RNA–Protein interactions for RNA: ENST00000491789.1

VPS45-209, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 976 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-209ENST00000491789 AEBP2Q6ZN18 517 aaPredicted RBP22.15■■□□□ 1.14
VPS45-209ENST00000491789 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
VPS45-209ENST00000491789 SENP3Q9H4L4 574 aaPredicted RBP19.12■□□□□ 0.65
VPS45-209ENST00000491789 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
VPS45-209ENST00000491789 FOXD1Q16676 465 aa17.82■□□□□ 0.44
VPS45-209ENST00000491789 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
VPS45-209ENST00000491789 MSH5O43196 834 aa17.02■□□□□ 0.32
VPS45-209ENST00000491789 NISCHQ9Y2I1 1504 aa16.83■□□□□ 0.28
VPS45-209ENST00000491789 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
VPS45-209ENST00000491789 PIAS4Q8N2W9 510 aaPredicted RBP16.57■□□□□ 0.24
VPS45-209ENST00000491789 ADRA2BP18089 450 aa16.22■□□□□ 0.19
VPS45-209ENST00000491789 PPP6R1Q9UPN7 881 aa16.2■□□□□ 0.18
VPS45-209ENST00000491789 ABCC9O60706 1549 aa15.09■□□□□ 0.01
VPS45-209ENST00000491789 CCDC180Q9P1Z9 1646 aa15.09■□□□□ 0.01
VPS45-209ENST00000491789 DMRT2Q9Y5R5 561 aa15.02■□□□□ -0
VPS45-209ENST00000491789 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
VPS45-209ENST00000491789 CACNB1Q02641 598 aaPredicted RBP14.99□□□□□ -0.01
VPS45-209ENST00000491789 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
VPS45-209ENST00000491789 PPP4R3CPQ6ZMV5 832 aa14.73□□□□□ -0.05
VPS45-209ENST00000491789 DCAF8L1A6NGE4 600 aa14.51□□□□□ -0.09
VPS45-209ENST00000491789 CNKSR2Q8WXI2 1034 aa14.43□□□□□ -0.1
VPS45-209ENST00000491789 RNF39Q9H2S5 420 aa14.39□□□□□ -0.11
VPS45-209ENST00000491789 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
VPS45-209ENST00000491789 NCBP3Q53F19 620 aaKnown RBP14.33□□□□□ -0.12
VPS45-209ENST00000491789 DNAJC5BQ9UF47 199 aa14.25□□□□□ -0.13
VPS45-209ENST00000491789 NACADO15069 1562 aa14.25□□□□□ -0.13
VPS45-209ENST00000491789 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
VPS45-209ENST00000491789 HOXD11P31277 338 aaPredicted RBP14.22□□□□□ -0.13
VPS45-209ENST00000491789 DCAF8L2P0C7V8 631 aa14.21□□□□□ -0.13
VPS45-209ENST00000491789 C1QBPQ07021 282 aaKnown RBP14.2□□□□□ -0.14
VPS45-209ENST00000491789 UNC13AQ9UPW8 1703 aa14.16□□□□□ -0.14
VPS45-209ENST00000491789 PABPN1Q86U42 306 aaKnown RBP eCLIP14.08□□□□□ -0.16
VPS45-209ENST00000491789 MYO15BQ96JP2 1530 aa14.04□□□□□ -0.16
VPS45-209ENST00000491789 BICRAQ9NZM4 1560 aa14□□□□□ -0.17
VPS45-209ENST00000491789 NPM3O75607 178 aaKnown RBP13.99□□□□□ -0.17
VPS45-209ENST00000491789 ZCCHC6Q5VYS8 1495 aaKnown RBP13.93□□□□□ -0.18
VPS45-209ENST00000491789 KCNA4P22459 653 aa13.91□□□□□ -0.18
VPS45-209ENST00000491789 DCAF1Q9Y4B6 1507 aa13.87□□□□□ -0.19
VPS45-209ENST00000491789 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
VPS45-209ENST00000491789 POTEHQ6S545 545 aa13.71□□□□□ -0.21
VPS45-209ENST00000491789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.7□□□□□ -0.22
VPS45-209ENST00000491789 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
VPS45-209ENST00000491789 CC2D2AQ9P2K1 1620 aa13.65□□□□□ -0.22
VPS45-209ENST00000491789 EIF4G1Q04637 1599 aaKnown RBP13.61□□□□□ -0.23
VPS45-209ENST00000491789 CECR2Q9BXF3 1484 aa13.57□□□□□ -0.24
VPS45-209ENST00000491789 U3KPZ7 1027 aaPredicted RBP13.3□□□□□ -0.28
VPS45-209ENST00000491789 CAPN15O75808 1086 aa13.26□□□□□ -0.29
VPS45-209ENST00000491789 DSG3P32926 999 aa13.26□□□□□ -0.29
VPS45-209ENST00000491789 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
VPS45-209ENST00000491789 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
VPS45-209ENST00000491789 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
VPS45-209ENST00000491789 SPINK5Q9NQ38 1064 aaPredicted RBP13.16□□□□□ -0.3
VPS45-209ENST00000491789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
VPS45-209ENST00000491789 APLP2Q06481 763 aa13.15□□□□□ -0.3
VPS45-209ENST00000491789 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
VPS45-209ENST00000491789 ATAD2BQ9ULI0 1458 aa13.13□□□□□ -0.31
VPS45-209ENST00000491789 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
VPS45-209ENST00000491789 SMARCA2P51531 1590 aa13.06□□□□□ -0.32
VPS45-209ENST00000491789 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
VPS45-209ENST00000491789 HMGXB3Q12766 1538 aa13.04□□□□□ -0.32
VPS45-209ENST00000491789 BAZ1AQ9NRL2 1556 aaPredicted RBP13.03□□□□□ -0.32
VPS45-209ENST00000491789 DNAJC5Q9H3Z4 198 aa13.01□□□□□ -0.33
VPS45-209ENST00000491789 NESP48681 1621 aa13□□□□□ -0.33
VPS45-209ENST00000491789 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
VPS45-209ENST00000491789 MROH2BQ7Z745 1585 aa12.99□□□□□ -0.33
VPS45-209ENST00000491789 PEG3Q9GZU2 1588 aa12.99□□□□□ -0.33
VPS45-209ENST00000491789 TRHP20396 242 aaPredicted RBP12.98□□□□□ -0.33
VPS45-209ENST00000491789 ERCC6Q03468 1493 aa12.97□□□□□ -0.33
VPS45-209ENST00000491789 BAZ1BQ9UIG0 1483 aaKnown RBP12.97□□□□□ -0.33
VPS45-209ENST00000491789 FOXD4L1Q9NU39 408 aa12.96□□□□□ -0.33
VPS45-209ENST00000491789 ZNF219Q9P2Y4 722 aaPredicted RBP12.96□□□□□ -0.33
VPS45-209ENST00000491789 CUX2O14529 1486 aa12.96□□□□□ -0.34
VPS45-209ENST00000491789 WIZO95785 1651 aa12.86□□□□□ -0.35
VPS45-209ENST00000491789 LAMC3Q9Y6N6 1575 aa12.86□□□□□ -0.35
VPS45-209ENST00000491789 ABCB7O75027 752 aa12.86□□□□□ -0.35
VPS45-209ENST00000491789 KIF21AQ7Z4S6 1674 aa12.86□□□□□ -0.35
VPS45-209ENST00000491789 THOC2Q8NI27 1593 aaKnown RBP12.85□□□□□ -0.35
VPS45-209ENST00000491789 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
VPS45-209ENST00000491789 CADPSQ9ULU8 1353 aa12.76□□□□□ -0.37
VPS45-209ENST00000491789 PDS5BQ9NTI5 1447 aa12.75□□□□□ -0.37
VPS45-209ENST00000491789 ZBTB22O15209 634 aa12.71□□□□□ -0.37
VPS45-209ENST00000491789 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.38
VPS45-209ENST00000491789 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
VPS45-209ENST00000491789 SUPT5HO00267 1087 aaKnown RBP12.68□□□□□ -0.38
VPS45-209ENST00000491789 MRC2Q9UBG0 1479 aa12.65□□□□□ -0.38
VPS45-209ENST00000491789 WDR62O43379 1518 aa12.64□□□□□ -0.39
VPS45-209ENST00000491789 POLA2Q14181 598 aa12.64□□□□□ -0.39
VPS45-209ENST00000491789 TOP2AP11388 1531 aaKnown RBP12.62□□□□□ -0.39
VPS45-209ENST00000491789 CFTRP13569 1480 aa12.62□□□□□ -0.39
VPS45-209ENST00000491789 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
VPS45-209ENST00000491789 CEP164Q9UPV0 1460 aa12.59□□□□□ -0.39
VPS45-209ENST00000491789 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
VPS45-209ENST00000491789 SP7Q8TDD2 431 aaPredicted RBP12.56□□□□□ -0.4
VPS45-209ENST00000491789 PRDM2Q13029 1718 aa12.55□□□□□ -0.4
VPS45-209ENST00000491789 ATXN8OSP0DMR3 200 aa12.54□□□□□ -0.4
VPS45-209ENST00000491789 URB2Q14146 1524 aaKnown RBP12.53□□□□□ -0.4
VPS45-209ENST00000491789 CCDC88BA6NC98 1476 aa12.52□□□□□ -0.41
VPS45-209ENST00000491789 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
VPS45-209ENST00000491789 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
VPS45-209ENST00000491789 TRIM41Q8WV44 630 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms