RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
UBE4B-209ENST00000487244 PBRM1Q86U86 1689 aa12.57□□□□□ -0.4
UBE4B-209ENST00000487244 ABCA10Q8WWZ4 1543 aa12.56□□□□□ -0.4
UBE4B-209ENST00000487244 ABCA5Q8WWZ7 1642 aa12.55□□□□□ -0.4
UBE4B-209ENST00000487244 ZBTB22O15209 634 aa12.54□□□□□ -0.4
UBE4B-209ENST00000487244 SNAPC4Q5SXM2 1469 aa12.53□□□□□ -0.4
UBE4B-209ENST00000487244 APLP2Q06481 763 aa12.52□□□□□ -0.41
UBE4B-209ENST00000487244 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.41
UBE4B-209ENST00000487244 GAPVD1Q14C86 1478 aa12.52□□□□□ -0.41
UBE4B-209ENST00000487244 OSCARQ8IYS5 282 aa12.51□□□□□ -0.41
UBE4B-209ENST00000487244 GRIN2BQ13224 1484 aa12.51□□□□□ -0.41
UBE4B-209ENST00000487244 MAGI1Q96QZ7 1491 aaPredicted RBP12.48□□□□□ -0.41
UBE4B-209ENST00000487244 FBLN2P98095 1184 aa12.46□□□□□ -0.41
UBE4B-209ENST00000487244 EHMT2Q96KQ7 1210 aa12.46□□□□□ -0.41
UBE4B-209ENST00000487244 CAPN15O75808 1086 aa12.45□□□□□ -0.42
UBE4B-209ENST00000487244 ADAMTS12P58397 1594 aa12.44□□□□□ -0.42
UBE4B-209ENST00000487244 SPINK5Q9NQ38 1064 aaPredicted RBP12.44□□□□□ -0.42
UBE4B-209ENST00000487244 SYNJ2O15056 1496 aa12.44□□□□□ -0.42
UBE4B-209ENST00000487244 RIMBP3CA6NJZ7 1639 aa12.43□□□□□ -0.42
UBE4B-209ENST00000487244 RIMBP3BA6NNM3 1639 aa12.43□□□□□ -0.42
UBE4B-209ENST00000487244 RIMBP3Q9UFD9 1639 aa12.43□□□□□ -0.42
UBE4B-209ENST00000487244 CLASP1Q7Z460 1538 aa12.41□□□□□ -0.42
UBE4B-209ENST00000487244 ERICH3Q5RHP9 1530 aa12.4□□□□□ -0.42
UBE4B-209ENST00000487244 ARHGEF11O15085 1522 aa12.39□□□□□ -0.43
UBE4B-209ENST00000487244 CHMP7Q8WUX9 453 aaPredicted RBP12.39□□□□□ -0.43
UBE4B-209ENST00000487244 GRIN2AQ12879 1464 aa12.37□□□□□ -0.43
UBE4B-209ENST00000487244 FHAD1B1AJZ9 1412 aa12.36□□□□□ -0.43
UBE4B-209ENST00000487244 CEP170Q5SW79 1584 aa12.35□□□□□ -0.43
UBE4B-209ENST00000487244 CSRNP3Q8WYN3 585 aa12.35□□□□□ -0.43
UBE4B-209ENST00000487244 TRHP20396 242 aaPredicted RBP12.34□□□□□ -0.43
UBE4B-209ENST00000487244 TRIM41Q8WV44 630 aa12.34□□□□□ -0.43
UBE4B-209ENST00000487244 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.44
UBE4B-209ENST00000487244 KIF27Q86VH2 1401 aa12.33□□□□□ -0.44
UBE4B-209ENST00000487244 NUP160Q12769 1436 aa12.31□□□□□ -0.44
UBE4B-209ENST00000487244 CUL7Q14999 1698 aa12.3□□□□□ -0.44
UBE4B-209ENST00000487244 ARAP1Q96P48 1450 aa12.3□□□□□ -0.44
UBE4B-209ENST00000487244 IGF1RP08069 1367 aa12.3□□□□□ -0.44
UBE4B-209ENST00000487244 RUSC2Q8N2Y8 1516 aa12.28□□□□□ -0.44
UBE4B-209ENST00000487244 ERCC6L2Q5T890 1561 aa12.27□□□□□ -0.44
UBE4B-209ENST00000487244 SHROOM2Q13796 1616 aa12.26□□□□□ -0.45
UBE4B-209ENST00000487244 ATXN8OSP0DMR3 200 aa12.24□□□□□ -0.45
UBE4B-209ENST00000487244 DSG3P32926 999 aa12.23□□□□□ -0.45
UBE4B-209ENST00000487244 CYB5RLQ6IPT4 315 aa12.23□□□□□ -0.45
UBE4B-209ENST00000487244 CARMIL1Q5VZK9 1371 aa12.21□□□□□ -0.45
UBE4B-209ENST00000487244 ATF5Q9Y2D1 282 aaPredicted RBP12.21□□□□□ -0.45
UBE4B-209ENST00000487244 ABCB7O75027 752 aa12.17□□□□□ -0.46
UBE4B-209ENST00000487244 KIAA0586Q9BVV6 1533 aa12.16□□□□□ -0.46
UBE4B-209ENST00000487244 PRG4Q92954 1404 aaPredicted RBP12.16□□□□□ -0.46
UBE4B-209ENST00000487244 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
UBE4B-209ENST00000487244 JPH4Q96JJ6 628 aa12.14□□□□□ -0.47
UBE4B-209ENST00000487244 IQGAP2Q13576 1575 aa12.13□□□□□ -0.47
UBE4B-209ENST00000487244 CTTNBP2Q8WZ74 1663 aa12.1□□□□□ -0.47
UBE4B-209ENST00000487244 PRXQ9BXM0 1461 aa12.1□□□□□ -0.47
UBE4B-209ENST00000487244 POLA2Q14181 598 aa12.09□□□□□ -0.47
UBE4B-209ENST00000487244 DISP1Q96F81 1524 aa12.05□□□□□ -0.48
UBE4B-209ENST00000487244 ADCY10Q96PN6 1610 aa12.04□□□□□ -0.48
UBE4B-209ENST00000487244 UGGT2Q9NYU1 1516 aa12.04□□□□□ -0.48
UBE4B-209ENST00000487244 EEA1Q15075 1411 aa12.03□□□□□ -0.48
UBE4B-209ENST00000487244 FAM9AQ8IZU1 332 aaPredicted RBP12.03□□□□□ -0.48
UBE4B-209ENST00000487244 KIAA0556O60303 1618 aa12.02□□□□□ -0.49
UBE4B-209ENST00000487244 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
UBE4B-209ENST00000487244 CARMIL2Q6F5E8 1435 aa12□□□□□ -0.49
UBE4B-209ENST00000487244 KIF21BO75037 1637 aa11.99□□□□□ -0.49
UBE4B-209ENST00000487244 PTPRGP23470 1445 aa11.98□□□□□ -0.49
UBE4B-209ENST00000487244 TNIKQ9UKE5 1360 aa11.98□□□□□ -0.49
UBE4B-209ENST00000487244 KIF13AQ9H1H9 1805 aa11.96□□□□□ -0.49
UBE4B-209ENST00000487244 GOLGA3Q08378 1498 aa11.93□□□□□ -0.5
UBE4B-209ENST00000487244 SAMD9Q5K651 1589 aa11.92□□□□□ -0.5
UBE4B-209ENST00000487244 MAPKBP1O60336 1514 aa11.92□□□□□ -0.5
UBE4B-209ENST00000487244 ABCC2Q92887 1545 aa11.92□□□□□ -0.5
UBE4B-209ENST00000487244 UACAQ9BZF9 1416 aa11.91□□□□□ -0.5
UBE4B-209ENST00000487244 UHRF1BP1LA0JNW5 1464 aa11.9□□□□□ -0.5
UBE4B-209ENST00000487244 PLB1Q6P1J6 1458 aa11.9□□□□□ -0.5
UBE4B-209ENST00000487244 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
UBE4B-209ENST00000487244 DIP2BQ9P265 1576 aa11.89□□□□□ -0.51
UBE4B-209ENST00000487244 ZCCHC11Q5TAX3 1644 aaKnown RBP11.89□□□□□ -0.51
UBE4B-209ENST00000487244 ABCA8O94911 1581 aa11.88□□□□□ -0.51
UBE4B-209ENST00000487244 RANGAP1P46060 587 aaPredicted RBP11.88□□□□□ -0.51
UBE4B-209ENST00000487244 P3H3Q8IVL6 736 aa11.88□□□□□ -0.51
UBE4B-209ENST00000487244 NPM1P06748 294 aaKnown RBP eCLIP11.87□□□□□ -0.51
UBE4B-209ENST00000487244 ABCC10Q5T3U5 1492 aa11.87□□□□□ -0.51
UBE4B-209ENST00000487244 KDM5BQ9UGL1 1544 aa11.86□□□□□ -0.51
UBE4B-209ENST00000487244 ASXL2Q76L83 1435 aa11.85□□□□□ -0.51
UBE4B-209ENST00000487244 TSPOAP1O95153 1857 aa11.84□□□□□ -0.51
UBE4B-209ENST00000487244 FHOD3Q2V2M9 1422 aa11.84□□□□□ -0.51
UBE4B-209ENST00000487244 EFCAB5A4FU69 1503 aa11.82□□□□□ -0.52
UBE4B-209ENST00000487244 UBTFP17480 764 aaKnown RBP11.82□□□□□ -0.52
UBE4B-209ENST00000487244 FAM69CQ0P6D2 419 aa11.82□□□□□ -0.52
UBE4B-209ENST00000487244 RAPGEF6Q8TEU7 1601 aa11.82□□□□□ -0.52
UBE4B-209ENST00000487244 PPRC1Q5VV67 1664 aaKnown RBP11.79□□□□□ -0.52
UBE4B-209ENST00000487244 ARID3CA6NKF2 412 aa11.79□□□□□ -0.52
UBE4B-209ENST00000487244 ARHGAP35Q9NRY4 1499 aa11.78□□□□□ -0.52
UBE4B-209ENST00000487244 EPRSP07814 1512 aaKnown RBP11.78□□□□□ -0.52
UBE4B-209ENST00000487244 GLI2P10070 1586 aa11.78□□□□□ -0.52
UBE4B-209ENST00000487244 NUP153P49790 1475 aaKnown RBP11.77□□□□□ -0.52
UBE4B-209ENST00000487244 WDR7Q9Y4E6 1490 aa11.77□□□□□ -0.52
UBE4B-209ENST00000487244 ATP10BO94823 1461 aa11.76□□□□□ -0.53
UBE4B-209ENST00000487244 MAP3K4Q9Y6R4 1608 aa11.76□□□□□ -0.53
UBE4B-209ENST00000487244 LRRIQ1Q96JM4 1722 aa11.72□□□□□ -0.53
UBE4B-209ENST00000487244 RBM42Q9BTD8 480 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms