71
RBMS3-216ENST00000497319 RB1CC1Q8TDY2 1594 aa19.45■□□□□ 0.7
RBMS3-216ENST00000497319 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
RBMS3-216ENST00000497319 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
RBMS3-216ENST00000497319 NACADO15069 1562 aa19.2■□□□□ 0.66
RBMS3-216ENST00000497319 NCBP3Q53F19 620 aaKnown RBP19.18■□□□□ 0.66
RBMS3-216ENST00000497319 DCAF8L2P0C7V8 631 aa19.16■□□□□ 0.66
RBMS3-216ENST00000497319 MSH5O43196 834 aa19.15■□□□□ 0.66
RBMS3-216ENST00000497319 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
RBMS3-216ENST00000497319 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.65
RBMS3-216ENST00000497319 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
RBMS3-216ENST00000497319 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
RBMS3-216ENST00000497319 SLC4A1APQ9BWU0 796 aaKnown RBP18.95■□□□□ 0.62
RBMS3-216ENST00000497319 NPM3O75607 178 aaKnown RBP18.94■□□□□ 0.62
RBMS3-216ENST00000497319 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
RBMS3-216ENST00000497319 SUPT5HO00267 1087 aaKnown RBP18.85■□□□□ 0.61
RBMS3-216ENST00000497319 CNKSR2Q8WXI2 1034 aa18.85■□□□□ 0.61
RBMS3-216ENST00000497319 DNAJC5Q9H3Z4 198 aa18.77■□□□□ 0.6
RBMS3-216ENST00000497319 CC2D2AQ9P2K1 1620 aa18.75■□□□□ 0.59
RBMS3-216ENST00000497319 CECR2Q9BXF3 1484 aa18.73■□□□□ 0.59
RBMS3-216ENST00000497319 SCRIBQ14160 1630 aa18.71■□□□□ 0.59
RBMS3-216ENST00000497319 MAPK8IP2Q13387 824 aaPredicted RBP18.64■□□□□ 0.57
RBMS3-216ENST00000497319 CSRNP3Q8WYN3 585 aa18.59■□□□□ 0.57
RBMS3-216ENST00000497319 EIF4G1Q04637 1599 aaKnown RBP18.57■□□□□ 0.56
RBMS3-216ENST00000497319 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
RBMS3-216ENST00000497319 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.52
RBMS3-216ENST00000497319 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
RBMS3-216ENST00000497319 ZBTB22O15209 634 aa18.24■□□□□ 0.51
RBMS3-216ENST00000497319 MROH2BQ7Z745 1585 aa18.18■□□□□ 0.5
RBMS3-216ENST00000497319 CUX2O14529 1486 aa18.13■□□□□ 0.49
RBMS3-216ENST00000497319 BAZ1AQ9NRL2 1556 aaPredicted RBP18.12■□□□□ 0.49
RBMS3-216ENST00000497319 HOXD11P31277 338 aaPredicted RBP18.09■□□□□ 0.49
RBMS3-216ENST00000497319 WIZO95785 1651 aa18.04■□□□□ 0.48
RBMS3-216ENST00000497319 FOXD4L1Q9NU39 408 aa18.03■□□□□ 0.48
RBMS3-216ENST00000497319 SMARCA4P51532 1647 aa17.99■□□□□ 0.47
RBMS3-216ENST00000497319 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.45
RBMS3-216ENST00000497319 ERCC6Q03468 1493 aa17.83■□□□□ 0.45
RBMS3-216ENST00000497319 PEG3Q9GZU2 1588 aa17.79■□□□□ 0.44
RBMS3-216ENST00000497319 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
RBMS3-216ENST00000497319 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
RBMS3-216ENST00000497319 SLC4A2P04920 1241 aa17.73■□□□□ 0.43
RBMS3-216ENST00000497319 THOC2Q8NI27 1593 aaKnown RBP17.72■□□□□ 0.43
RBMS3-216ENST00000497319 TRIM41Q8WV44 630 aa17.72■□□□□ 0.43
RBMS3-216ENST00000497319 CCDC88BA6NC98 1476 aa17.7■□□□□ 0.42
RBMS3-216ENST00000497319 NESP48681 1621 aa17.7■□□□□ 0.42
RBMS3-216ENST00000497319 ATAD2BQ9ULI0 1458 aa17.62■□□□□ 0.41
RBMS3-216ENST00000497319 LOC105371045A0A1W2PR82 267 aa17.6■□□□□ 0.41
RBMS3-216ENST00000497319 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
RBMS3-216ENST00000497319 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
RBMS3-216ENST00000497319 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
RBMS3-216ENST00000497319 MYCNP04198 464 aaPredicted RBP17.48■□□□□ 0.39
RBMS3-216ENST00000497319 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
RBMS3-216ENST00000497319 ABCC8Q09428 1581 aa17.43■□□□□ 0.38
RBMS3-216ENST00000497319 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
RBMS3-216ENST00000497319 FAM9AQ8IZU1 332 aaPredicted RBP17.37■□□□□ 0.37
RBMS3-216ENST00000497319 ATXN8OSP0DMR3 200 aa17.31■□□□□ 0.36
RBMS3-216ENST00000497319 EEA1Q15075 1411 aa17.3■□□□□ 0.36
RBMS3-216ENST00000497319 WRNQ14191 1432 aaPredicted RBP eCLIP17.29■□□□□ 0.36
RBMS3-216ENST00000497319 WDR62O43379 1518 aa17.28■□□□□ 0.36
RBMS3-216ENST00000497319 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.35
RBMS3-216ENST00000497319 PDS5BQ9NTI5 1447 aa17.24■□□□□ 0.35
RBMS3-216ENST00000497319 MRC2Q9UBG0 1479 aa17.23■□□□□ 0.35
RBMS3-216ENST00000497319 SYNJ1O43426 1573 aa17.21■□□□□ 0.35
RBMS3-216ENST00000497319 PCGF6Q9BYE7 350 aa17.2■□□□□ 0.34
RBMS3-216ENST00000497319 SOGA1O94964 1423 aa17.2■□□□□ 0.34
RBMS3-216ENST00000497319 TRIM26Q12899 539 aaPredicted RBP17.15■□□□□ 0.34
RBMS3-216ENST00000497319 TOP2BQ02880 1626 aa17.12■□□□□ 0.33
RBMS3-216ENST00000497319 CADPSQ9ULU8 1353 aa17.12■□□□□ 0.33
RBMS3-216ENST00000497319 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
RBMS3-216ENST00000497319 BIVM-ERCC5R4GMW8 1640 aa17.11■□□□□ 0.33
RBMS3-216ENST00000497319 HRCP23327 699 aa17.11■□□□□ 0.33
RBMS3-216ENST00000497319 CFTRP13569 1480 aa17.11■□□□□ 0.33
RBMS3-216ENST00000497319 RIMBP3CA6NJZ7 1639 aa17.1■□□□□ 0.33
RBMS3-216ENST00000497319 RIMBP3BA6NNM3 1639 aa17.1■□□□□ 0.33
RBMS3-216ENST00000497319 RIMBP3Q9UFD9 1639 aa17.1■□□□□ 0.33
RBMS3-216ENST00000497319 TNIKQ9UKE5 1360 aa17.09■□□□□ 0.33
RBMS3-216ENST00000497319 U3KPZ7 1027 aaPredicted RBP17.06■□□□□ 0.32
RBMS3-216ENST00000497319 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
RBMS3-216ENST00000497319 PRDM2Q13029 1718 aa17.05■□□□□ 0.32
RBMS3-216ENST00000497319 KIF21BO75037 1637 aa17.05■□□□□ 0.32
RBMS3-216ENST00000497319 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
RBMS3-216ENST00000497319 CEP164Q9UPV0 1460 aa17.01■□□□□ 0.31
RBMS3-216ENST00000497319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
RBMS3-216ENST00000497319 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms