RNA–Protein interactions for RNA: ENST00000483930.1

CTSS-205, Transcript of cathepsin S, humanhuman

TSL 5

Gene CTSS, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-205ENST00000483930 ARAP1Q96P48 1450 aa19.44■□□□□ 0.7
CTSS-205ENST00000483930 TRHP20396 242 aaPredicted RBP19.43■□□□□ 0.7
CTSS-205ENST00000483930 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
CTSS-205ENST00000483930 NPM3O75607 178 aaKnown RBP19.39■□□□□ 0.69
CTSS-205ENST00000483930 SYNJ2O15056 1496 aa19.39■□□□□ 0.69
CTSS-205ENST00000483930 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.69
CTSS-205ENST00000483930 CLASP1Q7Z460 1538 aa19.38■□□□□ 0.69
CTSS-205ENST00000483930 PBRM1Q86U86 1689 aa19.35■□□□□ 0.69
CTSS-205ENST00000483930 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
CTSS-205ENST00000483930 WRNQ14191 1432 aaPredicted RBP eCLIP19.3■□□□□ 0.68
CTSS-205ENST00000483930 ABCA5Q8WWZ7 1642 aa19.29■□□□□ 0.68
CTSS-205ENST00000483930 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
CTSS-205ENST00000483930 BIVM-ERCC5R4GMW8 1640 aa19.21■□□□□ 0.67
CTSS-205ENST00000483930 GRIN2AQ12879 1464 aa19.19■□□□□ 0.66
CTSS-205ENST00000483930 FHAD1B1AJZ9 1412 aa19.14■□□□□ 0.65
CTSS-205ENST00000483930 ADAMTS12P58397 1594 aa19.14■□□□□ 0.65
CTSS-205ENST00000483930 NUP160Q12769 1436 aa19.12■□□□□ 0.65
CTSS-205ENST00000483930 CEP170Q5SW79 1584 aa19.1■□□□□ 0.65
CTSS-205ENST00000483930 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
CTSS-205ENST00000483930 ERCC6L2Q5T890 1561 aa19.09■□□□□ 0.65
CTSS-205ENST00000483930 JPH4Q96JJ6 628 aa19.03■□□□□ 0.64
CTSS-205ENST00000483930 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
CTSS-205ENST00000483930 U3KPZ7 1027 aaPredicted RBP19.01■□□□□ 0.63
CTSS-205ENST00000483930 PRG4Q92954 1404 aaPredicted RBP18.99■□□□□ 0.63
CTSS-205ENST00000483930 IGF1RP08069 1367 aa18.9■□□□□ 0.62
CTSS-205ENST00000483930 NPM1P06748 294 aaKnown RBP eCLIP18.89■□□□□ 0.61
CTSS-205ENST00000483930 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
CTSS-205ENST00000483930 CAPN15O75808 1086 aa18.87■□□□□ 0.61
CTSS-205ENST00000483930 RUSC2Q8N2Y8 1516 aa18.85■□□□□ 0.61
CTSS-205ENST00000483930 SPINK5Q9NQ38 1064 aaPredicted RBP18.84■□□□□ 0.61
CTSS-205ENST00000483930 KIAA0586Q9BVV6 1533 aa18.83■□□□□ 0.6
CTSS-205ENST00000483930 DSG3P32926 999 aa18.82■□□□□ 0.6
CTSS-205ENST00000483930 CUL7Q14999 1698 aa18.82■□□□□ 0.6
CTSS-205ENST00000483930 KIF13AQ9H1H9 1805 aa18.81■□□□□ 0.6
CTSS-205ENST00000483930 FAM69CQ0P6D2 419 aa18.79■□□□□ 0.6
CTSS-205ENST00000483930 CARMIL1Q5VZK9 1371 aa18.78■□□□□ 0.6
CTSS-205ENST00000483930 ABCC10Q5T3U5 1492 aa18.73■□□□□ 0.59
CTSS-205ENST00000483930 ADCY10Q96PN6 1610 aa18.73■□□□□ 0.59
CTSS-205ENST00000483930 MAPKBP1O60336 1514 aa18.71■□□□□ 0.59
CTSS-205ENST00000483930 PTPRGP23470 1445 aa18.7■□□□□ 0.58
CTSS-205ENST00000483930 TTBK1Q5TCY1 1321 aaPredicted RBP18.7■□□□□ 0.58
CTSS-205ENST00000483930 CARMIL2Q6F5E8 1435 aa18.68■□□□□ 0.58
CTSS-205ENST00000483930 KCNA4P22459 653 aa18.68■□□□□ 0.58
CTSS-205ENST00000483930 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
CTSS-205ENST00000483930 DIP2BQ9P265 1576 aa18.64■□□□□ 0.58
CTSS-205ENST00000483930 IQGAP2Q13576 1575 aa18.62■□□□□ 0.57
CTSS-205ENST00000483930 TSPOAP1O95153 1857 aa18.6■□□□□ 0.57
CTSS-205ENST00000483930 SLC4A2P04920 1241 aa18.59■□□□□ 0.57
CTSS-205ENST00000483930 POTEHQ6S545 545 aa18.59■□□□□ 0.57
CTSS-205ENST00000483930 RAPGEF2Q9Y4G8 1499 aa18.58■□□□□ 0.56
CTSS-205ENST00000483930 ABCC2Q92887 1545 aa18.56■□□□□ 0.56
CTSS-205ENST00000483930 APLP2Q06481 763 aa18.56■□□□□ 0.56
CTSS-205ENST00000483930 KDM6BO15054 1643 aa18.53■□□□□ 0.56
CTSS-205ENST00000483930 UACAQ9BZF9 1416 aa18.53■□□□□ 0.56
CTSS-205ENST00000483930 DISP1Q96F81 1524 aa18.53■□□□□ 0.56
CTSS-205ENST00000483930 PLB1Q6P1J6 1458 aa18.52■□□□□ 0.56
CTSS-205ENST00000483930 UHRF1BP1LA0JNW5 1464 aa18.52■□□□□ 0.55
CTSS-205ENST00000483930 ASXL2Q76L83 1435 aa18.51■□□□□ 0.55
CTSS-205ENST00000483930 UGGT2Q9NYU1 1516 aa18.49■□□□□ 0.55
CTSS-205ENST00000483930 ZNF219Q9P2Y4 722 aaPredicted RBP18.46■□□□□ 0.55
CTSS-205ENST00000483930 GLI2P10070 1586 aa18.45■□□□□ 0.54
CTSS-205ENST00000483930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.44■□□□□ 0.54
CTSS-205ENST00000483930 HNRNPUL2Q1KMD3 747 aaKnown RBP18.44■□□□□ 0.54
CTSS-205ENST00000483930 KDM5BQ9UGL1 1544 aa18.44■□□□□ 0.54
CTSS-205ENST00000483930 KIAA0556O60303 1618 aa18.43■□□□□ 0.54
CTSS-205ENST00000483930 KDM4FA0A1W2PPD8 638 aa18.42■□□□□ 0.54
CTSS-205ENST00000483930 CTTNBP2Q8WZ74 1663 aa18.4■□□□□ 0.54
CTSS-205ENST00000483930 EPRSP07814 1512 aaKnown RBP18.39■□□□□ 0.54
CTSS-205ENST00000483930 ZCCHC11Q5TAX3 1644 aaKnown RBP18.39■□□□□ 0.53
CTSS-205ENST00000483930 PPRC1Q5VV67 1664 aaKnown RBP18.39■□□□□ 0.53
CTSS-205ENST00000483930 GOLGA3Q08378 1498 aa18.38■□□□□ 0.53
CTSS-205ENST00000483930 ABCB7O75027 752 aa18.37■□□□□ 0.53
CTSS-205ENST00000483930 FAM9AQ8IZU1 332 aaPredicted RBP18.35■□□□□ 0.53
CTSS-205ENST00000483930 PRXQ9BXM0 1461 aa18.34■□□□□ 0.53
CTSS-205ENST00000483930 MAP3K4Q9Y6R4 1608 aa18.34■□□□□ 0.53
CTSS-205ENST00000483930 TEX14Q8IWB6 1497 aa18.33■□□□□ 0.53
CTSS-205ENST00000483930 KCNH8Q96L42 1107 aa18.32■□□□□ 0.52
CTSS-205ENST00000483930 WDR7Q9Y4E6 1490 aa18.31■□□□□ 0.52
CTSS-205ENST00000483930 COL17A1Q9UMD9 1497 aaPredicted RBP18.3■□□□□ 0.52
CTSS-205ENST00000483930 SAMD1Q6SPF0 538 aaPredicted RBP18.29■□□□□ 0.52
CTSS-205ENST00000483930 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
CTSS-205ENST00000483930 ABCA8O94911 1581 aa18.27■□□□□ 0.52
CTSS-205ENST00000483930 P3H3Q8IVL6 736 aa18.27■□□□□ 0.52
CTSS-205ENST00000483930 CD109Q6YHK3 1445 aa18.25■□□□□ 0.51
CTSS-205ENST00000483930 CFAP43Q8NDM7 1665 aa18.22■□□□□ 0.51
CTSS-205ENST00000483930 ARID3CA6NKF2 412 aa18.21■□□□□ 0.51
CTSS-205ENST00000483930 ADGRL1O94910 1474 aa18.2■□□□□ 0.5
CTSS-205ENST00000483930 MAGI3Q5TCQ9 1506 aa18.2■□□□□ 0.5
CTSS-205ENST00000483930 ATP10BO94823 1461 aa18.17■□□□□ 0.5
CTSS-205ENST00000483930 RANGAP1P46060 587 aaPredicted RBP18.13■□□□□ 0.49
CTSS-205ENST00000483930 EEA1Q15075 1411 aa18.13■□□□□ 0.49
CTSS-205ENST00000483930 SAMD9Q5K651 1589 aa18.11■□□□□ 0.49
CTSS-205ENST00000483930 RAPGEF6Q8TEU7 1601 aa18.09■□□□□ 0.49
CTSS-205ENST00000483930 PHLDB1Q86UU1 1377 aa18.07■□□□□ 0.48
CTSS-205ENST00000483930 ARAP3Q8WWN8 1544 aa18.07■□□□□ 0.48
CTSS-205ENST00000483930 ABCA9Q8IUA7 1624 aa18.05■□□□□ 0.48
CTSS-205ENST00000483930 PLEKHD1A6NEE1 506 aa18.04■□□□□ 0.48
CTSS-205ENST00000483930 RBM42Q9BTD8 480 aaKnown RBP18.03■□□□□ 0.48
CTSS-205ENST00000483930 FHOD3Q2V2M9 1422 aa18.01■□□□□ 0.47
CTSS-205ENST00000483930 RAPGEF3O95398 923 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms