RNA–Protein interactions for RNA: ENST00000483890.1

SEC23IP-207, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 457 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-207ENST00000483890 RTN4Q9NQC3 1192 aaKnown RBP12.66□□□□□ -0.38
SEC23IP-207ENST00000483890 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
SEC23IP-207ENST00000483890 AMER1Q5JTC6 1135 aaPredicted RBP12.65□□□□□ -0.38
SEC23IP-207ENST00000483890 TOP2AP11388 1531 aaKnown RBP12.63□□□□□ -0.39
SEC23IP-207ENST00000483890 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
SEC23IP-207ENST00000483890 GABBR2O75899 941 aa12.57□□□□□ -0.4
SEC23IP-207ENST00000483890 PRDM2Q13029 1718 aa12.57□□□□□ -0.4
SEC23IP-207ENST00000483890 LAMC3Q9Y6N6 1575 aa12.53□□□□□ -0.4
SEC23IP-207ENST00000483890 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
SEC23IP-207ENST00000483890 KIF21AQ7Z4S6 1674 aa12.48□□□□□ -0.41
SEC23IP-207ENST00000483890 NESP48681 1621 aa12.45□□□□□ -0.42
SEC23IP-207ENST00000483890 FKBP8Q14318 412 aa12.45□□□□□ -0.42
SEC23IP-207ENST00000483890 LHX8Q68G74 356 aa12.44□□□□□ -0.42
SEC23IP-207ENST00000483890 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.42
SEC23IP-207ENST00000483890 ERCC6Q03468 1493 aa12.4□□□□□ -0.42
SEC23IP-207ENST00000483890 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
SEC23IP-207ENST00000483890 CFTRP13569 1480 aa12.37□□□□□ -0.43
SEC23IP-207ENST00000483890 SUPT5HO00267 1087 aaKnown RBP12.36□□□□□ -0.43
SEC23IP-207ENST00000483890 PDS5BQ9NTI5 1447 aa12.36□□□□□ -0.43
SEC23IP-207ENST00000483890 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
SEC23IP-207ENST00000483890 CD44P16070 742 aaKnown RBP12.34□□□□□ -0.43
SEC23IP-207ENST00000483890 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
SEC23IP-207ENST00000483890 FARP1Q9Y4F1 1045 aaPredicted RBP12.32□□□□□ -0.44
SEC23IP-207ENST00000483890 FANCD2Q9BXW9 1451 aa12.29□□□□□ -0.44
SEC23IP-207ENST00000483890 CEP164Q9UPV0 1460 aa12.29□□□□□ -0.44
SEC23IP-207ENST00000483890 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
SEC23IP-207ENST00000483890 PROM2Q8N271 834 aa12.28□□□□□ -0.44
SEC23IP-207ENST00000483890 CUX2O14529 1486 aa12.27□□□□□ -0.45
SEC23IP-207ENST00000483890 MRC2Q9UBG0 1479 aa12.26□□□□□ -0.45
SEC23IP-207ENST00000483890 WDR62O43379 1518 aa12.24□□□□□ -0.45
SEC23IP-207ENST00000483890 CLCN6P51797 869 aa12.17□□□□□ -0.46
SEC23IP-207ENST00000483890 URB2Q14146 1524 aaKnown RBP12.16□□□□□ -0.46
SEC23IP-207ENST00000483890 DNMBPQ6XZF7 1577 aa12.16□□□□□ -0.46
SEC23IP-207ENST00000483890 ABCC8Q09428 1581 aa12.14□□□□□ -0.47
SEC23IP-207ENST00000483890 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
SEC23IP-207ENST00000483890 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
SEC23IP-207ENST00000483890 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
SEC23IP-207ENST00000483890 TOPBP1Q92547 1522 aa12.11□□□□□ -0.47
SEC23IP-207ENST00000483890 CREBZFQ9NS37 354 aa12.11□□□□□ -0.47
SEC23IP-207ENST00000483890 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
SEC23IP-207ENST00000483890 CUX1P39880 1505 aa12.06□□□□□ -0.48
SEC23IP-207ENST00000483890 WDR97A6NE52 1622 aa12.04□□□□□ -0.48
SEC23IP-207ENST00000483890 TOP2BQ02880 1626 aa12.04□□□□□ -0.48
SEC23IP-207ENST00000483890 GALR2O43603 387 aaPredicted RBP12.03□□□□□ -0.48
SEC23IP-207ENST00000483890 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
SEC23IP-207ENST00000483890 TARBP1Q13395 1621 aaKnown RBP12.03□□□□□ -0.48
SEC23IP-207ENST00000483890 IFT140Q96RY7 1462 aa12.02□□□□□ -0.49
SEC23IP-207ENST00000483890 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
SEC23IP-207ENST00000483890 POLA1P09884 1462 aaPredicted RBP12.01□□□□□ -0.49
SEC23IP-207ENST00000483890 SYNJ1O43426 1573 aa12.01□□□□□ -0.49
SEC23IP-207ENST00000483890 FGD5Q6ZNL6 1462 aa12□□□□□ -0.49
SEC23IP-207ENST00000483890 EIF4G3O43432 1585 aaKnown RBP11.99□□□□□ -0.49
SEC23IP-207ENST00000483890 WRNQ14191 1432 aaPredicted RBP eCLIP11.98□□□□□ -0.49
SEC23IP-207ENST00000483890 PBRM1Q86U86 1689 aa11.97□□□□□ -0.49
SEC23IP-207ENST00000483890 PLSCR2Q9NRY7 297 aa11.95□□□□□ -0.5
SEC23IP-207ENST00000483890 PHF12Q96QT6 1004 aa11.94□□□□□ -0.5
SEC23IP-207ENST00000483890 ZNF608Q9ULD9 1512 aaPredicted RBP11.92□□□□□ -0.5
SEC23IP-207ENST00000483890 RAD54L2Q9Y4B4 1467 aa11.92□□□□□ -0.5
SEC23IP-207ENST00000483890 POTEB2H3BUK9 544 aa11.92□□□□□ -0.5
SEC23IP-207ENST00000483890 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
SEC23IP-207ENST00000483890 SOGA1O94964 1423 aa11.92□□□□□ -0.5
SEC23IP-207ENST00000483890 ABCA5Q8WWZ7 1642 aa11.9□□□□□ -0.5
SEC23IP-207ENST00000483890 CHD1O14646 1710 aa11.9□□□□□ -0.5
SEC23IP-207ENST00000483890 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
SEC23IP-207ENST00000483890 ABCA10Q8WWZ4 1543 aa11.89□□□□□ -0.51
SEC23IP-207ENST00000483890 MNX1P50219 401 aaPredicted RBP11.86□□□□□ -0.51
SEC23IP-207ENST00000483890 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
SEC23IP-207ENST00000483890 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
SEC23IP-207ENST00000483890 AQRO60306 1485 aaKnown RBP eCLIP11.84□□□□□ -0.51
SEC23IP-207ENST00000483890 NPM1P06748 294 aaKnown RBP eCLIP11.84□□□□□ -0.51
SEC23IP-207ENST00000483890 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
SEC23IP-207ENST00000483890 TDRD9Q8NDG6 1382 aaKnown RBP11.81□□□□□ -0.52
SEC23IP-207ENST00000483890 GRIN2BQ13224 1484 aa11.81□□□□□ -0.52
SEC23IP-207ENST00000483890 MAGI1Q96QZ7 1491 aaPredicted RBP11.8□□□□□ -0.52
SEC23IP-207ENST00000483890 ERICH3Q5RHP9 1530 aa11.79□□□□□ -0.52
SEC23IP-207ENST00000483890 SNAPC4Q5SXM2 1469 aa11.78□□□□□ -0.52
SEC23IP-207ENST00000483890 ADAMTS12P58397 1594 aa11.78□□□□□ -0.52
SEC23IP-207ENST00000483890 CUL7Q14999 1698 aa11.77□□□□□ -0.53
SEC23IP-207ENST00000483890 MS4A3Q96HJ5 214 aa11.76□□□□□ -0.53
SEC23IP-207ENST00000483890 POTEMA6NI47 508 aa11.74□□□□□ -0.53
SEC23IP-207ENST00000483890 SYNJ2O15056 1496 aa11.74□□□□□ -0.53
SEC23IP-207ENST00000483890 ASTLQ6HA08 431 aaPredicted RBP11.73□□□□□ -0.53
SEC23IP-207ENST00000483890 KIF27Q86VH2 1401 aa11.72□□□□□ -0.53
SEC23IP-207ENST00000483890 METRNQ9UJH8 293 aa11.72□□□□□ -0.53
SEC23IP-207ENST00000483890 ATMINO43313 823 aaPredicted RBP11.71□□□□□ -0.53
SEC23IP-207ENST00000483890 IFNLR1Q8IU57 520 aaPredicted RBP11.71□□□□□ -0.53
SEC23IP-207ENST00000483890 POTEGQ6S5H5 508 aa11.7□□□□□ -0.54
SEC23IP-207ENST00000483890 POTEJP0CG39 1038 aa11.69□□□□□ -0.54
SEC23IP-207ENST00000483890 TRIM41Q8WV44 630 aa11.68□□□□□ -0.54
SEC23IP-207ENST00000483890 DNAJC5Q9H3Z4 198 aa11.68□□□□□ -0.54
SEC23IP-207ENST00000483890 FHAD1B1AJZ9 1412 aa11.68□□□□□ -0.54
SEC23IP-207ENST00000483890 GRIN2AQ12879 1464 aa11.67□□□□□ -0.54
SEC23IP-207ENST00000483890 CLASP1Q7Z460 1538 aa11.66□□□□□ -0.54
SEC23IP-207ENST00000483890 C7P10643 843 aa11.66□□□□□ -0.54
SEC23IP-207ENST00000483890 SLC39A7Q92504 469 aa11.66□□□□□ -0.54
SEC23IP-207ENST00000483890 TSPYL2Q9H2G4 693 aaPredicted RBP11.66□□□□□ -0.54
SEC23IP-207ENST00000483890 PLCB2Q00722 1185 aa11.65□□□□□ -0.54
SEC23IP-207ENST00000483890 CHMP7Q8WUX9 453 aaPredicted RBP11.65□□□□□ -0.54
SEC23IP-207ENST00000483890 CEP170Q5SW79 1584 aa11.64□□□□□ -0.55
SEC23IP-207ENST00000483890 CTTNBP2Q8WZ74 1663 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms