RNA–Protein interactions for RNA: ENST00000489740.1

LTBP1-211, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 3

Gene LTBP1, Length 505 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-211ENST00000489740 IFT140Q96RY7 1462 aa12.21□□□□□ -0.45
LTBP1-211ENST00000489740 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.46
LTBP1-211ENST00000489740 PITPNM1O00562 1244 aa12.2□□□□□ -0.46
LTBP1-211ENST00000489740 TOP2AP11388 1531 aaKnown RBP12.15□□□□□ -0.46
LTBP1-211ENST00000489740 PRDM2Q13029 1718 aa12.14□□□□□ -0.47
LTBP1-211ENST00000489740 ARAP1Q96P48 1450 aa12.14□□□□□ -0.47
LTBP1-211ENST00000489740 RSF1Q96T23 1441 aaPredicted RBP12.12□□□□□ -0.47
LTBP1-211ENST00000489740 EIF4G3O43432 1585 aaKnown RBP12.12□□□□□ -0.47
LTBP1-211ENST00000489740 TOPBP1Q92547 1522 aa12.11□□□□□ -0.47
LTBP1-211ENST00000489740 ABCC8Q09428 1581 aa12.1□□□□□ -0.47
LTBP1-211ENST00000489740 CHD1O14646 1710 aa12.09□□□□□ -0.47
LTBP1-211ENST00000489740 EVX2Q03828 476 aa12.08□□□□□ -0.48
LTBP1-211ENST00000489740 FBLN2P98095 1184 aa12.06□□□□□ -0.48
LTBP1-211ENST00000489740 AQRO60306 1485 aaKnown RBP eCLIP12.06□□□□□ -0.48
LTBP1-211ENST00000489740 DNMBPQ6XZF7 1577 aa12.04□□□□□ -0.48
LTBP1-211ENST00000489740 TARBP1Q13395 1621 aaKnown RBP12.03□□□□□ -0.48
LTBP1-211ENST00000489740 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.49
LTBP1-211ENST00000489740 LHX8Q68G74 356 aa11.99□□□□□ -0.49
LTBP1-211ENST00000489740 CLASP1Q7Z460 1538 aa11.96□□□□□ -0.49
LTBP1-211ENST00000489740 POLA1P09884 1462 aaPredicted RBP11.96□□□□□ -0.49
LTBP1-211ENST00000489740 ATF5Q9Y2D1 282 aaPredicted RBP11.94□□□□□ -0.5
LTBP1-211ENST00000489740 TDRD9Q8NDG6 1382 aaKnown RBP11.93□□□□□ -0.5
LTBP1-211ENST00000489740 SYNJ1O43426 1573 aa11.93□□□□□ -0.5
LTBP1-211ENST00000489740 CHMP7Q8WUX9 453 aaPredicted RBP11.93□□□□□ -0.5
LTBP1-211ENST00000489740 SOGA1O94964 1423 aa11.92□□□□□ -0.5
LTBP1-211ENST00000489740 SNAPC4Q5SXM2 1469 aa11.91□□□□□ -0.5
LTBP1-211ENST00000489740 RAD54L2Q9Y4B4 1467 aa11.91□□□□□ -0.5
LTBP1-211ENST00000489740 WDR97A6NE52 1622 aa11.91□□□□□ -0.5
LTBP1-211ENST00000489740 MAGI1Q96QZ7 1491 aaPredicted RBP11.9□□□□□ -0.5
LTBP1-211ENST00000489740 C19orf67A6NJJ6 358 aa11.9□□□□□ -0.5
LTBP1-211ENST00000489740 PRKAR2AP13861 404 aaKnown RBP11.9□□□□□ -0.5
LTBP1-211ENST00000489740 GABBR2O75899 941 aa11.88□□□□□ -0.51
LTBP1-211ENST00000489740 SPDYE2BA6NHP3 402 aa11.87□□□□□ -0.51
LTBP1-211ENST00000489740 SPDYE6P0CI01 402 aa11.87□□□□□ -0.51
LTBP1-211ENST00000489740 SPDYE2Q495Y8 402 aa11.87□□□□□ -0.51
LTBP1-211ENST00000489740 GAPVD1Q14C86 1478 aa11.87□□□□□ -0.51
LTBP1-211ENST00000489740 SYNJ2O15056 1496 aa11.86□□□□□ -0.51
LTBP1-211ENST00000489740 GRIN2BQ13224 1484 aa11.86□□□□□ -0.51
LTBP1-211ENST00000489740 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
LTBP1-211ENST00000489740 FOXD4L1Q9NU39 408 aa11.83□□□□□ -0.52
LTBP1-211ENST00000489740 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
LTBP1-211ENST00000489740 PLSCR2Q9NRY7 297 aa11.77□□□□□ -0.53
LTBP1-211ENST00000489740 CLEC11AQ9Y240 323 aa11.77□□□□□ -0.53
LTBP1-211ENST00000489740 CUX1P39880 1505 aa11.76□□□□□ -0.53
LTBP1-211ENST00000489740 PBRM1Q86U86 1689 aa11.75□□□□□ -0.53
LTBP1-211ENST00000489740 ERCC6L2Q5T890 1561 aa11.72□□□□□ -0.53
LTBP1-211ENST00000489740 GRIN2AQ12879 1464 aa11.7□□□□□ -0.54
LTBP1-211ENST00000489740 KIF13AQ9H1H9 1805 aa11.7□□□□□ -0.54
LTBP1-211ENST00000489740 ABCA5Q8WWZ7 1642 aa11.69□□□□□ -0.54
LTBP1-211ENST00000489740 CEP170Q5SW79 1584 aa11.69□□□□□ -0.54
LTBP1-211ENST00000489740 ABCA10Q8WWZ4 1543 aa11.69□□□□□ -0.54
LTBP1-211ENST00000489740 NUP160Q12769 1436 aa11.68□□□□□ -0.54
LTBP1-211ENST00000489740 CLCN6P51797 869 aa11.66□□□□□ -0.54
LTBP1-211ENST00000489740 SHROOM2Q13796 1616 aa11.66□□□□□ -0.54
LTBP1-211ENST00000489740 ILDR1Q86SU0 546 aaPredicted RBP11.65□□□□□ -0.54
LTBP1-211ENST00000489740 FAM69CQ0P6D2 419 aa11.63□□□□□ -0.55
LTBP1-211ENST00000489740 ABCC10Q5T3U5 1492 aa11.62□□□□□ -0.55
LTBP1-211ENST00000489740 ADAMTS12P58397 1594 aa11.62□□□□□ -0.55
LTBP1-211ENST00000489740 KDM4FA0A1W2PPD8 638 aa11.61□□□□□ -0.55
LTBP1-211ENST00000489740 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
LTBP1-211ENST00000489740 FHAD1B1AJZ9 1412 aa11.6□□□□□ -0.55
LTBP1-211ENST00000489740 NPM1P06748 294 aaKnown RBP eCLIP11.59□□□□□ -0.55
LTBP1-211ENST00000489740 WRNQ14191 1432 aaPredicted RBP eCLIP11.59□□□□□ -0.55
LTBP1-211ENST00000489740 PRG4Q92954 1404 aaPredicted RBP11.59□□□□□ -0.55
LTBP1-211ENST00000489740 ZNF692Q9BU19 519 aaPredicted RBP11.58□□□□□ -0.56
LTBP1-211ENST00000489740 SLC4A1APQ9BWU0 796 aaKnown RBP11.58□□□□□ -0.56
LTBP1-211ENST00000489740 SSUH2Q9Y2M2 353 aa11.58□□□□□ -0.56
LTBP1-211ENST00000489740 MAPKBP1O60336 1514 aa11.57□□□□□ -0.56
LTBP1-211ENST00000489740 JPH4Q96JJ6 628 aa11.57□□□□□ -0.56
LTBP1-211ENST00000489740 KDM6BO15054 1643 aa11.56□□□□□ -0.56
LTBP1-211ENST00000489740 DIP2BQ9P265 1576 aa11.55□□□□□ -0.56
LTBP1-211ENST00000489740 ERICH3Q5RHP9 1530 aa11.55□□□□□ -0.56
LTBP1-211ENST00000489740 POTEIP0CG38 1075 aa11.54□□□□□ -0.56
LTBP1-211ENST00000489740 CHADLQ6NUI6 762 aa11.54□□□□□ -0.56
LTBP1-211ENST00000489740 PRR29P0C7W0 189 aa11.53□□□□□ -0.56
LTBP1-211ENST00000489740 CD44P16070 742 aaKnown RBP11.5□□□□□ -0.57
LTBP1-211ENST00000489740 ADCY10Q96PN6 1610 aa11.49□□□□□ -0.57
LTBP1-211ENST00000489740 DCBLD2Q96PD2 775 aa11.48□□□□□ -0.57
LTBP1-211ENST00000489740 TOP2BQ02880 1626 aa11.48□□□□□ -0.57
LTBP1-211ENST00000489740 BIVM-ERCC5R4GMW8 1640 aa11.48□□□□□ -0.57
LTBP1-211ENST00000489740 TSPOAP1O95153 1857 aa11.47□□□□□ -0.57
LTBP1-211ENST00000489740 RUSC2Q8N2Y8 1516 aa11.47□□□□□ -0.57
LTBP1-211ENST00000489740 ADGRL1O94910 1474 aa11.43□□□□□ -0.58
LTBP1-211ENST00000489740 KIAA0586Q9BVV6 1533 aa11.4□□□□□ -0.58
LTBP1-211ENST00000489740 FARP1Q9Y4F1 1045 aaPredicted RBP11.4□□□□□ -0.58
LTBP1-211ENST00000489740 MKRN4PQ13434 485 aaPredicted RBP11.39□□□□□ -0.59
LTBP1-211ENST00000489740 HECW2Q9P2P5 1572 aa11.39□□□□□ -0.59
LTBP1-211ENST00000489740 GLI2P10070 1586 aa11.37□□□□□ -0.59
LTBP1-211ENST00000489740 PTPRGP23470 1445 aa11.37□□□□□ -0.59
LTBP1-211ENST00000489740 PLB1Q6P1J6 1458 aa11.37□□□□□ -0.59
LTBP1-211ENST00000489740 PPRC1Q5VV67 1664 aaKnown RBP11.36□□□□□ -0.59
LTBP1-211ENST00000489740 ASXL2Q76L83 1435 aa11.35□□□□□ -0.59
LTBP1-211ENST00000489740 ABCC2Q92887 1545 aa11.35□□□□□ -0.59
LTBP1-211ENST00000489740 COL17A1Q9UMD9 1497 aaPredicted RBP11.32□□□□□ -0.6
LTBP1-211ENST00000489740 PCDH10Q9P2E7 1040 aa11.32□□□□□ -0.6
LTBP1-211ENST00000489740 IGF1RP08069 1367 aa11.31□□□□□ -0.6
LTBP1-211ENST00000489740 TNIKQ9UKE5 1360 aa11.31□□□□□ -0.6
LTBP1-211ENST00000489740 POTEMA6NI47 508 aa11.31□□□□□ -0.6
LTBP1-211ENST00000489740 ZNF579Q8NAF0 562 aaKnown RBP11.31□□□□□ -0.6
LTBP1-211ENST00000489740 FBXO41Q8TF61 875 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms