RNA–Protein interactions for RNA: ENST00000491789.1

VPS45-209, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 976 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-209ENST00000491789 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
VPS45-209ENST00000491789 TOPBP1Q92547 1522 aa12.38□□□□□ -0.43
VPS45-209ENST00000491789 ZNF608Q9ULD9 1512 aaPredicted RBP12.38□□□□□ -0.43
VPS45-209ENST00000491789 CSRNP3Q8WYN3 585 aa12.36□□□□□ -0.43
VPS45-209ENST00000491789 IFT140Q96RY7 1462 aa12.35□□□□□ -0.43
VPS45-209ENST00000491789 ABCC8Q09428 1581 aa12.32□□□□□ -0.44
VPS45-209ENST00000491789 DNMBPQ6XZF7 1577 aa12.32□□□□□ -0.44
VPS45-209ENST00000491789 TARBP1Q13395 1621 aaKnown RBP12.31□□□□□ -0.44
VPS45-209ENST00000491789 AKT1S1Q96B36 256 aa12.3□□□□□ -0.44
VPS45-209ENST00000491789 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
VPS45-209ENST00000491789 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.444e-6■■■■■ 31
VPS45-209ENST00000491789 RIMBP3CA6NJZ7 1639 aa12.27□□□□□ -0.44
VPS45-209ENST00000491789 RIMBP3BA6NNM3 1639 aa12.27□□□□□ -0.44
VPS45-209ENST00000491789 RIMBP3Q9UFD9 1639 aa12.27□□□□□ -0.44
VPS45-209ENST00000491789 FBLN2P98095 1184 aa12.27□□□□□ -0.45
VPS45-209ENST00000491789 POLA1P09884 1462 aaPredicted RBP12.26□□□□□ -0.45
VPS45-209ENST00000491789 CHD1O14646 1710 aa12.25□□□□□ -0.45
VPS45-209ENST00000491789 RAD54L2Q9Y4B4 1467 aa12.24□□□□□ -0.45
VPS45-209ENST00000491789 HAX1O00165 279 aa12.22□□□□□ -0.45
VPS45-209ENST00000491789 PIP4P2Q8N4L2 257 aa12.22□□□□□ -0.45
VPS45-209ENST00000491789 SOGA1O94964 1423 aa12.2□□□□□ -0.46
VPS45-209ENST00000491789 ARHGEF11O15085 1522 aa12.2□□□□□ -0.46
VPS45-209ENST00000491789 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
VPS45-209ENST00000491789 CUX1P39880 1505 aa12.18□□□□□ -0.46
VPS45-209ENST00000491789 FGD5Q6ZNL6 1462 aa12.18□□□□□ -0.46
VPS45-209ENST00000491789 REM2Q8IYK8 340 aaPredicted RBP12.14□□□□□ -0.47
VPS45-209ENST00000491789 WDR97A6NE52 1622 aa12.14□□□□□ -0.47
VPS45-209ENST00000491789 CYB5RLQ6IPT4 315 aa12.13□□□□□ -0.47
VPS45-209ENST00000491789 SNAPC4Q5SXM2 1469 aa12.11□□□□□ -0.47
VPS45-209ENST00000491789 PBRM1Q86U86 1689 aa12.09□□□□□ -0.47
VPS45-209ENST00000491789 ARAP1Q96P48 1450 aa12.08□□□□□ -0.47
VPS45-209ENST00000491789 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
VPS45-209ENST00000491789 GRIN2BQ13224 1484 aa12.07□□□□□ -0.48
VPS45-209ENST00000491789 CLASP1Q7Z460 1538 aa12.06□□□□□ -0.48
VPS45-209ENST00000491789 MAGI1Q96QZ7 1491 aaPredicted RBP12.06□□□□□ -0.48
VPS45-209ENST00000491789 GAPVD1Q14C86 1478 aa12.04□□□□□ -0.48
VPS45-209ENST00000491789 FXR2P51116 673 aaKnown RBP eCLIP12.04□□□□□ -0.48
VPS45-209ENST00000491789 ABCA5Q8WWZ7 1642 aa12.04□□□□□ -0.48
VPS45-209ENST00000491789 SYNJ2O15056 1496 aa12.03□□□□□ -0.48
VPS45-209ENST00000491789 ABCA10Q8WWZ4 1543 aa12.03□□□□□ -0.48
VPS45-209ENST00000491789 SPDYE2BA6NHP3 402 aa12.03□□□□□ -0.48
VPS45-209ENST00000491789 PITPNM1O00562 1244 aa12.03□□□□□ -0.48
VPS45-209ENST00000491789 SPDYE6P0CI01 402 aa12.03□□□□□ -0.48
VPS45-209ENST00000491789 SPDYE2Q495Y8 402 aa12.03□□□□□ -0.48
VPS45-209ENST00000491789 SYNJ1O43426 1573 aa12.03□□□□□ -0.48
VPS45-209ENST00000491789 BIVM-ERCC5R4GMW8 1640 aa12□□□□□ -0.49
VPS45-209ENST00000491789 MKRN4PQ13434 485 aaPredicted RBP11.99□□□□□ -0.49
VPS45-209ENST00000491789 TOP2BQ02880 1626 aa11.98□□□□□ -0.49
VPS45-209ENST00000491789 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.49
VPS45-209ENST00000491789 WRNQ14191 1432 aaPredicted RBP eCLIP11.95□□□□□ -0.5
VPS45-209ENST00000491789 ERCC6L2Q5T890 1561 aa11.93□□□□□ -0.5
VPS45-209ENST00000491789 GRIN2AQ12879 1464 aa11.92□□□□□ -0.5
VPS45-209ENST00000491789 ADAMTS12P58397 1594 aa11.92□□□□□ -0.5
VPS45-209ENST00000491789 CEP170Q5SW79 1584 aa11.92□□□□□ -0.5
VPS45-209ENST00000491789 EVX2Q03828 476 aa11.9□□□□□ -0.5
VPS45-209ENST00000491789 NUP160Q12769 1436 aa11.89□□□□□ -0.51
VPS45-209ENST00000491789 FHAD1B1AJZ9 1412 aa11.87□□□□□ -0.51
VPS45-209ENST00000491789 EEA1Q15075 1411 aa11.87□□□□□ -0.51
VPS45-209ENST00000491789 ERICH3Q5RHP9 1530 aa11.87□□□□□ -0.51
VPS45-209ENST00000491789 SHROOM2Q13796 1616 aa11.87□□□□□ -0.51
VPS45-209ENST00000491789 SSUH2Q9Y2M2 353 aa11.82□□□□□ -0.52
VPS45-209ENST00000491789 SPDYE1Q8NFV5 336 aaPredicted RBP11.81□□□□□ -0.52
VPS45-209ENST00000491789 CLEC11AQ9Y240 323 aa11.81□□□□□ -0.52
VPS45-209ENST00000491789 JPH4Q96JJ6 628 aa11.8□□□□□ -0.52
VPS45-209ENST00000491789 PRG4Q92954 1404 aaPredicted RBP11.77□□□□□ -0.52
VPS45-209ENST00000491789 LHX8Q68G74 356 aa11.77□□□□□ -0.53
VPS45-209ENST00000491789 KIF13AQ9H1H9 1805 aa11.76□□□□□ -0.53
VPS45-209ENST00000491789 IGF1RP08069 1367 aa11.76□□□□□ -0.53
VPS45-209ENST00000491789 RUSC2Q8N2Y8 1516 aa11.76□□□□□ -0.53
VPS45-209ENST00000491789 PRKAR2AP13861 404 aaKnown RBP11.74□□□□□ -0.53
VPS45-209ENST00000491789 KIF27Q86VH2 1401 aa11.71□□□□□ -0.53
VPS45-209ENST00000491789 LOC105371045A0A1W2PR82 267 aa11.7□□□□□ -0.54
VPS45-209ENST00000491789 CUL7Q14999 1698 aa11.7□□□□□ -0.54
VPS45-209ENST00000491789 KIAA0586Q9BVV6 1533 aa11.69□□□□□ -0.54
VPS45-209ENST00000491789 C19orf67A6NJJ6 358 aa11.68□□□□□ -0.54
VPS45-209ENST00000491789 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
VPS45-209ENST00000491789 GABBR2O75899 941 aa11.67□□□□□ -0.54
VPS45-209ENST00000491789 ADCY10Q96PN6 1610 aa11.67□□□□□ -0.54
VPS45-209ENST00000491789 CARMIL1Q5VZK9 1371 aa11.66□□□□□ -0.54
VPS45-209ENST00000491789 FAM9AQ8IZU1 332 aaPredicted RBP11.65□□□□□ -0.54
VPS45-209ENST00000491789 KIF21BO75037 1637 aa11.64□□□□□ -0.55
VPS45-209ENST00000491789 GOLGA3Q08378 1498 aa11.63□□□□□ -0.55
VPS45-209ENST00000491789 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
VPS45-209ENST00000491789 ABCC10Q5T3U5 1492 aa11.63□□□□□ -0.55
VPS45-209ENST00000491789 FAM69CQ0P6D2 419 aa11.62□□□□□ -0.55
VPS45-209ENST00000491789 MAPKBP1O60336 1514 aa11.61□□□□□ -0.55
VPS45-209ENST00000491789 NPM1P06748 294 aaKnown RBP eCLIP11.61□□□□□ -0.55
VPS45-209ENST00000491789 TNIKQ9UKE5 1360 aa11.61□□□□□ -0.55
VPS45-209ENST00000491789 DIP2BQ9P265 1576 aa11.61□□□□□ -0.55
VPS45-209ENST00000491789 TSPOAP1O95153 1857 aa11.61□□□□□ -0.55
VPS45-209ENST00000491789 PLSCR2Q9NRY7 297 aa11.6□□□□□ -0.55
VPS45-209ENST00000491789 TTBK1Q5TCY1 1321 aaPredicted RBP11.59□□□□□ -0.55
VPS45-209ENST00000491789 PTPRGP23470 1445 aa11.58□□□□□ -0.56
VPS45-209ENST00000491789 IQGAP2Q13576 1575 aa11.57□□□□□ -0.56
VPS45-209ENST00000491789 DISP1Q96F81 1524 aa11.55□□□□□ -0.56
VPS45-209ENST00000491789 STAG3Q9UJ98 1225 aa11.54□□□□□ -0.56
VPS45-209ENST00000491789 RAPGEF2Q9Y4G8 1499 aa11.54□□□□□ -0.56
VPS45-209ENST00000491789 CARMIL2Q6F5E8 1435 aa11.53□□□□□ -0.56
VPS45-209ENST00000491789 CEP162Q5TB80 1403 aa11.52□□□□□ -0.56
VPS45-209ENST00000491789 ABCC2Q92887 1545 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms