RNA–Protein interactions for RNA: ENST00000486271.5

NEPRO-217, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 2,842 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-217ENST00000486271 TIAM1Q13009 1591 aa16.94■□□□□ 0.3
NEPRO-217ENST00000486271 DDX10Q13206 875 aaKnown RBP16.94■□□□□ 0.3
NEPRO-217ENST00000486271 RAD54L2Q9Y4B4 1467 aa16.94■□□□□ 0.3
NEPRO-217ENST00000486271 SUPT16HQ9Y5B9 1047 aaKnown RBP16.93■□□□□ 0.3
NEPRO-217ENST00000486271 SETD5Q9C0A6 1442 aa16.93■□□□□ 0.3
NEPRO-217ENST00000486271 LRRC9Q6ZRR7 1453 aa16.93■□□□□ 0.3
NEPRO-217ENST00000486271 MAPKBP1O60336 1514 aa16.93■□□□□ 0.3
NEPRO-217ENST00000486271 FHOD3Q2V2M9 1422 aa16.92■□□□□ 0.3
NEPRO-217ENST00000486271 FANCD2Q9BXW9 1451 aa16.87■□□□□ 0.29
NEPRO-217ENST00000486271 WDR97A6NE52 1622 aa16.85■□□□□ 0.29
NEPRO-217ENST00000486271 NESP48681 1621 aa16.85■□□□□ 0.29
NEPRO-217ENST00000486271 PCF11O94913 1555 aaKnown RBP16.84■□□□□ 0.29
NEPRO-217ENST00000486271 BCANQ96GW7 911 aa16.82■□□□□ 0.28
NEPRO-217ENST00000486271 PRDM2Q13029 1718 aa16.82■□□□□ 0.28
NEPRO-217ENST00000486271 FHAD1B1AJZ9 1412 aa16.82■□□□□ 0.28
NEPRO-217ENST00000486271 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
NEPRO-217ENST00000486271 MAP3K1Q13233 1512 aa16.79■□□□□ 0.28
NEPRO-217ENST00000486271 POLA1P09884 1462 aaPredicted RBP16.77■□□□□ 0.28
NEPRO-217ENST00000486271 TDRD9Q8NDG6 1382 aaKnown RBP16.76■□□□□ 0.27
NEPRO-217ENST00000486271 PPP1R15AO75807 674 aaPredicted RBP16.75■□□□□ 0.27
NEPRO-217ENST00000486271 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
NEPRO-217ENST00000486271 TOPBP1Q92547 1522 aa16.74■□□□□ 0.27
NEPRO-217ENST00000486271 TRIM52Q96A61 297 aa16.73■□□□□ 0.27
NEPRO-217ENST00000486271 ARID3CA6NKF2 412 aa16.71■□□□□ 0.27
NEPRO-217ENST00000486271 MTUS2Q5JR59 1369 aa16.71■□□□□ 0.27
NEPRO-217ENST00000486271 CFAP43Q8NDM7 1665 aa16.7■□□□□ 0.26
NEPRO-217ENST00000486271 CASKIN1Q8WXD9 1431 aa16.7■□□□□ 0.26
NEPRO-217ENST00000486271 ABCA10Q8WWZ4 1543 aa16.7■□□□□ 0.26
NEPRO-217ENST00000486271 PTPRKQ15262 1439 aa16.7■□□□□ 0.26
NEPRO-217ENST00000486271 FKBP8Q14318 412 aa16.69■□□□□ 0.26
NEPRO-217ENST00000486271 CHIC2Q9UKJ5 165 aa16.69■□□□□ 0.26
NEPRO-217ENST00000486271 DNMBPQ6XZF7 1577 aa16.69■□□□□ 0.26
NEPRO-217ENST00000486271 TSHZ2Q9NRE2 1034 aa16.68■□□□□ 0.26
NEPRO-217ENST00000486271 FYCO1Q9BQS8 1478 aa16.68■□□□□ 0.26
NEPRO-217ENST00000486271 FGD6Q6ZV73 1430 aa16.67■□□□□ 0.26
NEPRO-217ENST00000486271 RRP7BPQ9NSQ0 103 aa16.66■□□□□ 0.26
NEPRO-217ENST00000486271 TONSLQ96HA7 1378 aa16.65■□□□□ 0.26
NEPRO-217ENST00000486271 ANP32CO43423 234 aa16.63■□□□□ 0.25
NEPRO-217ENST00000486271 URB2Q14146 1524 aaKnown RBP16.63■□□□□ 0.25
NEPRO-217ENST00000486271 CCDC18Q5T9S5 1454 aa16.62■□□□□ 0.25
NEPRO-217ENST00000486271 FMN1Q68DA7 1419 aa16.62■□□□□ 0.25
NEPRO-217ENST00000486271 TIMELESSQ9UNS1 1208 aa16.61■□□□□ 0.25
NEPRO-217ENST00000486271 EFCAB5A4FU69 1503 aa16.61■□□□□ 0.25
NEPRO-217ENST00000486271 SNAPC4Q5SXM2 1469 aa16.6■□□□□ 0.25
NEPRO-217ENST00000486271 AQRO60306 1485 aaKnown RBP eCLIP16.6■□□□□ 0.25
NEPRO-217ENST00000486271 NCOA2Q15596 1464 aa16.57■□□□□ 0.24
NEPRO-217ENST00000486271 CTTNBP2Q8WZ74 1663 aa16.57■□□□□ 0.24
NEPRO-217ENST00000486271 FOXD1Q16676 465 aa16.56■□□□□ 0.24
NEPRO-217ENST00000486271 GAPVD1Q14C86 1478 aa16.56■□□□□ 0.24
NEPRO-217ENST00000486271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.56■□□□□ 0.24
NEPRO-217ENST00000486271 CUL7Q14999 1698 aa16.56■□□□□ 0.24
NEPRO-217ENST00000486271 NAIPQ13075 1403 aa16.55■□□□□ 0.24
NEPRO-217ENST00000486271 HFM1A2PYH4 1435 aa16.54■□□□□ 0.24
NEPRO-217ENST00000486271 UACAQ9BZF9 1416 aa16.54■□□□□ 0.24
NEPRO-217ENST00000486271 LRRIQ1Q96JM4 1722 aa16.54■□□□□ 0.24
NEPRO-217ENST00000486271 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
NEPRO-217ENST00000486271 PTPN23Q9H3S7 1636 aa16.52■□□□□ 0.23
NEPRO-217ENST00000486271 CCER2I3L3R5 266 aa16.51■□□□□ 0.23
NEPRO-217ENST00000486271 MYT1Q01538 1121 aa16.51■□□□□ 0.23
NEPRO-217ENST00000486271 GRIN2BQ13224 1484 aa16.5■□□□□ 0.23
NEPRO-217ENST00000486271 NEFLP07196 543 aa16.5■□□□□ 0.23
NEPRO-217ENST00000486271 MAGI3Q5TCQ9 1506 aa16.49■□□□□ 0.23
NEPRO-217ENST00000486271 IRX6P78412 446 aaPredicted RBP16.49■□□□□ 0.23
NEPRO-217ENST00000486271 HSPA5P11021 654 aaKnown RBP16.49■□□□□ 0.23
NEPRO-217ENST00000486271 HNRNPUQ00839 825 aaKnown RBP eCLIP16.46■□□□□ 0.23
NEPRO-217ENST00000486271 SAMD9Q5K651 1589 aa16.46■□□□□ 0.23
NEPRO-217ENST00000486271 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
NEPRO-217ENST00000486271 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
NEPRO-217ENST00000486271 CCDC184Q52MB2 194 aa16.44■□□□□ 0.22
NEPRO-217ENST00000486271 CNGB1Q14028 1251 aaPredicted RBP16.42■□□□□ 0.22
NEPRO-217ENST00000486271 L3MBTL2Q969R5 705 aa16.42■□□□□ 0.22
NEPRO-217ENST00000486271 MPHOSPH9Q99550 1183 aa16.42■□□□□ 0.22
NEPRO-217ENST00000486271 PDS5BQ9NTI5 1447 aa16.42■□□□□ 0.22
NEPRO-217ENST00000486271 KDM6BO15054 1643 aa16.42■□□□□ 0.22
NEPRO-217ENST00000486271 SUPT6HQ7KZ85 1726 aaKnown RBP16.42■□□□□ 0.22
NEPRO-217ENST00000486271 LAMC3Q9Y6N6 1575 aa16.42■□□□□ 0.22
NEPRO-217ENST00000486271 C11orf95C9JLR9 678 aaPredicted RBP16.41■□□□□ 0.22
NEPRO-217ENST00000486271 CDK13Q14004 1512 aaKnown RBP16.41■□□□□ 0.22
NEPRO-217ENST00000486271 KDM5BQ9UGL1 1544 aa16.41■□□□□ 0.22
NEPRO-217ENST00000486271 ZNF644Q9H582 1327 aaPredicted RBP16.41■□□□□ 0.22
NEPRO-217ENST00000486271 DENND4BO75064 1496 aaPredicted RBP16.41■□□□□ 0.22
NEPRO-217ENST00000486271 UGGT2Q9NYU1 1516 aa16.4■□□□□ 0.22
NEPRO-217ENST00000486271 EHBP1L1Q8N3D4 1523 aa16.39■□□□□ 0.21
NEPRO-217ENST00000486271 KIF21AQ7Z4S6 1674 aa16.37■□□□□ 0.21
NEPRO-217ENST00000486271 EIF4G2P78344 907 aaKnown RBP eCLIP16.37■□□□□ 0.21
NEPRO-217ENST00000486271 RBM19Q9Y4C8 960 aaKnown RBP16.36■□□□□ 0.21
NEPRO-217ENST00000486271 NBPF8Q3BBV2 869 aa16.35■□□□□ 0.21
NEPRO-217ENST00000486271 EPRSP07814 1512 aaKnown RBP16.35■□□□□ 0.21
NEPRO-217ENST00000486271 FAM9BQ8IZU0 186 aa16.34■□□□□ 0.21
NEPRO-217ENST00000486271 ARHGEF11O15085 1522 aa16.33■□□□□ 0.2
NEPRO-217ENST00000486271 TARBP1Q13395 1621 aaKnown RBP16.32■□□□□ 0.2
NEPRO-217ENST00000486271 ANP32EQ9BTT0 268 aa16.32■□□□□ 0.2
NEPRO-217ENST00000486271 SENP3-EIF4A1A0A087X0R7 540 aa16.32■□□□□ 0.2
NEPRO-217ENST00000486271 THOC2Q8NI27 1593 aaKnown RBP16.31■□□□□ 0.2
NEPRO-217ENST00000486271 POLR3GLQ9BT43 218 aa16.3■□□□□ 0.2
NEPRO-217ENST00000486271 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
NEPRO-217ENST00000486271 ZNF777Q9ULD5 760 aaPredicted RBP16.29■□□□□ 0.2
NEPRO-217ENST00000486271 ZNF326Q5BKZ1 582 aaKnown RBP16.29■□□□□ 0.2
NEPRO-217ENST00000486271 TCOF1Q13428 1488 aaKnown RBP16.29■□□□□ 0.2
NEPRO-217ENST00000486271 IQGAP2Q13576 1575 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 235.8 ms