RNA–Protein interactions for RNA: ENST00000495321.1

SMG7-209, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-209ENST00000495321 CCDC88BA6NC98 1476 aa12.55□□□□□ -0.4
SMG7-209ENST00000495321 NESP48681 1621 aa12.55□□□□□ -0.4
SMG7-209ENST00000495321 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
SMG7-209ENST00000495321 MIER1Q8N108 512 aa12.53□□□□□ -0.4
SMG7-209ENST00000495321 PLCD3Q8N3E9 789 aa12.53□□□□□ -0.4
SMG7-209ENST00000495321 CADPSQ9ULU8 1353 aa12.52□□□□□ -0.41
SMG7-209ENST00000495321 IFNLR1Q8IU57 520 aaPredicted RBP12.5□□□□□ -0.41
SMG7-209ENST00000495321 LAMC3Q9Y6N6 1575 aa12.49□□□□□ -0.41
SMG7-209ENST00000495321 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
SMG7-209ENST00000495321 CFTRP13569 1480 aa12.45□□□□□ -0.42
SMG7-209ENST00000495321 PLEKHG5O94827 1062 aa12.44□□□□□ -0.42
SMG7-209ENST00000495321 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMG7-209ENST00000495321 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
SMG7-209ENST00000495321 ERCC6Q03468 1493 aa12.4□□□□□ -0.42
SMG7-209ENST00000495321 KLHL34Q8N239 644 aa12.4□□□□□ -0.42
SMG7-209ENST00000495321 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
SMG7-209ENST00000495321 CHADLQ6NUI6 762 aa12.39□□□□□ -0.43
SMG7-209ENST00000495321 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
SMG7-209ENST00000495321 KIF21AQ7Z4S6 1674 aa12.38□□□□□ -0.43
SMG7-209ENST00000495321 PRKAR2AP13861 404 aaKnown RBP12.37□□□□□ -0.43
SMG7-209ENST00000495321 MNX1P50219 401 aaPredicted RBP12.37□□□□□ -0.43
SMG7-209ENST00000495321 FANCD2Q9BXW9 1451 aa12.35□□□□□ -0.43
SMG7-209ENST00000495321 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
SMG7-209ENST00000495321 SPOCK2Q92563 424 aa12.33□□□□□ -0.44
SMG7-209ENST00000495321 CEP164Q9UPV0 1460 aa12.3□□□□□ -0.44
SMG7-209ENST00000495321 FARP1Q9Y4F1 1045 aaPredicted RBP12.29□□□□□ -0.44
SMG7-209ENST00000495321 THOC2Q8NI27 1593 aaKnown RBP12.28□□□□□ -0.44
SMG7-209ENST00000495321 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
SMG7-209ENST00000495321 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
SMG7-209ENST00000495321 MRC2Q9UBG0 1479 aa12.26□□□□□ -0.45
SMG7-209ENST00000495321 NPM1P06748 294 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMG7-209ENST00000495321 NUBP1P53384 320 aa12.23□□□□□ -0.45
SMG7-209ENST00000495321 URB2Q14146 1524 aaKnown RBP12.22□□□□□ -0.45
SMG7-209ENST00000495321 CUX2O14529 1486 aa12.22□□□□□ -0.45
SMG7-209ENST00000495321 WDR62O43379 1518 aa12.21□□□□□ -0.46
SMG7-209ENST00000495321 RASEFQ8IZ41 740 aa12.17□□□□□ -0.46
SMG7-209ENST00000495321 ABCC8Q09428 1581 aa12.17□□□□□ -0.46
SMG7-209ENST00000495321 TOPBP1Q92547 1522 aa12.16□□□□□ -0.46
SMG7-209ENST00000495321 DNMBPQ6XZF7 1577 aa12.14□□□□□ -0.47
SMG7-209ENST00000495321 PKD2Q13563 968 aa12.13□□□□□ -0.47
SMG7-209ENST00000495321 CUX1P39880 1505 aa12.12□□□□□ -0.47
SMG7-209ENST00000495321 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
SMG7-209ENST00000495321 CIZ1Q9ULV3 898 aaPredicted RBP12.11□□□□□ -0.47
SMG7-209ENST00000495321 GSE1Q14687 1217 aa12.09□□□□□ -0.47
SMG7-209ENST00000495321 DCAF8Q5TAQ9 597 aa12.09□□□□□ -0.47
SMG7-209ENST00000495321 WRNQ14191 1432 aaPredicted RBP eCLIP12.09□□□□□ -0.47
SMG7-209ENST00000495321 POLA1P09884 1462 aaPredicted RBP12.07□□□□□ -0.48
SMG7-209ENST00000495321 FGD5Q6ZNL6 1462 aa12.06□□□□□ -0.48
SMG7-209ENST00000495321 SOGA1O94964 1423 aa12.05□□□□□ -0.48
SMG7-209ENST00000495321 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
SMG7-209ENST00000495321 IFT140Q96RY7 1462 aa12.05□□□□□ -0.48
SMG7-209ENST00000495321 RAD54L2Q9Y4B4 1467 aa12.05□□□□□ -0.48
SMG7-209ENST00000495321 SYNJ1O43426 1573 aa12.05□□□□□ -0.48
SMG7-209ENST00000495321 POTEHQ6S545 545 aa12.04□□□□□ -0.48
SMG7-209ENST00000495321 TOP2BQ02880 1626 aa12.04□□□□□ -0.48
SMG7-209ENST00000495321 BIVM-ERCC5R4GMW8 1640 aa12.04□□□□□ -0.48
SMG7-209ENST00000495321 CD44P16070 742 aaKnown RBP12.03□□□□□ -0.48
SMG7-209ENST00000495321 TARBP1Q13395 1621 aaKnown RBP12.02□□□□□ -0.49
SMG7-209ENST00000495321 C19orf67A6NJJ6 358 aa12.02□□□□□ -0.49
SMG7-209ENST00000495321 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
SMG7-209ENST00000495321 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
SMG7-209ENST00000495321 TRIM41Q8WV44 630 aa12.01□□□□□ -0.49
SMG7-209ENST00000495321 ECM2O94769 699 aaPredicted RBP12□□□□□ -0.49
SMG7-209ENST00000495321 AQRO60306 1485 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMG7-209ENST00000495321 TDRD9Q8NDG6 1382 aaKnown RBP11.98□□□□□ -0.49
SMG7-209ENST00000495321 CCDC61Q9Y6R9 512 aa11.98□□□□□ -0.49
SMG7-209ENST00000495321 HAX1O00165 279 aa11.96□□□□□ -0.49
SMG7-209ENST00000495321 ZRANB1Q9UGI0 708 aa11.96□□□□□ -0.49
SMG7-209ENST00000495321 CHRM1P11229 460 aaPredicted RBP11.95□□□□□ -0.5
SMG7-209ENST00000495321 ABCA10Q8WWZ4 1543 aa11.94□□□□□ -0.5
SMG7-209ENST00000495321 WDR97A6NE52 1622 aa11.93□□□□□ -0.5
SMG7-209ENST00000495321 PYGBP11216 843 aa11.93□□□□□ -0.5
SMG7-209ENST00000495321 EIF4G3O43432 1585 aaKnown RBP11.92□□□□□ -0.5
SMG7-209ENST00000495321 RGL2O15211 777 aa11.91□□□□□ -0.5
SMG7-209ENST00000495321 ZNF579Q8NAF0 562 aaKnown RBP11.9□□□□□ -0.5
SMG7-209ENST00000495321 GAPVD1Q14C86 1478 aa11.89□□□□□ -0.51
SMG7-209ENST00000495321 EVX2Q03828 476 aa11.89□□□□□ -0.51
SMG7-209ENST00000495321 RNF25Q96BH1 459 aaPredicted RBP11.89□□□□□ -0.51
SMG7-209ENST00000495321 PHF12Q96QT6 1004 aa11.89□□□□□ -0.51
SMG7-209ENST00000495321 ABCA5Q8WWZ7 1642 aa11.86□□□□□ -0.51
SMG7-209ENST00000495321 GRIN2BQ13224 1484 aa11.86□□□□□ -0.51
SMG7-209ENST00000495321 PBRM1Q86U86 1689 aa11.85□□□□□ -0.51
SMG7-209ENST00000495321 KIF12Q96FN5 646 aa11.85□□□□□ -0.51
SMG7-209ENST00000495321 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
SMG7-209ENST00000495321 KIF27Q86VH2 1401 aa11.83□□□□□ -0.52
SMG7-209ENST00000495321 RIOK3O14730 519 aaKnown RBP11.82□□□□□ -0.52
SMG7-209ENST00000495321 MAP3K13O43283 966 aa11.82□□□□□ -0.52
SMG7-209ENST00000495321 RUSC2Q8N2Y8 1516 aa11.81□□□□□ -0.52
SMG7-209ENST00000495321 IGF1RP08069 1367 aa11.81□□□□□ -0.52
SMG7-209ENST00000495321 CHMP7Q8WUX9 453 aaPredicted RBP11.81□□□□□ -0.52
SMG7-209ENST00000495321 SGIP1Q9BQI5 828 aa11.8□□□□□ -0.52
SMG7-209ENST00000495321 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
SMG7-209ENST00000495321 MAGI1Q96QZ7 1491 aaPredicted RBP11.8□□□□□ -0.52
SMG7-209ENST00000495321 ERICH3Q5RHP9 1530 aa11.8□□□□□ -0.52
SMG7-209ENST00000495321 ZNF467Q7Z7K2 595 aaPredicted RBP11.79□□□□□ -0.52
SMG7-209ENST00000495321 DNAJC5Q9H3Z4 198 aa11.79□□□□□ -0.52
SMG7-209ENST00000495321 CHD1O14646 1710 aa11.79□□□□□ -0.52
SMG7-209ENST00000495321 PCDHB8Q9UN66 801 aa11.77□□□□□ -0.53
SMG7-209ENST00000495321 SYNJ2O15056 1496 aa11.76□□□□□ -0.53
SMG7-209ENST00000495321 IFNL1Q8IU54 200 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms