RNA–Protein interactions for RNA: ENST00000487976.2

CCDC180-205, Transcript of coiled-coil domain containing 180, humanhuman

TSL 1 (best)

Gene CCDC180, Length 3,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-205ENST00000487976 ITGAEP38570 1179 aa15.29■□□□□ 0.04
CCDC180-205ENST00000487976 FANCIQ9NVI1 1328 aa15.29■□□□□ 0.04
CCDC180-205ENST00000487976 KIF27Q86VH2 1401 aa15.28■□□□□ 0.04
CCDC180-205ENST00000487976 DHX57Q6P158 1386 aaKnown RBP15.25■□□□□ 0.03
CCDC180-205ENST00000487976 DEKP35659 375 aaKnown RBP15.24■□□□□ 0.03
CCDC180-205ENST00000487976 CADPSQ9ULU8 1353 aa15.22■□□□□ 0.03
CCDC180-205ENST00000487976 ANO8Q9HCE9 1232 aaPredicted RBP15.18■□□□□ 0.02
CCDC180-205ENST00000487976 ARAP1Q96P48 1450 aa15.18■□□□□ 0.02
CCDC180-205ENST00000487976 CDK11AQ9UQ88 783 aaPredicted RBP15.17■□□□□ 0.02
CCDC180-205ENST00000487976 CUX2O14529 1486 aa15.11■□□□□ 0.01
CCDC180-205ENST00000487976 TRIM52Q96A61 297 aa15.1■□□□□ 0.01
CCDC180-205ENST00000487976 RANGAP1P46060 587 aaPredicted RBP15.09■□□□□ 0.01
CCDC180-205ENST00000487976 IGF1RP08069 1367 aa15.09■□□□□ 0.01
CCDC180-205ENST00000487976 FGD5Q6ZNL6 1462 aa15.09■□□□□ 0.01
CCDC180-205ENST00000487976 ERICH6BQ5W0A0 696 aa15.08■□□□□ 0
CCDC180-205ENST00000487976 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
CCDC180-205ENST00000487976 ARHGAP35Q9NRY4 1499 aa15.06■□□□□ 0
CCDC180-205ENST00000487976 FANCD2Q9BXW9 1451 aa15.06■□□□□ 0
CCDC180-205ENST00000487976 PHF23Q9BUL5 403 aaPredicted RBP15.05■□□□□ 0
CCDC180-205ENST00000487976 DNMBPQ6XZF7 1577 aa15.03■□□□□ -0
CCDC180-205ENST00000487976 CCER2I3L3R5 266 aa15.03■□□□□ -0
CCDC180-205ENST00000487976 SALL2Q9Y467 1007 aaPredicted RBP15.02■□□□□ -0
CCDC180-205ENST00000487976 CARMIL1Q5VZK9 1371 aa15.02■□□□□ -0
CCDC180-205ENST00000487976 PLEKHG5O94827 1062 aa15.01□□□□□ -0.01
CCDC180-205ENST00000487976 RRBP1Q9P2E9 1410 aaKnown RBP15□□□□□ -0.01
CCDC180-205ENST00000487976 NBR1Q14596 966 aa14.99□□□□□ -0.01
CCDC180-205ENST00000487976 MAP3K1Q13233 1512 aa14.99□□□□□ -0.01
CCDC180-205ENST00000487976 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
CCDC180-205ENST00000487976 ANP32CO43423 234 aa14.98□□□□□ -0.01
CCDC180-205ENST00000487976 ARXQ96QS3 562 aa14.97□□□□□ -0.01
CCDC180-205ENST00000487976 NOP58Q9Y2X3 529 aaKnown RBP14.97□□□□□ -0.01
CCDC180-205ENST00000487976 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
CCDC180-205ENST00000487976 KANK4Q5T7N3 995 aaPredicted RBP14.97□□□□□ -0.01
CCDC180-205ENST00000487976 IRX6P78412 446 aaPredicted RBP14.96□□□□□ -0.01
CCDC180-205ENST00000487976 RTN4Q9NQC3 1192 aaKnown RBP14.96□□□□□ -0.01
CCDC180-205ENST00000487976 TOPBP1Q92547 1522 aa14.96□□□□□ -0.01
CCDC180-205ENST00000487976 PPP1R15AO75807 674 aaPredicted RBP14.95□□□□□ -0.02
CCDC180-205ENST00000487976 LAMC3Q9Y6N6 1575 aa14.94□□□□□ -0.02
CCDC180-205ENST00000487976 POLA1P09884 1462 aaPredicted RBP14.93□□□□□ -0.02
CCDC180-205ENST00000487976 CCDC136Q96JN2 1154 aa14.93□□□□□ -0.02
CCDC180-205ENST00000487976 RTL5Q5HYW3 569 aaPredicted RBP14.91□□□□□ -0.02
CCDC180-205ENST00000487976 TIAM1Q13009 1591 aa14.91□□□□□ -0.02
CCDC180-205ENST00000487976 CUL7Q14999 1698 aa14.91□□□□□ -0.02
CCDC180-205ENST00000487976 FHAD1B1AJZ9 1412 aa14.9□□□□□ -0.02
CCDC180-205ENST00000487976 CCNB3Q8WWL7 1395 aa14.9□□□□□ -0.02
CCDC180-205ENST00000487976 PPP4R2Q9NY27 417 aa14.9□□□□□ -0.02
CCDC180-205ENST00000487976 NESP48681 1621 aa14.89□□□□□ -0.03
CCDC180-205ENST00000487976 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
CCDC180-205ENST00000487976 WDR97A6NE52 1622 aa14.87□□□□□ -0.03
CCDC180-205ENST00000487976 EFCAB5A4FU69 1503 aa14.87□□□□□ -0.03
CCDC180-205ENST00000487976 UBE2Q2Q8WVN8 375 aa14.87□□□□□ -0.03
CCDC180-205ENST00000487976 PAK3O75914 559 aaPredicted RBP14.86□□□□□ -0.03
CCDC180-205ENST00000487976 HNRNPUQ00839 825 aaKnown RBP eCLIP14.86□□□□□ -0.03
CCDC180-205ENST00000487976 MAPKBP1O60336 1514 aa14.86□□□□□ -0.03
CCDC180-205ENST00000487976 IL27Q8NEV9 243 aa14.85□□□□□ -0.03
CCDC180-205ENST00000487976 CFAP43Q8NDM7 1665 aa14.84□□□□□ -0.03
CCDC180-205ENST00000487976 LRRC9Q6ZRR7 1453 aa14.84□□□□□ -0.03
CCDC180-205ENST00000487976 URB2Q14146 1524 aaKnown RBP14.83□□□□□ -0.04
CCDC180-205ENST00000487976 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.83□□□□□ -0.04
CCDC180-205ENST00000487976 PDS5BQ9NTI5 1447 aa14.82□□□□□ -0.04
CCDC180-205ENST00000487976 CTTNBP2Q8WZ74 1663 aa14.82□□□□□ -0.04
CCDC180-205ENST00000487976 RAB3GAP2Q9H2M9 1393 aa14.82□□□□□ -0.04
CCDC180-205ENST00000487976 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.04
CCDC180-205ENST00000487976 HIRIP3Q9BW71 556 aaPredicted RBP14.81□□□□□ -0.04
CCDC180-205ENST00000487976 PCF11O94913 1555 aaKnown RBP14.81□□□□□ -0.04
CCDC180-205ENST00000487976 FYCO1Q9BQS8 1478 aa14.81□□□□□ -0.04
CCDC180-205ENST00000487976 ABCA5Q8WWZ7 1642 aa14.79□□□□□ -0.04
CCDC180-205ENST00000487976 B4GALNT3Q6L9W6 998 aa14.79□□□□□ -0.04
CCDC180-205ENST00000487976 ANP32AP39687 249 aaKnown RBP14.78□□□□□ -0.04
CCDC180-205ENST00000487976 CASKIN1Q8WXD9 1431 aa14.78□□□□□ -0.04
CCDC180-205ENST00000487976 SIN3AQ96ST3 1273 aa14.77□□□□□ -0.05
CCDC180-205ENST00000487976 FHOD3Q2V2M9 1422 aa14.75□□□□□ -0.05
CCDC180-205ENST00000487976 KLHL34Q8N239 644 aa14.75□□□□□ -0.05
CCDC180-205ENST00000487976 IPO9Q96P70 1041 aaKnown RBP14.75□□□□□ -0.05
CCDC180-205ENST00000487976 ZBTB47Q9UFB7 747 aaPredicted RBP14.75□□□□□ -0.05
CCDC180-205ENST00000487976 TIMELESSQ9UNS1 1208 aa14.74□□□□□ -0.05
CCDC180-205ENST00000487976 FMN1Q68DA7 1419 aa14.74□□□□□ -0.05
CCDC180-205ENST00000487976 GAPVD1Q14C86 1478 aa14.73□□□□□ -0.05
CCDC180-205ENST00000487976 PHLDB1Q86UU1 1377 aa14.73□□□□□ -0.05
CCDC180-205ENST00000487976 PODXL2Q9NZ53 605 aa14.72□□□□□ -0.05
CCDC180-205ENST00000487976 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.71□□□□□ -0.05
CCDC180-205ENST00000487976 SAMD9Q5K651 1589 aa14.71□□□□□ -0.05
CCDC180-205ENST00000487976 SETD5Q9C0A6 1442 aa14.71□□□□□ -0.06
CCDC180-205ENST00000487976 P3H3Q8IVL6 736 aa14.7□□□□□ -0.06
CCDC180-205ENST00000487976 KIF21AQ7Z4S6 1674 aa14.7□□□□□ -0.06
CCDC180-205ENST00000487976 TDRD9Q8NDG6 1382 aaKnown RBP14.69□□□□□ -0.06
CCDC180-205ENST00000487976 SNAPC4Q5SXM2 1469 aa14.68□□□□□ -0.06
CCDC180-205ENST00000487976 TARBP1Q13395 1621 aaKnown RBP14.68□□□□□ -0.06
CCDC180-205ENST00000487976 WASHC2AQ641Q2 1341 aa14.67□□□□□ -0.06
CCDC180-205ENST00000487976 THOC2Q8NI27 1593 aaKnown RBP14.66□□□□□ -0.06
CCDC180-205ENST00000487976 ERCC6Q03468 1493 aa14.64□□□□□ -0.07
CCDC180-205ENST00000487976 ATP1B4Q9UN42 357 aaPredicted RBP14.64□□□□□ -0.07
CCDC180-205ENST00000487976 FAM50AQ14320 339 aaKnown RBP14.63□□□□□ -0.07
CCDC180-205ENST00000487976 GRIN2BQ13224 1484 aa14.62□□□□□ -0.07
CCDC180-205ENST00000487976 C11orf95C9JLR9 678 aaPredicted RBP14.62□□□□□ -0.07
CCDC180-205ENST00000487976 PBRM1Q86U86 1689 aa14.6□□□□□ -0.07
CCDC180-205ENST00000487976 NEFMP07197 916 aa14.6□□□□□ -0.07
CCDC180-205ENST00000487976 USP35Q9P2H5 1018 aa14.6□□□□□ -0.07
CCDC180-205ENST00000487976 FGD6Q6ZV73 1430 aa14.6□□□□□ -0.07
CCDC180-205ENST00000487976 MRC2Q9UBG0 1479 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms