RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 VASPP50552 380 aaPredicted RBP17.6■□□□□ 0.41
EPHB4-208ENST00000492403 FBLN2P98095 1184 aa17.58■□□□□ 0.4
EPHB4-208ENST00000492403 EIF4G3O43432 1585 aaKnown RBP17.57■□□□□ 0.4
EPHB4-208ENST00000492403 POLA1P09884 1462 aaPredicted RBP17.52■□□□□ 0.4
EPHB4-208ENST00000492403 SOGA1O94964 1423 aa17.52■□□□□ 0.4
EPHB4-208ENST00000492403 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.393e-7■■■■■ 30.4
EPHB4-208ENST00000492403 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
EPHB4-208ENST00000492403 PRKCSHP14314 528 aaPredicted RBP17.48■□□□□ 0.39
EPHB4-208ENST00000492403 PROM2Q8N271 834 aa17.48■□□□□ 0.39
EPHB4-208ENST00000492403 RAD54L2Q9Y4B4 1467 aa17.46■□□□□ 0.39
EPHB4-208ENST00000492403 APLP2Q06481 763 aa17.46■□□□□ 0.39
EPHB4-208ENST00000492403 CHD1O14646 1710 aa17.46■□□□□ 0.39
EPHB4-208ENST00000492403 RIMBP3CA6NJZ7 1639 aa17.46■□□□□ 0.39
EPHB4-208ENST00000492403 RIMBP3BA6NNM3 1639 aa17.46■□□□□ 0.39
EPHB4-208ENST00000492403 RIMBP3Q9UFD9 1639 aa17.46■□□□□ 0.39
EPHB4-208ENST00000492403 FGD5Q6ZNL6 1462 aa17.45■□□□□ 0.38
EPHB4-208ENST00000492403 VSIG10Q8N0Z9 540 aa17.45■□□□□ 0.38
EPHB4-208ENST00000492403 TDRD9Q8NDG6 1382 aaKnown RBP17.44■□□□□ 0.38
EPHB4-208ENST00000492403 IFNLR1Q8IU57 520 aaPredicted RBP17.44■□□□□ 0.38
EPHB4-208ENST00000492403 CHMP7Q8WUX9 453 aaPredicted RBP17.42■□□□□ 0.38
EPHB4-208ENST00000492403 TAOK2Q9UL54 1235 aa17.42■□□□□ 0.38
EPHB4-208ENST00000492403 WDR97A6NE52 1622 aa17.41■□□□□ 0.38
EPHB4-208ENST00000492403 ARHGEF11O15085 1522 aa17.4■□□□□ 0.38
EPHB4-208ENST00000492403 CUX1P39880 1505 aa17.4■□□□□ 0.38
EPHB4-208ENST00000492403 MKRN4PQ13434 485 aaPredicted RBP17.39■□□□□ 0.37
EPHB4-208ENST00000492403 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
EPHB4-208ENST00000492403 PKD2Q13563 968 aa17.36■□□□□ 0.37
EPHB4-208ENST00000492403 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
EPHB4-208ENST00000492403 GRIN2BQ13224 1484 aa17.35■□□□□ 0.37
EPHB4-208ENST00000492403 MAGI1Q96QZ7 1491 aaPredicted RBP17.33■□□□□ 0.37
EPHB4-208ENST00000492403 SYNJ1O43426 1573 aa17.31■□□□□ 0.36
EPHB4-208ENST00000492403 GAPVD1Q14C86 1478 aa17.3■□□□□ 0.36
EPHB4-208ENST00000492403 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
EPHB4-208ENST00000492403 TRHP20396 242 aaPredicted RBP17.27■□□□□ 0.36
EPHB4-208ENST00000492403 SYNJ2O15056 1496 aa17.26■□□□□ 0.35
EPHB4-208ENST00000492403 WRNQ14191 1432 aaPredicted RBP eCLIP17.26■□□□□ 0.35
EPHB4-208ENST00000492403 ABCA10Q8WWZ4 1543 aa17.23■□□□□ 0.35
EPHB4-208ENST00000492403 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.23■□□□□ 0.35
EPHB4-208ENST00000492403 ARAP1Q96P48 1450 aa17.19■□□□□ 0.34
EPHB4-208ENST00000492403 ABCA5Q8WWZ7 1642 aa17.18■□□□□ 0.34
EPHB4-208ENST00000492403 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
EPHB4-208ENST00000492403 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
EPHB4-208ENST00000492403 CLASP1Q7Z460 1538 aa17.17■□□□□ 0.34
EPHB4-208ENST00000492403 TPRNQ4KMQ1 711 aa17.17■□□□□ 0.34
EPHB4-208ENST00000492403 BBXQ8WY36 941 aaPredicted RBP17.17■□□□□ 0.34
EPHB4-208ENST00000492403 KDM2AQ9Y2K7 1162 aa17.13■□□□□ 0.33
EPHB4-208ENST00000492403 PAXIP1Q6ZW49 1069 aaPredicted RBP17.1■□□□□ 0.33
EPHB4-208ENST00000492403 GRIN2AQ12879 1464 aa17.09■□□□□ 0.33
EPHB4-208ENST00000492403 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
EPHB4-208ENST00000492403 ADAMTS12P58397 1594 aa17.06■□□□□ 0.32
EPHB4-208ENST00000492403 ECM2O94769 699 aaPredicted RBP17.06■□□□□ 0.32
EPHB4-208ENST00000492403 CFAP44Q96MT7 982 aa17.06■□□□□ 0.32
EPHB4-208ENST00000492403 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
EPHB4-208ENST00000492403 SPOCK2Q92563 424 aa17.05■□□□□ 0.32
EPHB4-208ENST00000492403 KLHL34Q8N239 644 aa17.04■□□□□ 0.32
EPHB4-208ENST00000492403 NPM1P06748 294 aaKnown RBP eCLIP17.01■□□□□ 0.31
EPHB4-208ENST00000492403 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
EPHB4-208ENST00000492403 POLA2Q14181 598 aa16.98■□□□□ 0.31
EPHB4-208ENST00000492403 NUP160Q12769 1436 aa16.97■□□□□ 0.31
EPHB4-208ENST00000492403 KIF27Q86VH2 1401 aa16.93■□□□□ 0.3
EPHB4-208ENST00000492403 JPH4Q96JJ6 628 aa16.92■□□□□ 0.3
EPHB4-208ENST00000492403 PRG4Q92954 1404 aaPredicted RBP16.9■□□□□ 0.3
EPHB4-208ENST00000492403 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.3
EPHB4-208ENST00000492403 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
EPHB4-208ENST00000492403 SPRYD3Q8NCJ5 442 aa16.88■□□□□ 0.29
EPHB4-208ENST00000492403 CUL7Q14999 1698 aa16.87■□□□□ 0.29
EPHB4-208ENST00000492403 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
EPHB4-208ENST00000492403 TSHZ2Q9NRE2 1034 aa16.84■□□□□ 0.29
EPHB4-208ENST00000492403 RGL2O15211 777 aa16.83■□□□□ 0.28
EPHB4-208ENST00000492403 RUSC2Q8N2Y8 1516 aa16.82■□□□□ 0.28
EPHB4-208ENST00000492403 IGF1RP08069 1367 aa16.81■□□□□ 0.28
EPHB4-208ENST00000492403 ZBTB12Q9Y330 459 aaPredicted RBP16.8■□□□□ 0.28
EPHB4-208ENST00000492403 KIAA0586Q9BVV6 1533 aa16.78■□□□□ 0.28
EPHB4-208ENST00000492403 CARMIL1Q5VZK9 1371 aa16.77■□□□□ 0.28
EPHB4-208ENST00000492403 TTBK1Q5TCY1 1321 aaPredicted RBP16.77■□□□□ 0.28
EPHB4-208ENST00000492403 STAG3Q9UJ98 1225 aa16.77■□□□□ 0.28
EPHB4-208ENST00000492403 CAPN15O75808 1086 aa16.76■□□□□ 0.27
EPHB4-208ENST00000492403 PLCD3Q8N3E9 789 aa16.76■□□□□ 0.27
EPHB4-208ENST00000492403 CARMIL2Q6F5E8 1435 aa16.73■□□□□ 0.27
EPHB4-208ENST00000492403 FAM69CQ0P6D2 419 aa16.7■□□□□ 0.26
EPHB4-208ENST00000492403 NBR1Q14596 966 aa16.68■□□□□ 0.26
EPHB4-208ENST00000492403 PTPRGP23470 1445 aa16.68■□□□□ 0.26
EPHB4-208ENST00000492403 CHGAP10645 457 aaKnown RBP16.67■□□□□ 0.26
EPHB4-208ENST00000492403 IQGAP2Q13576 1575 aa16.66■□□□□ 0.26
EPHB4-208ENST00000492403 KIF13AQ9H1H9 1805 aa16.65■□□□□ 0.26
EPHB4-208ENST00000492403 FAM9AQ8IZU1 332 aaPredicted RBP16.64■□□□□ 0.25
EPHB4-208ENST00000492403 TNIKQ9UKE5 1360 aa16.64■□□□□ 0.25
EPHB4-208ENST00000492403 ADCY10Q96PN6 1610 aa16.63■□□□□ 0.25
EPHB4-208ENST00000492403 RAPGEF2Q9Y4G8 1499 aa16.63■□□□□ 0.25
EPHB4-208ENST00000492403 MAPKBP1O60336 1514 aa16.62■□□□□ 0.25
EPHB4-208ENST00000492403 MIER1Q8N108 512 aa16.61■□□□□ 0.25
EPHB4-208ENST00000492403 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
EPHB4-208ENST00000492403 ABCC10Q5T3U5 1492 aa16.61■□□□□ 0.25
EPHB4-208ENST00000492403 CIZ1Q9ULV3 898 aaPredicted RBP16.59■□□□□ 0.25
EPHB4-208ENST00000492403 ABCB7O75027 752 aa16.56■□□□□ 0.24
EPHB4-208ENST00000492403 DIP2BQ9P265 1576 aa16.55■□□□□ 0.24
EPHB4-208ENST00000492403 TSPOAP1O95153 1857 aa16.54■□□□□ 0.24
EPHB4-208ENST00000492403 ABCC2Q92887 1545 aa16.53■□□□□ 0.24
EPHB4-208ENST00000492403 CTTNBP2Q8WZ74 1663 aa16.52■□□□□ 0.23
EPHB4-208ENST00000492403 UACAQ9BZF9 1416 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms