RNA–Protein interactions for RNA: ENST00000489740.1

LTBP1-211, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 3

Gene LTBP1, Length 505 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-211ENST00000489740 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
LTBP1-211ENST00000489740 CHIC1Q5VXU3 224 aa21.21■□□□□ 0.99
LTBP1-211ENST00000489740 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
LTBP1-211ENST00000489740 PHF23Q9BUL5 403 aaPredicted RBP19.04■□□□□ 0.64
LTBP1-211ENST00000489740 FOXD1Q16676 465 aa18.11■□□□□ 0.49
LTBP1-211ENST00000489740 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
LTBP1-211ENST00000489740 MSH5O43196 834 aa17.37■□□□□ 0.37
LTBP1-211ENST00000489740 PIAS4Q8N2W9 510 aaPredicted RBP16.81■□□□□ 0.28
LTBP1-211ENST00000489740 PLPPR3Q6T4P5 718 aa16.39■□□□□ 0.21
LTBP1-211ENST00000489740 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
LTBP1-211ENST00000489740 ADRA2BP18089 450 aa16.27■□□□□ 0.2
LTBP1-211ENST00000489740 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
LTBP1-211ENST00000489740 DMRT2Q9Y5R5 561 aa15.3■□□□□ 0.04
LTBP1-211ENST00000489740 CACNB1Q02641 598 aaPredicted RBP15.25■□□□□ 0.03
LTBP1-211ENST00000489740 SCAF1Q9H7N4 1312 aaKnown RBP15.13■□□□□ 0.01
LTBP1-211ENST00000489740 MAPK8IP2Q13387 824 aaPredicted RBP15.12■□□□□ 0.01
LTBP1-211ENST00000489740 ABCC9O60706 1549 aa15.07■□□□□ 0
LTBP1-211ENST00000489740 CCDC180Q9P1Z9 1646 aa14.74□□□□□ -0.05
LTBP1-211ENST00000489740 RNF39Q9H2S5 420 aa14.68□□□□□ -0.06
LTBP1-211ENST00000489740 DCAF8L1A6NGE4 600 aa14.67□□□□□ -0.06
LTBP1-211ENST00000489740 C1QBPQ07021 282 aaKnown RBP14.5□□□□□ -0.09
LTBP1-211ENST00000489740 HOXD11P31277 338 aaPredicted RBP14.48□□□□□ -0.09
LTBP1-211ENST00000489740 DNAJC5BQ9UF47 199 aa14.48□□□□□ -0.09
LTBP1-211ENST00000489740 RB1CC1Q8TDY2 1594 aa14.22□□□□□ -0.13
LTBP1-211ENST00000489740 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
LTBP1-211ENST00000489740 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.13
LTBP1-211ENST00000489740 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
LTBP1-211ENST00000489740 NACADO15069 1562 aa14.04□□□□□ -0.16
LTBP1-211ENST00000489740 POTEHQ6S545 545 aa13.98□□□□□ -0.17
LTBP1-211ENST00000489740 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
LTBP1-211ENST00000489740 DCAF8L2P0C7V8 631 aa13.86□□□□□ -0.19
LTBP1-211ENST00000489740 UNC13AQ9UPW8 1703 aa13.85□□□□□ -0.19
LTBP1-211ENST00000489740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.2
LTBP1-211ENST00000489740 BICRAQ9NZM4 1560 aa13.79□□□□□ -0.2
LTBP1-211ENST00000489740 MYO15BQ96JP2 1530 aa13.74□□□□□ -0.21
LTBP1-211ENST00000489740 CECR2Q9BXF3 1484 aa13.64□□□□□ -0.23
LTBP1-211ENST00000489740 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
LTBP1-211ENST00000489740 DNAJC5Q9H3Z4 198 aa13.61□□□□□ -0.23
LTBP1-211ENST00000489740 CC2D2AQ9P2K1 1620 aa13.61□□□□□ -0.23
LTBP1-211ENST00000489740 NCBP3Q53F19 620 aaKnown RBP13.58□□□□□ -0.24
LTBP1-211ENST00000489740 DSG3P32926 999 aa13.49□□□□□ -0.25
LTBP1-211ENST00000489740 EIF4G1Q04637 1599 aaKnown RBP13.49□□□□□ -0.25
LTBP1-211ENST00000489740 CAPN15O75808 1086 aa13.43□□□□□ -0.26
LTBP1-211ENST00000489740 DCAF1Q9Y4B6 1507 aa13.41□□□□□ -0.26
LTBP1-211ENST00000489740 U3KPZ7 1027 aaPredicted RBP13.37□□□□□ -0.27
LTBP1-211ENST00000489740 SCRIBQ14160 1630 aa13.37□□□□□ -0.27
LTBP1-211ENST00000489740 ZCCHC6Q5VYS8 1495 aaKnown RBP13.36□□□□□ -0.27
LTBP1-211ENST00000489740 SPINK5Q9NQ38 1064 aaPredicted RBP13.33□□□□□ -0.28
LTBP1-211ENST00000489740 NPM3O75607 178 aaKnown RBP13.23□□□□□ -0.29
LTBP1-211ENST00000489740 CUX2O14529 1486 aa13.18□□□□□ -0.3
LTBP1-211ENST00000489740 APLP2Q06481 763 aa13.15□□□□□ -0.3
LTBP1-211ENST00000489740 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
LTBP1-211ENST00000489740 ERCC6Q03468 1493 aa13.06□□□□□ -0.32
LTBP1-211ENST00000489740 RBM42Q9BTD8 480 aaKnown RBP13.03□□□□□ -0.32
LTBP1-211ENST00000489740 TRHP20396 242 aaPredicted RBP13.02□□□□□ -0.33
LTBP1-211ENST00000489740 ABCB7O75027 752 aa12.98□□□□□ -0.33
LTBP1-211ENST00000489740 NCAPD3P42695 1498 aa12.97□□□□□ -0.33
LTBP1-211ENST00000489740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
LTBP1-211ENST00000489740 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
LTBP1-211ENST00000489740 CHRDL2Q6WN34 429 aa12.92□□□□□ -0.34
LTBP1-211ENST00000489740 ATAD2BQ9ULI0 1458 aa12.85□□□□□ -0.35
LTBP1-211ENST00000489740 NESP48681 1621 aa12.84□□□□□ -0.35
LTBP1-211ENST00000489740 TRIM41Q8WV44 630 aa12.82□□□□□ -0.36
LTBP1-211ENST00000489740 HMGXB3Q12766 1538 aa12.82□□□□□ -0.36
LTBP1-211ENST00000489740 SP7Q8TDD2 431 aaPredicted RBP12.81□□□□□ -0.36
LTBP1-211ENST00000489740 SMARCA2P51531 1590 aa12.81□□□□□ -0.36
LTBP1-211ENST00000489740 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
LTBP1-211ENST00000489740 THOC2Q8NI27 1593 aaKnown RBP12.78□□□□□ -0.36
LTBP1-211ENST00000489740 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
LTBP1-211ENST00000489740 SMARCA4P51532 1647 aa12.73□□□□□ -0.37
LTBP1-211ENST00000489740 LAMC3Q9Y6N6 1575 aa12.72□□□□□ -0.37
LTBP1-211ENST00000489740 BAZ1BQ9UIG0 1483 aaKnown RBP12.71□□□□□ -0.38
LTBP1-211ENST00000489740 PDS5BQ9NTI5 1447 aa12.68□□□□□ -0.38
LTBP1-211ENST00000489740 KIF21AQ7Z4S6 1674 aa12.65□□□□□ -0.38
LTBP1-211ENST00000489740 PEG3Q9GZU2 1588 aa12.64□□□□□ -0.39
LTBP1-211ENST00000489740 BAZ1AQ9NRL2 1556 aaPredicted RBP12.63□□□□□ -0.39
LTBP1-211ENST00000489740 MRC2Q9UBG0 1479 aa12.56□□□□□ -0.4
LTBP1-211ENST00000489740 CADPSQ9ULU8 1353 aa12.55□□□□□ -0.4
LTBP1-211ENST00000489740 WDR62O43379 1518 aa12.54□□□□□ -0.4
LTBP1-211ENST00000489740 POLA2Q14181 598 aa12.54□□□□□ -0.4
LTBP1-211ENST00000489740 OSCARQ8IYS5 282 aa12.53□□□□□ -0.4
LTBP1-211ENST00000489740 AKT1S1Q96B36 256 aa12.53□□□□□ -0.4
LTBP1-211ENST00000489740 MROH2BQ7Z745 1585 aa12.49□□□□□ -0.41
LTBP1-211ENST00000489740 CEP164Q9UPV0 1460 aa12.44□□□□□ -0.42
LTBP1-211ENST00000489740 HAX1O00165 279 aa12.42□□□□□ -0.42
LTBP1-211ENST00000489740 PIP4P2Q8N4L2 257 aa12.42□□□□□ -0.42
LTBP1-211ENST00000489740 FANCD2Q9BXW9 1451 aa12.39□□□□□ -0.43
LTBP1-211ENST00000489740 ZBTB12Q9Y330 459 aaPredicted RBP12.38□□□□□ -0.43
LTBP1-211ENST00000489740 RIMBP3CA6NJZ7 1639 aa12.36□□□□□ -0.43
LTBP1-211ENST00000489740 RIMBP3BA6NNM3 1639 aa12.36□□□□□ -0.43
LTBP1-211ENST00000489740 RIMBP3Q9UFD9 1639 aa12.36□□□□□ -0.43
LTBP1-211ENST00000489740 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
LTBP1-211ENST00000489740 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
LTBP1-211ENST00000489740 KCNA4P22459 653 aa12.34□□□□□ -0.43
LTBP1-211ENST00000489740 CFTRP13569 1480 aa12.33□□□□□ -0.44
LTBP1-211ENST00000489740 WIZO95785 1651 aa12.31□□□□□ -0.44
LTBP1-211ENST00000489740 URB2Q14146 1524 aaKnown RBP12.3□□□□□ -0.44
LTBP1-211ENST00000489740 ARHGEF11O15085 1522 aa12.29□□□□□ -0.44
LTBP1-211ENST00000489740 FXR2P51116 673 aaKnown RBP eCLIP12.27□□□□□ -0.45
LTBP1-211ENST00000489740 CYB5RLQ6IPT4 315 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms