RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 SYNJ1O43426 1573 aa17.75■□□□□ 0.43
TNFRSF9-203ENST00000492571 GRIN2BQ13224 1484 aa17.75■□□□□ 0.43
TNFRSF9-203ENST00000492571 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
TNFRSF9-203ENST00000492571 WDR97A6NE52 1622 aa17.74■□□□□ 0.43
TNFRSF9-203ENST00000492571 SLC4A2P04920 1241 aa17.72■□□□□ 0.43
TNFRSF9-203ENST00000492571 SYNJ2O15056 1496 aa17.71■□□□□ 0.43
TNFRSF9-203ENST00000492571 CLASP1Q7Z460 1538 aa17.7■□□□□ 0.42
TNFRSF9-203ENST00000492571 GAPVD1Q14C86 1478 aa17.64■□□□□ 0.41
TNFRSF9-203ENST00000492571 CUX1P39880 1505 aa17.64■□□□□ 0.41
TNFRSF9-203ENST00000492571 ABCA10Q8WWZ4 1543 aa17.53■□□□□ 0.4
TNFRSF9-203ENST00000492571 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF9-203ENST00000492571 WRNQ14191 1432 aaPredicted RBP eCLIP17.51■□□□□ 0.39
TNFRSF9-203ENST00000492571 GRIN2AQ12879 1464 aa17.48■□□□□ 0.39
TNFRSF9-203ENST00000492571 PBRM1Q86U86 1689 aa17.48■□□□□ 0.39
TNFRSF9-203ENST00000492571 SUPT5HO00267 1087 aaKnown RBP17.47■□□□□ 0.39
TNFRSF9-203ENST00000492571 ABCA5Q8WWZ7 1642 aa17.43■□□□□ 0.38
TNFRSF9-203ENST00000492571 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
TNFRSF9-203ENST00000492571 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
TNFRSF9-203ENST00000492571 NUP160Q12769 1436 aa17.42■□□□□ 0.38
TNFRSF9-203ENST00000492571 CAPN15O75808 1086 aa17.41■□□□□ 0.38
TNFRSF9-203ENST00000492571 JPH4Q96JJ6 628 aa17.39■□□□□ 0.37
TNFRSF9-203ENST00000492571 CEP170Q5SW79 1584 aa17.39■□□□□ 0.37
TNFRSF9-203ENST00000492571 ERCC6L2Q5T890 1561 aa17.37■□□□□ 0.37
TNFRSF9-203ENST00000492571 PRG4Q92954 1404 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF9-203ENST00000492571 ADAMTS12P58397 1594 aa17.35■□□□□ 0.37
TNFRSF9-203ENST00000492571 FAM69CQ0P6D2 419 aa17.34■□□□□ 0.37
TNFRSF9-203ENST00000492571 DSG3P32926 999 aa17.33■□□□□ 0.36
TNFRSF9-203ENST00000492571 ERICH3Q5RHP9 1530 aa17.31■□□□□ 0.36
TNFRSF9-203ENST00000492571 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
TNFRSF9-203ENST00000492571 SHROOM2Q13796 1616 aa17.28■□□□□ 0.36
TNFRSF9-203ENST00000492571 SLC4A1APQ9BWU0 796 aaKnown RBP17.24■□□□□ 0.35
TNFRSF9-203ENST00000492571 BIVM-ERCC5R4GMW8 1640 aa17.23■□□□□ 0.35
TNFRSF9-203ENST00000492571 ABCC10Q5T3U5 1492 aa17.22■□□□□ 0.35
TNFRSF9-203ENST00000492571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF9-203ENST00000492571 HNRNPUL2Q1KMD3 747 aaKnown RBP17.19■□□□□ 0.34
TNFRSF9-203ENST00000492571 MAPKBP1O60336 1514 aa17.15■□□□□ 0.34
TNFRSF9-203ENST00000492571 KIF13AQ9H1H9 1805 aa17.14■□□□□ 0.34
TNFRSF9-203ENST00000492571 APLP2Q06481 763 aa17.14■□□□□ 0.33
TNFRSF9-203ENST00000492571 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF9-203ENST00000492571 KIAA0586Q9BVV6 1533 aa17.12■□□□□ 0.33
TNFRSF9-203ENST00000492571 TTBK1Q5TCY1 1321 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF9-203ENST00000492571 ZNF219Q9P2Y4 722 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF9-203ENST00000492571 RUSC2Q8N2Y8 1516 aa17.1■□□□□ 0.33
TNFRSF9-203ENST00000492571 KDM4FA0A1W2PPD8 638 aa17.09■□□□□ 0.33
TNFRSF9-203ENST00000492571 PTPRGP23470 1445 aa17.09■□□□□ 0.33
TNFRSF9-203ENST00000492571 KIF27Q86VH2 1401 aa17.09■□□□□ 0.33
TNFRSF9-203ENST00000492571 IGF1RP08069 1367 aa17.08■□□□□ 0.32
TNFRSF9-203ENST00000492571 MYCNP04198 464 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF9-203ENST00000492571 DIP2BQ9P265 1576 aa17.07■□□□□ 0.32
TNFRSF9-203ENST00000492571 ABCB7O75027 752 aa17.07■□□□□ 0.32
TNFRSF9-203ENST00000492571 KDM6BO15054 1643 aa17.07■□□□□ 0.32
TNFRSF9-203ENST00000492571 CARMIL2Q6F5E8 1435 aa17.05■□□□□ 0.32
TNFRSF9-203ENST00000492571 ADCY10Q96PN6 1610 aa17.05■□□□□ 0.32
TNFRSF9-203ENST00000492571 TNIKQ9UKE5 1360 aa17.01■□□□□ 0.31
TNFRSF9-203ENST00000492571 CARMIL1Q5VZK9 1371 aa17■□□□□ 0.31
TNFRSF9-203ENST00000492571 FOXD4L1Q9NU39 408 aa16.98■□□□□ 0.31
TNFRSF9-203ENST00000492571 PLB1Q6P1J6 1458 aa16.98■□□□□ 0.31
TNFRSF9-203ENST00000492571 CUL7Q14999 1698 aa16.97■□□□□ 0.31
TNFRSF9-203ENST00000492571 ABCC2Q92887 1545 aa16.95■□□□□ 0.3
TNFRSF9-203ENST00000492571 ASXL2Q76L83 1435 aa16.95■□□□□ 0.3
TNFRSF9-203ENST00000492571 TSPOAP1O95153 1857 aa16.94■□□□□ 0.3
TNFRSF9-203ENST00000492571 ILDR1Q86SU0 546 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF9-203ENST00000492571 UACAQ9BZF9 1416 aa16.9■□□□□ 0.3
TNFRSF9-203ENST00000492571 UHRF1BP1LA0JNW5 1464 aa16.87■□□□□ 0.29
TNFRSF9-203ENST00000492571 ZBTB22O15209 634 aa16.87■□□□□ 0.29
TNFRSF9-203ENST00000492571 GLI2P10070 1586 aa16.86■□□□□ 0.29
TNFRSF9-203ENST00000492571 TEX14Q8IWB6 1497 aa16.85■□□□□ 0.29
TNFRSF9-203ENST00000492571 IQGAP2Q13576 1575 aa16.85■□□□□ 0.29
TNFRSF9-203ENST00000492571 ADGRL1O94910 1474 aa16.84■□□□□ 0.29
TNFRSF9-203ENST00000492571 FAM9AQ8IZU1 332 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF9-203ENST00000492571 EPRSP07814 1512 aaKnown RBP16.8■□□□□ 0.28
TNFRSF9-203ENST00000492571 ATF5Q9Y2D1 282 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF9-203ENST00000492571 KDM5BQ9UGL1 1544 aa16.79■□□□□ 0.28
TNFRSF9-203ENST00000492571 DISP1Q96F81 1524 aa16.78■□□□□ 0.28
TNFRSF9-203ENST00000492571 RAPGEF2Q9Y4G8 1499 aa16.77■□□□□ 0.28
TNFRSF9-203ENST00000492571 COL17A1Q9UMD9 1497 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF9-203ENST00000492571 KCNH8Q96L42 1107 aa16.76■□□□□ 0.27
TNFRSF9-203ENST00000492571 POLA2Q14181 598 aa16.75■□□□□ 0.27
TNFRSF9-203ENST00000492571 UGGT2Q9NYU1 1516 aa16.73■□□□□ 0.27
TNFRSF9-203ENST00000492571 WDR7Q9Y4E6 1490 aa16.72■□□□□ 0.27
TNFRSF9-203ENST00000492571 PPRC1Q5VV67 1664 aaKnown RBP16.72■□□□□ 0.27
TNFRSF9-203ENST00000492571 CD109Q6YHK3 1445 aa16.71■□□□□ 0.27
TNFRSF9-203ENST00000492571 MAP3K4Q9Y6R4 1608 aa16.7■□□□□ 0.26
TNFRSF9-203ENST00000492571 ZCCHC11Q5TAX3 1644 aaKnown RBP16.68■□□□□ 0.26
TNFRSF9-203ENST00000492571 GOLGA3Q08378 1498 aa16.67■□□□□ 0.26
TNFRSF9-203ENST00000492571 KIAA0556O60303 1618 aa16.67■□□□□ 0.26
TNFRSF9-203ENST00000492571 HECW2Q9P2P5 1572 aa16.66■□□□□ 0.26
TNFRSF9-203ENST00000492571 MAGI3Q5TCQ9 1506 aa16.65■□□□□ 0.26
TNFRSF9-203ENST00000492571 PHLDB1Q86UU1 1377 aa16.58■□□□□ 0.24
TNFRSF9-203ENST00000492571 ARID3CA6NKF2 412 aa16.57■□□□□ 0.24
TNFRSF9-203ENST00000492571 FBXO41Q8TF61 875 aa16.56■□□□□ 0.24
TNFRSF9-203ENST00000492571 CFAP43Q8NDM7 1665 aa16.56■□□□□ 0.24
TNFRSF9-203ENST00000492571 P3H3Q8IVL6 736 aa16.55■□□□□ 0.24
TNFRSF9-203ENST00000492571 ARID4BQ4LE39 1312 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF9-203ENST00000492571 ABCA8O94911 1581 aa16.53■□□□□ 0.24
TNFRSF9-203ENST00000492571 ARAP3Q8WWN8 1544 aa16.52■□□□□ 0.24
TNFRSF9-203ENST00000492571 RAPGEF3O95398 923 aa16.49■□□□□ 0.23
TNFRSF9-203ENST00000492571 CTTNBP2Q8WZ74 1663 aa16.48■□□□□ 0.23
TNFRSF9-203ENST00000492571 ATP10BO94823 1461 aa16.48■□□□□ 0.23
TNFRSF9-203ENST00000492571 PRXQ9BXM0 1461 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms