RNA–Protein interactions for RNA: ENST00000483890.1

SEC23IP-207, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 457 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-207ENST00000483890 AEBP2Q6ZN18 517 aaPredicted RBP24.23■■□□□ 1.47
SEC23IP-207ENST00000483890 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
SEC23IP-207ENST00000483890 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
SEC23IP-207ENST00000483890 PHF23Q9BUL5 403 aaPredicted RBP20.38■□□□□ 0.85
SEC23IP-207ENST00000483890 FOXD1Q16676 465 aa19.34■□□□□ 0.69
SEC23IP-207ENST00000483890 POTEDQ86YR6 584 aa18.38■□□□□ 0.53
SEC23IP-207ENST00000483890 MSH5O43196 834 aa18.17■□□□□ 0.5
SEC23IP-207ENST00000483890 PIAS4Q8N2W9 510 aaPredicted RBP17.97■□□□□ 0.47
SEC23IP-207ENST00000483890 PLPPR3Q6T4P5 718 aa17.9■□□□□ 0.46
SEC23IP-207ENST00000483890 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
SEC23IP-207ENST00000483890 ADRA2BP18089 450 aa17.76■□□□□ 0.43
SEC23IP-207ENST00000483890 NISCHQ9Y2I1 1504 aa16.68■□□□□ 0.26
SEC23IP-207ENST00000483890 MAPK8IP2Q13387 824 aaPredicted RBP16.43■□□□□ 0.22
SEC23IP-207ENST00000483890 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
SEC23IP-207ENST00000483890 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
SEC23IP-207ENST00000483890 CACNB1Q02641 598 aaPredicted RBP15.85■□□□□ 0.13
SEC23IP-207ENST00000483890 DCAF8L1A6NGE4 600 aa15.71■□□□□ 0.11
SEC23IP-207ENST00000483890 PPP4R3CPQ6ZMV5 832 aa15.67■□□□□ 0.1
SEC23IP-207ENST00000483890 HOXD11P31277 338 aaPredicted RBP15.59■□□□□ 0.09
SEC23IP-207ENST00000483890 RNF39Q9H2S5 420 aa15.51■□□□□ 0.07
SEC23IP-207ENST00000483890 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
SEC23IP-207ENST00000483890 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
SEC23IP-207ENST00000483890 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
SEC23IP-207ENST00000483890 DNAJC5BQ9UF47 199 aa15.08■□□□□ 0
SEC23IP-207ENST00000483890 KCNA4P22459 653 aa14.96□□□□□ -0.01
SEC23IP-207ENST00000483890 CCDC180Q9P1Z9 1646 aa14.95□□□□□ -0.02
SEC23IP-207ENST00000483890 NCBP3Q53F19 620 aaKnown RBP14.92□□□□□ -0.02
SEC23IP-207ENST00000483890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.03
SEC23IP-207ENST00000483890 NPM3O75607 178 aaKnown RBP14.75□□□□□ -0.05
SEC23IP-207ENST00000483890 U3KPZ7 1027 aaPredicted RBP14.53□□□□□ -0.08
SEC23IP-207ENST00000483890 SPINK5Q9NQ38 1064 aaPredicted RBP14.45□□□□□ -0.1
SEC23IP-207ENST00000483890 DSG3P32926 999 aa14.42□□□□□ -0.1
SEC23IP-207ENST00000483890 CAPN15O75808 1086 aa14.41□□□□□ -0.1
SEC23IP-207ENST00000483890 ABCC9O60706 1549 aa14.36□□□□□ -0.11
SEC23IP-207ENST00000483890 POTEHQ6S545 545 aa14.33□□□□□ -0.12
SEC23IP-207ENST00000483890 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
SEC23IP-207ENST00000483890 SLC4A1APQ9BWU0 796 aaKnown RBP14.26□□□□□ -0.13
SEC23IP-207ENST00000483890 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
SEC23IP-207ENST00000483890 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
SEC23IP-207ENST00000483890 ABCB7O75027 752 aa14.07□□□□□ -0.16
SEC23IP-207ENST00000483890 ZNF219Q9P2Y4 722 aaPredicted RBP14.03□□□□□ -0.16
SEC23IP-207ENST00000483890 APLP2Q06481 763 aa14.01□□□□□ -0.17
SEC23IP-207ENST00000483890 RB1CC1Q8TDY2 1594 aa13.95□□□□□ -0.18
SEC23IP-207ENST00000483890 NACADO15069 1562 aa13.94□□□□□ -0.18
SEC23IP-207ENST00000483890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
SEC23IP-207ENST00000483890 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
SEC23IP-207ENST00000483890 ZCCHC6Q5VYS8 1495 aaKnown RBP13.93□□□□□ -0.18
SEC23IP-207ENST00000483890 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
SEC23IP-207ENST00000483890 MYO15BQ96JP2 1530 aa13.87□□□□□ -0.19
SEC23IP-207ENST00000483890 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
SEC23IP-207ENST00000483890 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
SEC23IP-207ENST00000483890 ZBTB22O15209 634 aa13.81□□□□□ -0.2
SEC23IP-207ENST00000483890 UNC13AQ9UPW8 1703 aa13.79□□□□□ -0.2
SEC23IP-207ENST00000483890 DCAF8L2P0C7V8 631 aa13.76□□□□□ -0.21
SEC23IP-207ENST00000483890 FOXD4L1Q9NU39 408 aa13.74□□□□□ -0.21
SEC23IP-207ENST00000483890 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
SEC23IP-207ENST00000483890 POLA2Q14181 598 aa13.64□□□□□ -0.23
SEC23IP-207ENST00000483890 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
SEC23IP-207ENST00000483890 CHRDL2Q6WN34 429 aa13.59□□□□□ -0.23
SEC23IP-207ENST00000483890 SCRIBQ14160 1630 aa13.56□□□□□ -0.24
SEC23IP-207ENST00000483890 BICRAQ9NZM4 1560 aa13.49□□□□□ -0.25
SEC23IP-207ENST00000483890 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
SEC23IP-207ENST00000483890 SHROOM4Q9ULL8 1493 aa13.39□□□□□ -0.27
SEC23IP-207ENST00000483890 PABPN1Q86U42 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
SEC23IP-207ENST00000483890 AKT1S1Q96B36 256 aa13.34□□□□□ -0.27
SEC23IP-207ENST00000483890 ATXN8OSP0DMR3 200 aa13.31□□□□□ -0.28
SEC23IP-207ENST00000483890 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
SEC23IP-207ENST00000483890 SP7Q8TDD2 431 aaPredicted RBP13.26□□□□□ -0.29
SEC23IP-207ENST00000483890 REM2Q8IYK8 340 aaPredicted RBP13.25□□□□□ -0.29
SEC23IP-207ENST00000483890 OSCARQ8IYS5 282 aa13.24□□□□□ -0.29
SEC23IP-207ENST00000483890 PIP4P2Q8N4L2 257 aa13.21□□□□□ -0.29
SEC23IP-207ENST00000483890 EIF4G1Q04637 1599 aaKnown RBP13.14□□□□□ -0.31
SEC23IP-207ENST00000483890 PITPNM1O00562 1244 aa13.11□□□□□ -0.31
SEC23IP-207ENST00000483890 CC2D2AQ9P2K1 1620 aa13.07□□□□□ -0.32
SEC23IP-207ENST00000483890 HAX1O00165 279 aa13.07□□□□□ -0.32
SEC23IP-207ENST00000483890 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.32
SEC23IP-207ENST00000483890 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
SEC23IP-207ENST00000483890 BAZ1AQ9NRL2 1556 aaPredicted RBP12.96□□□□□ -0.33
SEC23IP-207ENST00000483890 CECR2Q9BXF3 1484 aa12.93□□□□□ -0.34
SEC23IP-207ENST00000483890 EVX2Q03828 476 aa12.91□□□□□ -0.34
SEC23IP-207ENST00000483890 SMARCA2P51531 1590 aa12.87□□□□□ -0.35
SEC23IP-207ENST00000483890 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
SEC23IP-207ENST00000483890 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
SEC23IP-207ENST00000483890 SPDYE2Q495Y8 402 aa12.87□□□□□ -0.35
SEC23IP-207ENST00000483890 PEG3Q9GZU2 1588 aa12.86□□□□□ -0.35
SEC23IP-207ENST00000483890 MROH2BQ7Z745 1585 aa12.83□□□□□ -0.36
SEC23IP-207ENST00000483890 FBLN2P98095 1184 aa12.83□□□□□ -0.36
SEC23IP-207ENST00000483890 HMGXB3Q12766 1538 aa12.82□□□□□ -0.36
SEC23IP-207ENST00000483890 ATAD2BQ9ULI0 1458 aa12.8□□□□□ -0.36
SEC23IP-207ENST00000483890 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
SEC23IP-207ENST00000483890 WIZO95785 1651 aa12.78□□□□□ -0.36
SEC23IP-207ENST00000483890 PRKAR2AP13861 404 aaKnown RBP12.77□□□□□ -0.37
SEC23IP-207ENST00000483890 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
SEC23IP-207ENST00000483890 MKRN4PQ13434 485 aaPredicted RBP12.75□□□□□ -0.37
SEC23IP-207ENST00000483890 BAZ1BQ9UIG0 1483 aaKnown RBP12.74□□□□□ -0.37
SEC23IP-207ENST00000483890 SPDYE1Q8NFV5 336 aaPredicted RBP12.73□□□□□ -0.37
SEC23IP-207ENST00000483890 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
SEC23IP-207ENST00000483890 SLC24A1O60721 1099 aa12.68□□□□□ -0.38
SEC23IP-207ENST00000483890 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
SEC23IP-207ENST00000483890 RSF1Q96T23 1441 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms