RNA–Protein interactions for RNA: ENST00000484801.5

KHDC1-205, Transcript of KH domain containing 1, humanhuman

TSL 2

Gene KHDC1, Length 2,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-205ENST00000484801 CLIP1P30622 1438 aa19.82■□□□□ 0.76
KHDC1-205ENST00000484801 KCNH8Q96L42 1107 aa19.8■□□□□ 0.76
KHDC1-205ENST00000484801 DEKP35659 375 aaKnown RBP19.79■□□□□ 0.76
KHDC1-205ENST00000484801 ERICH6BQ5W0A0 696 aa19.77■□□□□ 0.75
KHDC1-205ENST00000484801 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
KHDC1-205ENST00000484801 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
KHDC1-205ENST00000484801 ITGAEP38570 1179 aa19.74■□□□□ 0.75
KHDC1-205ENST00000484801 CDK11AQ9UQ88 783 aaPredicted RBP19.74■□□□□ 0.75
KHDC1-205ENST00000484801 DNMBPQ6XZF7 1577 aa19.72■□□□□ 0.75
KHDC1-205ENST00000484801 CCER2I3L3R5 266 aa19.69■□□□□ 0.74
KHDC1-205ENST00000484801 IFT140Q96RY7 1462 aa19.66■□□□□ 0.74
KHDC1-205ENST00000484801 ZNF608Q9ULD9 1512 aaPredicted RBP19.62■□□□□ 0.73
KHDC1-205ENST00000484801 ANO8Q9HCE9 1232 aaPredicted RBP19.62■□□□□ 0.73
KHDC1-205ENST00000484801 RRBP1Q9P2E9 1410 aaKnown RBP19.61■□□□□ 0.73
KHDC1-205ENST00000484801 POLA1P09884 1462 aaPredicted RBP19.58■□□□□ 0.73
KHDC1-205ENST00000484801 TARBP1Q13395 1621 aaKnown RBP19.58■□□□□ 0.72
KHDC1-205ENST00000484801 CUX1P39880 1505 aa19.56■□□□□ 0.72
KHDC1-205ENST00000484801 TRIM52Q96A61 297 aa19.55■□□□□ 0.72
KHDC1-205ENST00000484801 DDX10Q13206 875 aaKnown RBP19.55■□□□□ 0.72
KHDC1-205ENST00000484801 SYNJ1O43426 1573 aa19.53■□□□□ 0.72
KHDC1-205ENST00000484801 PPP1R15AO75807 674 aaPredicted RBP19.53■□□□□ 0.72
KHDC1-205ENST00000484801 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
KHDC1-205ENST00000484801 ANP32CO43423 234 aa19.53■□□□□ 0.72
KHDC1-205ENST00000484801 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
KHDC1-205ENST00000484801 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
KHDC1-205ENST00000484801 MAPKBP1O60336 1514 aa19.51■□□□□ 0.71
KHDC1-205ENST00000484801 NOP58Q9Y2X3 529 aaKnown RBP19.49■□□□□ 0.71
KHDC1-205ENST00000484801 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.71
KHDC1-205ENST00000484801 TOP2BQ02880 1626 aa19.48■□□□□ 0.71
KHDC1-205ENST00000484801 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
KHDC1-205ENST00000484801 WDR97A6NE52 1622 aa19.46■□□□□ 0.71
KHDC1-205ENST00000484801 BIVM-ERCC5R4GMW8 1640 aa19.45■□□□□ 0.7
KHDC1-205ENST00000484801 SALL2Q9Y467 1007 aaPredicted RBP19.44■□□□□ 0.7
KHDC1-205ENST00000484801 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
KHDC1-205ENST00000484801 PPP4R2Q9NY27 417 aa19.44■□□□□ 0.7
KHDC1-205ENST00000484801 UBE2Q2Q8WVN8 375 aa19.42■□□□□ 0.7
KHDC1-205ENST00000484801 TIMELESSQ9UNS1 1208 aa19.42■□□□□ 0.7
KHDC1-205ENST00000484801 CCNB3Q8WWL7 1395 aa19.42■□□□□ 0.7
KHDC1-205ENST00000484801 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
KHDC1-205ENST00000484801 RTL5Q5HYW3 569 aaPredicted RBP19.39■□□□□ 0.69
KHDC1-205ENST00000484801 NBR1Q14596 966 aa19.37■□□□□ 0.69
KHDC1-205ENST00000484801 RAB3GAP2Q9H2M9 1393 aa19.37■□□□□ 0.69
KHDC1-205ENST00000484801 CHD1O14646 1710 aa19.37■□□□□ 0.69
KHDC1-205ENST00000484801 RIMBP3CA6NJZ7 1639 aa19.36■□□□□ 0.69
KHDC1-205ENST00000484801 RIMBP3BA6NNM3 1639 aa19.36■□□□□ 0.69
KHDC1-205ENST00000484801 RIMBP3Q9UFD9 1639 aa19.36■□□□□ 0.69
KHDC1-205ENST00000484801 ARAP1Q96P48 1450 aa19.35■□□□□ 0.69
KHDC1-205ENST00000484801 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.69
KHDC1-205ENST00000484801 KANK4Q5T7N3 995 aaPredicted RBP19.31■□□□□ 0.68
KHDC1-205ENST00000484801 ABCA10Q8WWZ4 1543 aa19.31■□□□□ 0.68
KHDC1-205ENST00000484801 HNRNPUQ00839 825 aaKnown RBP eCLIP19.3■□□□□ 0.68
KHDC1-205ENST00000484801 IRX6P78412 446 aaPredicted RBP19.29■□□□□ 0.68
KHDC1-205ENST00000484801 SNAPC4Q5SXM2 1469 aa19.29■□□□□ 0.68
KHDC1-205ENST00000484801 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
KHDC1-205ENST00000484801 SETD5Q9C0A6 1442 aa19.27■□□□□ 0.68
KHDC1-205ENST00000484801 PAK3O75914 559 aaPredicted RBP19.27■□□□□ 0.68
KHDC1-205ENST00000484801 ABCA5Q8WWZ7 1642 aa19.26■□□□□ 0.67
KHDC1-205ENST00000484801 GAPVD1Q14C86 1478 aa19.26■□□□□ 0.67
KHDC1-205ENST00000484801 ANP32AP39687 249 aaKnown RBP19.25■□□□□ 0.67
KHDC1-205ENST00000484801 ARHGEF11O15085 1522 aa19.25■□□□□ 0.67
KHDC1-205ENST00000484801 PBRM1Q86U86 1689 aa19.25■□□□□ 0.67
KHDC1-205ENST00000484801 FBLN2P98095 1184 aa19.24■□□□□ 0.67
KHDC1-205ENST00000484801 IPO9Q96P70 1041 aaKnown RBP19.24■□□□□ 0.67
KHDC1-205ENST00000484801 MAGI1Q96QZ7 1491 aaPredicted RBP19.24■□□□□ 0.67
KHDC1-205ENST00000484801 IL27Q8NEV9 243 aa19.23■□□□□ 0.67
KHDC1-205ENST00000484801 CCDC136Q96JN2 1154 aa19.22■□□□□ 0.67
KHDC1-205ENST00000484801 WASHC2AQ641Q2 1341 aa19.18■□□□□ 0.66
KHDC1-205ENST00000484801 RANGAP1P46060 587 aaPredicted RBP19.18■□□□□ 0.66
KHDC1-205ENST00000484801 ZBTB47Q9UFB7 747 aaPredicted RBP19.18■□□□□ 0.66
KHDC1-205ENST00000484801 SYNJ2O15056 1496 aa19.17■□□□□ 0.66
KHDC1-205ENST00000484801 USP35Q9P2H5 1018 aa19.16■□□□□ 0.66
KHDC1-205ENST00000484801 KIF27Q86VH2 1401 aa19.16■□□□□ 0.66
KHDC1-205ENST00000484801 C11orf95C9JLR9 678 aaPredicted RBP19.16■□□□□ 0.66
KHDC1-205ENST00000484801 B4GALNT3Q6L9W6 998 aa19.16■□□□□ 0.66
KHDC1-205ENST00000484801 CHMP7Q8WUX9 453 aaPredicted RBP19.16■□□□□ 0.66
KHDC1-205ENST00000484801 PRXQ9BXM0 1461 aa19.15■□□□□ 0.66
KHDC1-205ENST00000484801 SIN3AQ96ST3 1273 aa19.15■□□□□ 0.66
KHDC1-205ENST00000484801 MAP3K1Q13233 1512 aa19.14■□□□□ 0.65
KHDC1-205ENST00000484801 CLASP1Q7Z460 1538 aa19.12■□□□□ 0.65
KHDC1-205ENST00000484801 HIRIP3Q9BW71 556 aaPredicted RBP19.1■□□□□ 0.65
KHDC1-205ENST00000484801 RTN4Q9NQC3 1192 aaKnown RBP19.1■□□□□ 0.65
KHDC1-205ENST00000484801 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.1■□□□□ 0.65
KHDC1-205ENST00000484801 ADAMTS12P58397 1594 aa19.09■□□□□ 0.65
KHDC1-205ENST00000484801 WASHC2CQ9Y4E1 1318 aa19.07■□□□□ 0.64
KHDC1-205ENST00000484801 ZBED9Q6R2W3 1325 aa19.07■□□□□ 0.64
KHDC1-205ENST00000484801 FHAD1B1AJZ9 1412 aa19.07■□□□□ 0.64
KHDC1-205ENST00000484801 TIAM1Q13009 1591 aa19.06■□□□□ 0.64
KHDC1-205ENST00000484801 TONSLQ96HA7 1378 aa19.04■□□□□ 0.64
KHDC1-205ENST00000484801 GRIN2AQ12879 1464 aa19.04■□□□□ 0.64
KHDC1-205ENST00000484801 ARHGAP35Q9NRY4 1499 aa19.01■□□□□ 0.63
KHDC1-205ENST00000484801 IGF1RP08069 1367 aa19■□□□□ 0.63
KHDC1-205ENST00000484801 NCOA2Q15596 1464 aa18.98■□□□□ 0.63
KHDC1-205ENST00000484801 CEP170Q5SW79 1584 aa18.98■□□□□ 0.63
KHDC1-205ENST00000484801 NUP160Q12769 1436 aa18.97■□□□□ 0.63
KHDC1-205ENST00000484801 PPM1GO15355 546 aaPredicted RBP18.96■□□□□ 0.63
KHDC1-205ENST00000484801 NEFMP07197 916 aa18.96■□□□□ 0.63
KHDC1-205ENST00000484801 CYB5RLQ6IPT4 315 aa18.96■□□□□ 0.63
KHDC1-205ENST00000484801 LRRC9Q6ZRR7 1453 aa18.95■□□□□ 0.62
KHDC1-205ENST00000484801 CNTLNQ9NXG0 1405 aa18.94■□□□□ 0.62
KHDC1-205ENST00000484801 SMG6Q86US8 1419 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms