RNA–Protein interactions for RNA: ENST00000491770.1

UBE2D4-211, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-211ENST00000491770 FGD5Q6ZNL6 1462 aa8.97□□□□□ -0.97
UBE2D4-211ENST00000491770 CAPN15O75808 1086 aa8.97□□□□□ -0.97
UBE2D4-211ENST00000491770 FBLN2P98095 1184 aa8.97□□□□□ -0.97
UBE2D4-211ENST00000491770 OSCARQ8IYS5 282 aa8.97□□□□□ -0.97
UBE2D4-211ENST00000491770 PBRM1Q86U86 1689 aa8.97□□□□□ -0.97
UBE2D4-211ENST00000491770 TARBP1Q13395 1621 aaKnown RBP8.96□□□□□ -0.98
UBE2D4-211ENST00000491770 FKBP8Q14318 412 aa8.95□□□□□ -0.98
UBE2D4-211ENST00000491770 SOGA1O94964 1423 aa8.94□□□□□ -0.98
UBE2D4-211ENST00000491770 POLA2Q14181 598 aa8.93□□□□□ -0.98
UBE2D4-211ENST00000491770 SYNJ1O43426 1573 aa8.93□□□□□ -0.98
UBE2D4-211ENST00000491770 CUX1P39880 1505 aa8.92□□□□□ -0.98
UBE2D4-211ENST00000491770 SNAPC4Q5SXM2 1469 aa8.92□□□□□ -0.98
UBE2D4-211ENST00000491770 MKRN4PQ13434 485 aaPredicted RBP8.92□□□□□ -0.98
UBE2D4-211ENST00000491770 RIMBP3CA6NJZ7 1639 aa8.91□□□□□ -0.98
UBE2D4-211ENST00000491770 RIMBP3BA6NNM3 1639 aa8.91□□□□□ -0.98
UBE2D4-211ENST00000491770 RIMBP3Q9UFD9 1639 aa8.91□□□□□ -0.98
UBE2D4-211ENST00000491770 AQRO60306 1485 aaKnown RBP eCLIP8.91□□□□□ -0.98
UBE2D4-211ENST00000491770 RAD54L2Q9Y4B4 1467 aa8.91□□□□□ -0.98
UBE2D4-211ENST00000491770 MAGI1Q96QZ7 1491 aaPredicted RBP8.9□□□□□ -0.98
UBE2D4-211ENST00000491770 GRIN2BQ13224 1484 aa8.89□□□□□ -0.99
UBE2D4-211ENST00000491770 TDRD9Q8NDG6 1382 aaKnown RBP8.88□□□□□ -0.99
UBE2D4-211ENST00000491770 BIVM-ERCC5R4GMW8 1640 aa8.88□□□□□ -0.99
UBE2D4-211ENST00000491770 ARHGEF11O15085 1522 aa8.88□□□□□ -0.99
UBE2D4-211ENST00000491770 CHMP7Q8WUX9 453 aaPredicted RBP8.87□□□□□ -0.99
UBE2D4-211ENST00000491770 WRNQ14191 1432 aaPredicted RBP eCLIP8.87□□□□□ -0.99
UBE2D4-211ENST00000491770 TOP2BQ02880 1626 aa8.87□□□□□ -0.99
UBE2D4-211ENST00000491770 GAPVD1Q14C86 1478 aa8.86□□□□□ -0.99
UBE2D4-211ENST00000491770 ABCA5Q8WWZ7 1642 aa8.86□□□□□ -0.99
UBE2D4-211ENST00000491770 SYNJ2O15056 1496 aa8.85□□□□□ -0.99
UBE2D4-211ENST00000491770 ABCB7O75027 752 aa8.85□□□□□ -0.99
UBE2D4-211ENST00000491770 ABCA10Q8WWZ4 1543 aa8.84□□□□□ -0.99
UBE2D4-211ENST00000491770 ADAMTS12P58397 1594 aa8.83□□□□□ -1
UBE2D4-211ENST00000491770 DSG3P32926 999 aa8.83□□□□□ -1
UBE2D4-211ENST00000491770 CLASP1Q7Z460 1538 aa8.79□□□□□ -1
UBE2D4-211ENST00000491770 GRIN2AQ12879 1464 aa8.77□□□□□ -1
UBE2D4-211ENST00000491770 ERICH3Q5RHP9 1530 aa8.77□□□□□ -1.01
UBE2D4-211ENST00000491770 ARAP1Q96P48 1450 aa8.77□□□□□ -1.01
UBE2D4-211ENST00000491770 CUL7Q14999 1698 aa8.76□□□□□ -1.01
UBE2D4-211ENST00000491770 CACNB1Q02641 598 aaPredicted RBP8.76□□□□□ -1.01
UBE2D4-211ENST00000491770 CYB5RLQ6IPT4 315 aa8.76□□□□□ -1.01
UBE2D4-211ENST00000491770 FHAD1B1AJZ9 1412 aa8.75□□□□□ -1.01
UBE2D4-211ENST00000491770 SPDYE4A6NLX3 237 aa8.75□□□□□ -1.01
UBE2D4-211ENST00000491770 ZBTB12Q9Y330 459 aaPredicted RBP8.74□□□□□ -1.01
UBE2D4-211ENST00000491770 CEP170Q5SW79 1584 aa8.73□□□□□ -1.01
UBE2D4-211ENST00000491770 KIF27Q86VH2 1401 aa8.72□□□□□ -1.01
UBE2D4-211ENST00000491770 PROM2Q8N271 834 aa8.71□□□□□ -1.02
UBE2D4-211ENST00000491770 RUSC2Q8N2Y8 1516 aa8.7□□□□□ -1.02
UBE2D4-211ENST00000491770 NUP160Q12769 1436 aa8.67□□□□□ -1.02
UBE2D4-211ENST00000491770 SHROOM2Q13796 1616 aa8.66□□□□□ -1.02
UBE2D4-211ENST00000491770 PRG4Q92954 1404 aaPredicted RBP8.63□□□□□ -1.03
UBE2D4-211ENST00000491770 IQGAP2Q13576 1575 aa8.62□□□□□ -1.03
UBE2D4-211ENST00000491770 ERCC6L2Q5T890 1561 aa8.62□□□□□ -1.03
UBE2D4-211ENST00000491770 NPM1P06748 294 aaKnown RBP eCLIP8.62□□□□□ -1.03
UBE2D4-211ENST00000491770 CTTNBP2Q8WZ74 1663 aa8.62□□□□□ -1.03
UBE2D4-211ENST00000491770 TTBK1Q5TCY1 1321 aaPredicted RBP8.61□□□□□ -1.03
UBE2D4-211ENST00000491770 CARMIL2Q6F5E8 1435 aa8.61□□□□□ -1.03
UBE2D4-211ENST00000491770 KIAA0586Q9BVV6 1533 aa8.59□□□□□ -1.03
UBE2D4-211ENST00000491770 FAM9AQ8IZU1 332 aaPredicted RBP8.58□□□□□ -1.04
UBE2D4-211ENST00000491770 CARMIL1Q5VZK9 1371 aa8.58□□□□□ -1.04
UBE2D4-211ENST00000491770 JPH4Q96JJ6 628 aa8.56□□□□□ -1.04
UBE2D4-211ENST00000491770 SSUH2Q9Y2M2 353 aa8.56□□□□□ -1.04
UBE2D4-211ENST00000491770 RAPGEF2Q9Y4G8 1499 aa8.56□□□□□ -1.04
UBE2D4-211ENST00000491770 SPDYE2BA6NHP3 402 aa8.55□□□□□ -1.04
UBE2D4-211ENST00000491770 SPDYE6P0CI01 402 aa8.55□□□□□ -1.04
UBE2D4-211ENST00000491770 SPDYE2Q495Y8 402 aa8.55□□□□□ -1.04
UBE2D4-211ENST00000491770 ZNF692Q9BU19 519 aaPredicted RBP8.55□□□□□ -1.04
UBE2D4-211ENST00000491770 RTN4Q9NQC3 1192 aaKnown RBP8.55□□□□□ -1.04
UBE2D4-211ENST00000491770 FBXO3Q9UK99 471 aa8.55□□□□□ -1.04
UBE2D4-211ENST00000491770 ADCY10Q96PN6 1610 aa8.54□□□□□ -1.04
UBE2D4-211ENST00000491770 TSPOAP1O95153 1857 aa8.53□□□□□ -1.04
UBE2D4-211ENST00000491770 KIF13AQ9H1H9 1805 aa8.53□□□□□ -1.04
UBE2D4-211ENST00000491770 GOLGA3Q08378 1498 aa8.52□□□□□ -1.05
UBE2D4-211ENST00000491770 IGF1RP08069 1367 aa8.52□□□□□ -1.05
UBE2D4-211ENST00000491770 KIAA0556O60303 1618 aa8.52□□□□□ -1.05
UBE2D4-211ENST00000491770 TNIKQ9UKE5 1360 aa8.51□□□□□ -1.05
UBE2D4-211ENST00000491770 MAPKBP1O60336 1514 aa8.51□□□□□ -1.05
UBE2D4-211ENST00000491770 AMER1Q5JTC6 1135 aaPredicted RBP8.51□□□□□ -1.05
UBE2D4-211ENST00000491770 PTPRGP23470 1445 aa8.51□□□□□ -1.05
UBE2D4-211ENST00000491770 DIP2BQ9P265 1576 aa8.5□□□□□ -1.05
UBE2D4-211ENST00000491770 KDM6BO15054 1643 aa8.5□□□□□ -1.05
UBE2D4-211ENST00000491770 ABCC2Q92887 1545 aa8.48□□□□□ -1.05
UBE2D4-211ENST00000491770 EEA1Q15075 1411 aa8.47□□□□□ -1.05
UBE2D4-211ENST00000491770 FAM69CQ0P6D2 419 aa8.47□□□□□ -1.05
UBE2D4-211ENST00000491770 UGGT2Q9NYU1 1516 aa8.47□□□□□ -1.05
UBE2D4-211ENST00000491770 VASPP50552 380 aaPredicted RBP8.46□□□□□ -1.06
UBE2D4-211ENST00000491770 ZCCHC11Q5TAX3 1644 aaKnown RBP8.46□□□□□ -1.06
UBE2D4-211ENST00000491770 ABCC10Q5T3U5 1492 aa8.45□□□□□ -1.06
UBE2D4-211ENST00000491770 UACAQ9BZF9 1416 aa8.45□□□□□ -1.06
UBE2D4-211ENST00000491770 PLB1Q6P1J6 1458 aa8.45□□□□□ -1.06
UBE2D4-211ENST00000491770 TEX14Q8IWB6 1497 aa8.43□□□□□ -1.06
UBE2D4-211ENST00000491770 DISP1Q96F81 1524 aa8.43□□□□□ -1.06
UBE2D4-211ENST00000491770 RANGAP1P46060 587 aaPredicted RBP8.42□□□□□ -1.06
UBE2D4-211ENST00000491770 ASXL2Q76L83 1435 aa8.42□□□□□ -1.06
UBE2D4-211ENST00000491770 UHRF1BP1LA0JNW5 1464 aa8.41□□□□□ -1.06
UBE2D4-211ENST00000491770 IFNLR1Q8IU57 520 aaPredicted RBP8.41□□□□□ -1.06
UBE2D4-211ENST00000491770 KIF21BO75037 1637 aa8.4□□□□□ -1.06
UBE2D4-211ENST00000491770 PRXQ9BXM0 1461 aa8.39□□□□□ -1.07
UBE2D4-211ENST00000491770 WDR7Q9Y4E6 1490 aa8.39□□□□□ -1.07
UBE2D4-211ENST00000491770 CFAP43Q8NDM7 1665 aa8.39□□□□□ -1.07
UBE2D4-211ENST00000491770 RAPGEF6Q8TEU7 1601 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms