RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 MSH5O43196 834 aa18.57■□□□□ 0.56
ABCA2-219ENST00000488535 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
ABCA2-219ENST00000488535 NBR1Q14596 966 aa18.56■□□□□ 0.56
ABCA2-219ENST00000488535 PRKCSHP14314 528 aaPredicted RBP18.53■□□□□ 0.56
ABCA2-219ENST00000488535 IGF1RP08069 1367 aa18.53■□□□□ 0.56
ABCA2-219ENST00000488535 CARMIL1Q5VZK9 1371 aa18.52■□□□□ 0.56
ABCA2-219ENST00000488535 KIF21BO75037 1637 aa18.52■□□□□ 0.55
ABCA2-219ENST00000488535 BIVM-ERCC5R4GMW8 1640 aa18.52■□□□□ 0.55
ABCA2-219ENST00000488535 TDRD9Q8NDG6 1382 aaKnown RBP18.51■□□□□ 0.55
ABCA2-219ENST00000488535 CDK11AQ9UQ88 783 aaPredicted RBP18.49■□□□□ 0.55
ABCA2-219ENST00000488535 VPS8Q8N3P4 1428 aa18.48■□□□□ 0.55
ABCA2-219ENST00000488535 PRXQ9BXM0 1461 aa18.48■□□□□ 0.55
ABCA2-219ENST00000488535 KANK4Q5T7N3 995 aaPredicted RBP18.47■□□□□ 0.55
ABCA2-219ENST00000488535 CNGB1Q14028 1251 aaPredicted RBP18.45■□□□□ 0.54
ABCA2-219ENST00000488535 DHX57Q6P158 1386 aaKnown RBP18.45■□□□□ 0.54
ABCA2-219ENST00000488535 DEKP35659 375 aaKnown RBP18.42■□□□□ 0.54
ABCA2-219ENST00000488535 SIN3AQ96ST3 1273 aa18.41■□□□□ 0.54
ABCA2-219ENST00000488535 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
ABCA2-219ENST00000488535 ANP32CO43423 234 aa18.41■□□□□ 0.54
ABCA2-219ENST00000488535 TOPBP1Q92547 1522 aa18.4■□□□□ 0.54
ABCA2-219ENST00000488535 HNRNPUQ00839 825 aaKnown RBP eCLIP18.39■□□□□ 0.54
ABCA2-219ENST00000488535 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.53
ABCA2-219ENST00000488535 RTN4Q9NQC3 1192 aaKnown RBP18.38■□□□□ 0.53
ABCA2-219ENST00000488535 ARID3CA6NKF2 412 aa18.36■□□□□ 0.53
ABCA2-219ENST00000488535 ARAP1Q96P48 1450 aa18.36■□□□□ 0.53
ABCA2-219ENST00000488535 ANO8Q9HCE9 1232 aaPredicted RBP18.35■□□□□ 0.53
ABCA2-219ENST00000488535 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.52
ABCA2-219ENST00000488535 URB2Q14146 1524 aaKnown RBP18.32■□□□□ 0.52
ABCA2-219ENST00000488535 ERICH3Q5RHP9 1530 aa18.32■□□□□ 0.52
ABCA2-219ENST00000488535 CCDC136Q96JN2 1154 aa18.32■□□□□ 0.52
ABCA2-219ENST00000488535 FBLN2P98095 1184 aa18.32■□□□□ 0.52
ABCA2-219ENST00000488535 FAM50AQ14320 339 aaKnown RBP18.31■□□□□ 0.52
ABCA2-219ENST00000488535 DNMBPQ6XZF7 1577 aa18.29■□□□□ 0.52
ABCA2-219ENST00000488535 ARHGAP35Q9NRY4 1499 aa18.28■□□□□ 0.52
ABCA2-219ENST00000488535 B4GALNT3Q6L9W6 998 aa18.28■□□□□ 0.52
ABCA2-219ENST00000488535 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
ABCA2-219ENST00000488535 FHOD3Q2V2M9 1422 aa18.24■□□□□ 0.51
ABCA2-219ENST00000488535 PRDM2Q13029 1718 aa18.23■□□□□ 0.51
ABCA2-219ENST00000488535 AQRO60306 1485 aaKnown RBP eCLIP18.22■□□□□ 0.513e-9■■■■■ 44.1
ABCA2-219ENST00000488535 ERCC6Q03468 1493 aa18.21■□□□□ 0.51
ABCA2-219ENST00000488535 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.21■□□□□ 0.51
ABCA2-219ENST00000488535 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
ABCA2-219ENST00000488535 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
ABCA2-219ENST00000488535 RTL5Q5HYW3 569 aaPredicted RBP18.18■□□□□ 0.5
ABCA2-219ENST00000488535 FAM9BQ8IZU0 186 aa18.17■□□□□ 0.5
ABCA2-219ENST00000488535 SALL2Q9Y467 1007 aaPredicted RBP18.16■□□□□ 0.5
ABCA2-219ENST00000488535 NPM2Q86SE8 214 aaKnown RBP18.14■□□□□ 0.49
ABCA2-219ENST00000488535 KIF21AQ7Z4S6 1674 aa18.14■□□□□ 0.49
ABCA2-219ENST00000488535 FANCIQ9NVI1 1328 aa18.14■□□□□ 0.49
ABCA2-219ENST00000488535 PAK3O75914 559 aaPredicted RBP18.13■□□□□ 0.49
ABCA2-219ENST00000488535 RAB3GAP2Q9H2M9 1393 aa18.11■□□□□ 0.49
ABCA2-219ENST00000488535 NOP58Q9Y2X3 529 aaKnown RBP18.11■□□□□ 0.49
ABCA2-219ENST00000488535 PPP1R15AO75807 674 aaPredicted RBP18.09■□□□□ 0.49
ABCA2-219ENST00000488535 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
ABCA2-219ENST00000488535 IL27Q8NEV9 243 aa18.07■□□□□ 0.48
ABCA2-219ENST00000488535 CCNB3Q8WWL7 1395 aa18.06■□□□□ 0.48
ABCA2-219ENST00000488535 POLR3GLQ9BT43 218 aa18.06■□□□□ 0.48
ABCA2-219ENST00000488535 MRC2Q9UBG0 1479 aa18.05■□□□□ 0.48
ABCA2-219ENST00000488535 FHAD1B1AJZ9 1412 aa18.05■□□□□ 0.48
ABCA2-219ENST00000488535 ZNF608Q9ULD9 1512 aaPredicted RBP18.05■□□□□ 0.48
ABCA2-219ENST00000488535 EIF5BO60841 1220 aaKnown RBP18.04■□□□□ 0.48
ABCA2-219ENST00000488535 MTUS2Q5JR59 1369 aa18.02■□□□□ 0.48
ABCA2-219ENST00000488535 CCER2I3L3R5 266 aa18.01■□□□□ 0.47
ABCA2-219ENST00000488535 PPP4R2Q9NY27 417 aa18.01■□□□□ 0.47
ABCA2-219ENST00000488535 LAS1LQ9Y4W2 734 aaKnown RBP18■□□□□ 0.47
ABCA2-219ENST00000488535 ANP32AP39687 249 aaKnown RBP18■□□□□ 0.47
ABCA2-219ENST00000488535 WDR97A6NE52 1622 aa17.99■□□□□ 0.47
ABCA2-219ENST00000488535 PHLDB1Q86UU1 1377 aa17.98■□□□□ 0.47
ABCA2-219ENST00000488535 ZBTB47Q9UFB7 747 aaPredicted RBP17.98■□□□□ 0.47
ABCA2-219ENST00000488535 MYT1LQ9UL68 1186 aa17.97■□□□□ 0.47
ABCA2-219ENST00000488535 TONSLQ96HA7 1378 aa17.96■□□□□ 0.47
ABCA2-219ENST00000488535 CCDC184Q52MB2 194 aa17.95■□□□□ 0.46
ABCA2-219ENST00000488535 CHIC2Q9UKJ5 165 aa17.94■□□□□ 0.46
ABCA2-219ENST00000488535 LRRC9Q6ZRR7 1453 aa17.93■□□□□ 0.46
ABCA2-219ENST00000488535 MRS2Q9HD23 443 aa17.93■□□□□ 0.46
ABCA2-219ENST00000488535 FMN1Q68DA7 1419 aa17.92■□□□□ 0.46
ABCA2-219ENST00000488535 PCF11O94913 1555 aaKnown RBP17.92■□□□□ 0.46
ABCA2-219ENST00000488535 CUL7Q14999 1698 aa17.91■□□□□ 0.46
ABCA2-219ENST00000488535 GRIN2BQ13224 1484 aa17.9■□□□□ 0.46
ABCA2-219ENST00000488535 TIAM1Q13009 1591 aa17.9■□□□□ 0.46
ABCA2-219ENST00000488535 ABCA5Q8WWZ7 1642 aa17.88■□□□□ 0.45
ABCA2-219ENST00000488535 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
ABCA2-219ENST00000488535 RRBP1Q9P2E9 1410 aaKnown RBP17.87■□□□□ 0.45
ABCA2-219ENST00000488535 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
ABCA2-219ENST00000488535 IFT140Q96RY7 1462 aa17.87■□□□□ 0.45
ABCA2-219ENST00000488535 CASKIN1Q8WXD9 1431 aa17.86■□□□□ 0.45
ABCA2-219ENST00000488535 SETD5Q9C0A6 1442 aa17.85■□□□□ 0.45
ABCA2-219ENST00000488535 NEFMP07197 916 aa17.84■□□□□ 0.45
ABCA2-219ENST00000488535 RRP7BPQ9NSQ0 103 aa17.84■□□□□ 0.45
ABCA2-219ENST00000488535 ZNF777Q9ULD5 760 aaPredicted RBP17.82■□□□□ 0.44
ABCA2-219ENST00000488535 EFCAB5A4FU69 1503 aa17.81■□□□□ 0.44
ABCA2-219ENST00000488535 FYCO1Q9BQS8 1478 aa17.8■□□□□ 0.44
ABCA2-219ENST00000488535 MAPKBP1O60336 1514 aa17.8■□□□□ 0.44
ABCA2-219ENST00000488535 IPO9Q96P70 1041 aaKnown RBP17.8■□□□□ 0.44
ABCA2-219ENST00000488535 JPH4Q96JJ6 628 aa17.78■□□□□ 0.44
ABCA2-219ENST00000488535 CTTNBP2Q8WZ74 1663 aa17.78■□□□□ 0.44
ABCA2-219ENST00000488535 HSPA5P11021 654 aaKnown RBP17.77■□□□□ 0.43
ABCA2-219ENST00000488535 WDR62O43379 1518 aa17.75■□□□□ 0.43
ABCA2-219ENST00000488535 IQGAP2Q13576 1575 aa17.73■□□□□ 0.43
ABCA2-219ENST00000488535 ZNF326Q5BKZ1 582 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms