RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	KCNH8	Q96L42	1107 aa		19.16	■□□□□ 0.66
SUPT20H-222	ENST00000495071	FGD5	Q6ZNL6	1462 aa		19.16	■□□□□ 0.66
SUPT20H-222	ENST00000495071	PHLDB1	Q86UU1	1377 aa		19.16	■□□□□ 0.66
SUPT20H-222	ENST00000495071	TIAM1	Q13009	1591 aa		19.16	■□□□□ 0.66
SUPT20H-222	ENST00000495071	FHAD1	B1AJZ9	1412 aa		19.15	■□□□□ 0.66
SUPT20H-222	ENST00000495071	LRRC9	Q6ZRR7	1453 aa		19.15	■□□□□ 0.66
SUPT20H-222	ENST00000495071	HIRIP3	Q9BW71	556 aa	Predicted RBP	19.11	■□□□□ 0.65
SUPT20H-222	ENST00000495071	MAPKBP1	O60336	1514 aa		19.09	■□□□□ 0.65
SUPT20H-222	ENST00000495071	BCAN	Q96GW7	911 aa		19.09	■□□□□ 0.65
SUPT20H-222	ENST00000495071	MAP3K1	Q13233	1512 aa		19.08	■□□□□ 0.64
SUPT20H-222	ENST00000495071	FHOD3	Q2V2M9	1422 aa		19.07	■□□□□ 0.64
SUPT20H-222	ENST00000495071	WDR97	A6NE52	1622 aa		19.01	■□□□□ 0.63
SUPT20H-222	ENST00000495071	ANP32C	O43423	234 aa		19.01	■□□□□ 0.63
SUPT20H-222	ENST00000495071	FANCD2	Q9BXW9	1451 aa		19	■□□□□ 0.63
SUPT20H-222	ENST00000495071	NEFL	P07196	543 aa		19	■□□□□ 0.63
SUPT20H-222	ENST00000495071	FKBP8	Q14318	412 aa		19	■□□□□ 0.63
SUPT20H-222	ENST00000495071	TIMELESS	Q9UNS1	1208 aa		18.99	■□□□□ 0.63
SUPT20H-222	ENST00000495071	PCF11	O94913	1555 aa	Known RBP	18.99	■□□□□ 0.63
SUPT20H-222	ENST00000495071	RAD54L2	Q9Y4B4	1467 aa		18.99	■□□□□ 0.63
SUPT20H-222	ENST00000495071	TONSL	Q96HA7	1378 aa		18.98	■□□□□ 0.63
SUPT20H-222	ENST00000495071	PPP1R15A	O75807	674 aa	Predicted RBP	18.97	■□□□□ 0.63
SUPT20H-222	ENST00000495071	MTUS2	Q5JR59	1369 aa		18.97	■□□□□ 0.63
SUPT20H-222	ENST00000495071	PRDM2	Q13029	1718 aa		18.97	■□□□□ 0.63
SUPT20H-222	ENST00000495071	TRIM52	Q96A61	297 aa		18.96	■□□□□ 0.63
SUPT20H-222	ENST00000495071	TSHZ2	Q9NRE2	1034 aa		18.96	■□□□□ 0.63
SUPT20H-222	ENST00000495071	FYCO1	Q9BQS8	1478 aa		18.92	■□□□□ 0.62
SUPT20H-222	ENST00000495071	CASKIN1	Q8WXD9	1431 aa		18.91	■□□□□ 0.62
SUPT20H-222	ENST00000495071	CFAP43	Q8NDM7	1665 aa		18.89	■□□□□ 0.61
SUPT20H-222	ENST00000495071	FMN1	Q68DA7	1419 aa		18.89	■□□□□ 0.61
SUPT20H-222	ENST00000495071	POLA1	P09884	1462 aa	Predicted RBP	18.88	■□□□□ 0.61
SUPT20H-222	ENST00000495071	FGD6	Q6ZV73	1430 aa		18.87	■□□□□ 0.61
SUPT20H-222	ENST00000495071	EFCAB5	A4FU69	1503 aa		18.86	■□□□□ 0.61
SUPT20H-222	ENST00000495071	CCER2	I3L3R5	266 aa		18.86	■□□□□ 0.61
SUPT20H-222	ENST00000495071	ABCA10	Q8WWZ4	1543 aa		18.85	■□□□□ 0.61
SUPT20H-222	ENST00000495071	TOPBP1	Q92547	1522 aa		18.85	■□□□□ 0.61
SUPT20H-222	ENST00000495071	CC2D2A	Q9P2K1	1620 aa		18.85	■□□□□ 0.61
SUPT20H-222	ENST00000495071	DNMBP	Q6XZF7	1577 aa		18.84	■□□□□ 0.61
SUPT20H-222	ENST00000495071	CCDC18	Q5T9S5	1454 aa		18.84	■□□□□ 0.61
SUPT20H-222	ENST00000495071	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
SUPT20H-222	ENST00000495071	TDRD9	Q8NDG6	1382 aa	Known RBP	18.83	■□□□□ 0.6
SUPT20H-222	ENST00000495071	NES	P48681	1621 aa		18.82	■□□□□ 0.6
SUPT20H-222	ENST00000495071	CHIC2	Q9UKJ5	165 aa		18.81	■□□□□ 0.6
SUPT20H-222	ENST00000495071	AQR	O60306	1485 aa	Known RBP eCLIP	18.81	■□□□□ 0.6	8e-6	■■■■□ 23.2
SUPT20H-222	ENST00000495071	RRP7BP	Q9NSQ0	103 aa		18.8	■□□□□ 0.6
SUPT20H-222	ENST00000495071	UACA	Q9BZF9	1416 aa		18.77	■□□□□ 0.6
SUPT20H-222	ENST00000495071	HFM1	A2PYH4	1435 aa		18.76	■□□□□ 0.59
SUPT20H-222	ENST00000495071	CUL7	Q14999	1698 aa		18.75	■□□□□ 0.59
SUPT20H-222	ENST00000495071	ARID3C	A6NKF2	412 aa		18.75	■□□□□ 0.59
SUPT20H-222	ENST00000495071	PTPRK	Q15262	1439 aa		18.75	■□□□□ 0.59
SUPT20H-222	ENST00000495071	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.74	■□□□□ 0.59
SUPT20H-222	ENST00000495071	NCOA2	Q15596	1464 aa		18.73	■□□□□ 0.59
SUPT20H-222	ENST00000495071	MYOM3	Q5VTT5	1437 aa		18.73	■□□□□ 0.59
SUPT20H-222	ENST00000495071	SNAPC4	Q5SXM2	1469 aa		18.71	■□□□□ 0.59
SUPT20H-222	ENST00000495071	NAIP	Q13075	1403 aa		18.7	■□□□□ 0.58
SUPT20H-222	ENST00000495071	CTTNBP2	Q8WZ74	1663 aa		18.7	■□□□□ 0.58
SUPT20H-222	ENST00000495071	ANP32E	Q9BTT0	268 aa		18.7	■□□□□ 0.58
SUPT20H-222	ENST00000495071	GAPVD1	Q14C86	1478 aa		18.68	■□□□□ 0.58
SUPT20H-222	ENST00000495071	PTPN23	Q9H3S7	1636 aa		18.68	■□□□□ 0.58
SUPT20H-222	ENST00000495071	HSPA5	P11021	654 aa	Known RBP	18.66	■□□□□ 0.58
SUPT20H-222	ENST00000495071	URB2	Q14146	1524 aa	Known RBP	18.65	■□□□□ 0.58
SUPT20H-222	ENST00000495071	EIF4G2	P78344	907 aa	Known RBP eCLIP	18.64	■□□□□ 0.58
SUPT20H-222	ENST00000495071	IRX6	P78412	446 aa	Predicted RBP	18.64	■□□□□ 0.57
SUPT20H-222	ENST00000495071	RBM19	Q9Y4C8	960 aa	Known RBP	18.63	■□□□□ 0.57
SUPT20H-222	ENST00000495071	GRIN2B	Q13224	1484 aa		18.61	■□□□□ 0.57
SUPT20H-222	ENST00000495071	EHBP1L1	Q8N3D4	1523 aa		18.61	■□□□□ 0.57
SUPT20H-222	ENST00000495071	SUPT6H	Q7KZ85	1726 aa	Known RBP	18.61	■□□□□ 0.57
SUPT20H-222	ENST00000495071	FOXD1	Q16676	465 aa		18.6	■□□□□ 0.57
SUPT20H-222	ENST00000495071	WASHC2A	Q641Q2	1341 aa		18.59	■□□□□ 0.57
SUPT20H-222	ENST00000495071	MPHOSPH9	Q99550	1183 aa		18.59	■□□□□ 0.57
SUPT20H-222	ENST00000495071	PDS5B	Q9NTI5	1447 aa		18.58	■□□□□ 0.57
SUPT20H-222	ENST00000495071	SAMD9	Q5K651	1589 aa		18.56	■□□□□ 0.56
SUPT20H-222	ENST00000495071	L3MBTL2	Q969R5	705 aa		18.56	■□□□□ 0.56
SUPT20H-222	ENST00000495071	FAM9B	Q8IZU0	186 aa		18.55	■□□□□ 0.56
SUPT20H-222	ENST00000495071	CDK11A	Q9UQ88	783 aa	Predicted RBP	18.53	■□□□□ 0.56
SUPT20H-222	ENST00000495071	LAMC3	Q9Y6N6	1575 aa		18.53	■□□□□ 0.56
SUPT20H-222	ENST00000495071	CNGB1	Q14028	1251 aa	Predicted RBP	18.53	■□□□□ 0.56
SUPT20H-222	ENST00000495071	UGGT2	Q9NYU1	1516 aa		18.53	■□□□□ 0.56
SUPT20H-222	ENST00000495071	THOC2	Q8NI27	1593 aa	Known RBP	18.52	■□□□□ 0.56
SUPT20H-222	ENST00000495071	ABCA5	Q8WWZ7	1642 aa		18.51	■□□□□ 0.55
SUPT20H-222	ENST00000495071	MRS2	Q9HD23	443 aa		18.51	■□□□□ 0.55
SUPT20H-222	ENST00000495071	POLR3GL	Q9BT43	218 aa		18.5	■□□□□ 0.55
SUPT20H-222	ENST00000495071	MAGI3	Q5TCQ9	1506 aa		18.49	■□□□□ 0.55
SUPT20H-222	ENST00000495071	LRRIQ1	Q96JM4	1722 aa		18.49	■□□□□ 0.55
SUPT20H-222	ENST00000495071	SLC4A1AP	Q9BWU0	796 aa	Known RBP	18.49	■□□□□ 0.55
SUPT20H-222	ENST00000495071	DNAJC5B	Q9UF47	199 aa		18.49	■□□□□ 0.55
SUPT20H-222	ENST00000495071	CCDC184	Q52MB2	194 aa		18.46	■□□□□ 0.55
SUPT20H-222	ENST00000495071	EPRS	P07814	1512 aa	Known RBP	18.46	■□□□□ 0.55
SUPT20H-222	ENST00000495071	CDK13	Q14004	1512 aa	Known RBP	18.46	■□□□□ 0.55
SUPT20H-222	ENST00000495071	HECW1	Q76N89	1606 aa		18.45	■□□□□ 0.54
SUPT20H-222	ENST00000495071	ERICH6	Q7L0X2	663 aa		18.45	■□□□□ 0.54
SUPT20H-222	ENST00000495071	CNTLN	Q9NXG0	1405 aa		18.45	■□□□□ 0.54
SUPT20H-222	ENST00000495071	ZNF326	Q5BKZ1	582 aa	Known RBP	18.45	■□□□□ 0.54
SUPT20H-222	ENST00000495071	KDM5B	Q9UGL1	1544 aa		18.45	■□□□□ 0.54
SUPT20H-222	ENST00000495071	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.44	■□□□□ 0.54
SUPT20H-222	ENST00000495071	TCOF1	Q13428	1488 aa	Known RBP	18.44	■□□□□ 0.54
SUPT20H-222	ENST00000495071	C11orf95	C9JLR9	678 aa	Predicted RBP	18.44	■□□□□ 0.54
SUPT20H-222	ENST00000495071	MIA2	Q96PC5	1412 aa		18.43	■□□□□ 0.54
SUPT20H-222	ENST00000495071	CCDC7	Q96M83	1385 aa		18.42	■□□□□ 0.54
SUPT20H-222	ENST00000495071	ARHGEF11	O15085	1522 aa		18.42	■□□□□ 0.54
SUPT20H-222	ENST00000495071	ZNF644	Q9H582	1327 aa	Predicted RBP	18.42	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms