RNA–Protein interactions for RNA: ENST00000484801.5

KHDC1-205, Transcript of KH domain containing 1, humanhuman

TSL 2

Gene KHDC1, Length 2,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-205ENST00000484801 NISCHQ9Y2I1 1504 aa27.03■■□□□ 1.92
KHDC1-205ENST00000484801 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
KHDC1-205ENST00000484801 HRCP23327 699 aa23.81■■□□□ 1.4
KHDC1-205ENST00000484801 ABCC9O60706 1549 aa23.77■■□□□ 1.39
KHDC1-205ENST00000484801 PELP1Q8IZL8 1130 aaKnown RBP23.7■■□□□ 1.38
KHDC1-205ENST00000484801 PPARGC1BQ86YN6 1023 aaKnown RBP22.99■■□□□ 1.27
KHDC1-205ENST00000484801 PCGF6Q9BYE7 350 aa22.99■■□□□ 1.27
KHDC1-205ENST00000484801 MYT1Q01538 1121 aa22.99■■□□□ 1.27
KHDC1-205ENST00000484801 MYO15BQ96JP2 1530 aa22.83■■□□□ 1.25
KHDC1-205ENST00000484801 RB1CC1Q8TDY2 1594 aa22.76■■□□□ 1.23
KHDC1-205ENST00000484801 DCAF1Q9Y4B6 1507 aa22.73■■□□□ 1.23
KHDC1-205ENST00000484801 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
KHDC1-205ENST00000484801 NACADO15069 1562 aa22.69■■□□□ 1.22
KHDC1-205ENST00000484801 SHROOM4Q9ULL8 1493 aa22.63■■□□□ 1.21
KHDC1-205ENST00000484801 DCAF8L2P0C7V8 631 aa22.61■■□□□ 1.21
KHDC1-205ENST00000484801 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
KHDC1-205ENST00000484801 ZCCHC6Q5VYS8 1495 aaKnown RBP22.58■■□□□ 1.21
KHDC1-205ENST00000484801 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
KHDC1-205ENST00000484801 ZEB1P37275 1124 aaPredicted RBP22.46■■□□□ 1.19
KHDC1-205ENST00000484801 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.17
KHDC1-205ENST00000484801 UNC13AQ9UPW8 1703 aa22.32■■□□□ 1.16
KHDC1-205ENST00000484801 PABPN1Q86U42 306 aaKnown RBP eCLIP22.18■■□□□ 1.14
KHDC1-205ENST00000484801 DNAJC5BQ9UF47 199 aa22.13■■□□□ 1.13
KHDC1-205ENST00000484801 BICRAQ9NZM4 1560 aa22.13■■□□□ 1.13
KHDC1-205ENST00000484801 ACIN1Q9UKV3 1341 aaKnown RBP22.04■■□□□ 1.12
KHDC1-205ENST00000484801 SCRIBQ14160 1630 aa21.99■■□□□ 1.11
KHDC1-205ENST00000484801 LOC105371045A0A1W2PR82 267 aa21.92■■□□□ 1.1
KHDC1-205ENST00000484801 NEUROD1Q13562 356 aa21.84■■□□□ 1.09
KHDC1-205ENST00000484801 CENPBP07199 599 aaPredicted RBP21.82■■□□□ 1.08
KHDC1-205ENST00000484801 GTF3C3Q9Y5Q9 886 aa21.78■■□□□ 1.08
KHDC1-205ENST00000484801 TTBK1Q5TCY1 1321 aaPredicted RBP21.71■■□□□ 1.07
KHDC1-205ENST00000484801 EIF4G1Q04637 1599 aaKnown RBP21.53■■□□□ 1.04
KHDC1-205ENST00000484801 CC2D2AQ9P2K1 1620 aa21.53■■□□□ 1.04
KHDC1-205ENST00000484801 DIEXFQ68CQ4 756 aaKnown RBP21.46■■□□□ 1.03
KHDC1-205ENST00000484801 CECR2Q9BXF3 1484 aa21.4■■□□□ 1.02
KHDC1-205ENST00000484801 CCER1Q8TC90 406 aaPredicted RBP21.27■□□□□ 0.99
KHDC1-205ENST00000484801 TRIM41Q8WV44 630 aa21.19■□□□□ 0.98
KHDC1-205ENST00000484801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.17■□□□□ 0.98
KHDC1-205ENST00000484801 BCL11AQ9H165 835 aa21.08■□□□□ 0.96
KHDC1-205ENST00000484801 CLSPNQ9HAW4 1339 aa21.05■□□□□ 0.96
KHDC1-205ENST00000484801 ZNF316A6NFI3 1004 aaPredicted RBP21.02■□□□□ 0.96
KHDC1-205ENST00000484801 SMARCA4P51532 1647 aa21.02■□□□□ 0.95
KHDC1-205ENST00000484801 ANP32EQ9BTT0 268 aa20.98■□□□□ 0.95
KHDC1-205ENST00000484801 YTHDC1Q96MU7 727 aaKnown RBP20.96■□□□□ 0.95
KHDC1-205ENST00000484801 NCAPD3P42695 1498 aa20.95■□□□□ 0.94
KHDC1-205ENST00000484801 BAZ1AQ9NRL2 1556 aaPredicted RBP20.95■□□□□ 0.94
KHDC1-205ENST00000484801 ATAD2BQ9ULI0 1458 aa20.94■□□□□ 0.94
KHDC1-205ENST00000484801 FAM9AQ8IZU1 332 aaPredicted RBP20.9■□□□□ 0.94
KHDC1-205ENST00000484801 SMARCA2P51531 1590 aa20.88■□□□□ 0.93
KHDC1-205ENST00000484801 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
KHDC1-205ENST00000484801 HMGXB3Q12766 1538 aa20.83■□□□□ 0.93
KHDC1-205ENST00000484801 PEG3Q9GZU2 1588 aa20.82■□□□□ 0.92
KHDC1-205ENST00000484801 RSF1Q96T23 1441 aaPredicted RBP20.81■□□□□ 0.92
KHDC1-205ENST00000484801 MIER1Q8N108 512 aa20.79■□□□□ 0.92
KHDC1-205ENST00000484801 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.91
KHDC1-205ENST00000484801 BAZ1BQ9UIG0 1483 aaKnown RBP20.74■□□□□ 0.91
KHDC1-205ENST00000484801 SUPT16HQ9Y5B9 1047 aaKnown RBP20.73■□□□□ 0.91
KHDC1-205ENST00000484801 TSHZ2Q9NRE2 1034 aa20.69■□□□□ 0.9
KHDC1-205ENST00000484801 WIZO95785 1651 aa20.65■□□□□ 0.9
KHDC1-205ENST00000484801 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
KHDC1-205ENST00000484801 CSRNP3Q8WYN3 585 aa20.62■□□□□ 0.89
KHDC1-205ENST00000484801 CUX2O14529 1486 aa20.54■□□□□ 0.88
KHDC1-205ENST00000484801 NESP48681 1621 aa20.53■□□□□ 0.88
KHDC1-205ENST00000484801 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
KHDC1-205ENST00000484801 CEP162Q5TB80 1403 aa20.42■□□□□ 0.86
KHDC1-205ENST00000484801 TOP2AP11388 1531 aaKnown RBP20.42■□□□□ 0.86
KHDC1-205ENST00000484801 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
KHDC1-205ENST00000484801 PRKCSHP14314 528 aaPredicted RBP20.41■□□□□ 0.86
KHDC1-205ENST00000484801 DNAJC5Q9H3Z4 198 aa20.36■□□□□ 0.85
KHDC1-205ENST00000484801 THOC2Q8NI27 1593 aaKnown RBP20.32■□□□□ 0.84
KHDC1-205ENST00000484801 CADPSQ9ULU8 1353 aa20.32■□□□□ 0.84
KHDC1-205ENST00000484801 TNIKQ9UKE5 1360 aa20.31■□□□□ 0.84
KHDC1-205ENST00000484801 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
KHDC1-205ENST00000484801 ERICH6Q7L0X2 663 aa20.28■□□□□ 0.84
KHDC1-205ENST00000484801 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
KHDC1-205ENST00000484801 CCDC88BA6NC98 1476 aa20.21■□□□□ 0.83
KHDC1-205ENST00000484801 RBM19Q9Y4C8 960 aaKnown RBP20.18■□□□□ 0.82
KHDC1-205ENST00000484801 CFTRP13569 1480 aa20.18■□□□□ 0.82
KHDC1-205ENST00000484801 EEA1Q15075 1411 aa20.15■□□□□ 0.82
KHDC1-205ENST00000484801 MYT1LQ9UL68 1186 aa20.14■□□□□ 0.81
KHDC1-205ENST00000484801 HNRNPUL2Q1KMD3 747 aaKnown RBP20.11■□□□□ 0.81
KHDC1-205ENST00000484801 FANCD2Q9BXW9 1451 aa20.09■□□□□ 0.81
KHDC1-205ENST00000484801 MRC2Q9UBG0 1479 aa20.09■□□□□ 0.81
KHDC1-205ENST00000484801 CEP164Q9UPV0 1460 aa20.08■□□□□ 0.8
KHDC1-205ENST00000484801 WDR62O43379 1518 aa20.05■□□□□ 0.8
KHDC1-205ENST00000484801 FKBP8Q14318 412 aa20.04■□□□□ 0.8
KHDC1-205ENST00000484801 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
KHDC1-205ENST00000484801 BCANQ96GW7 911 aa20.03■□□□□ 0.8
KHDC1-205ENST00000484801 NEFLP07196 543 aa20.02■□□□□ 0.8
KHDC1-205ENST00000484801 ABCC8Q09428 1581 aa20.02■□□□□ 0.79
KHDC1-205ENST00000484801 FANCIQ9NVI1 1328 aa20.01■□□□□ 0.79
KHDC1-205ENST00000484801 PRDM2Q13029 1718 aa20.01■□□□□ 0.79
KHDC1-205ENST00000484801 MSH5O43196 834 aa19.96■□□□□ 0.79
KHDC1-205ENST00000484801 DHX57Q6P158 1386 aaKnown RBP19.96■□□□□ 0.79
KHDC1-205ENST00000484801 UBTFP17480 764 aaKnown RBP19.95■□□□□ 0.78
KHDC1-205ENST00000484801 SOGA1O94964 1423 aa19.94■□□□□ 0.78
KHDC1-205ENST00000484801 URB2Q14146 1524 aaKnown RBP19.93■□□□□ 0.78
KHDC1-205ENST00000484801 APLP2Q06481 763 aa19.9■□□□□ 0.78
KHDC1-205ENST00000484801 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
KHDC1-205ENST00000484801 KIF21BO75037 1637 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms