RNA–Protein interactions for RNA: ENST00000483662.2

CTTN-207, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-207ENST00000483662 ABCC8Q09428 1581 aa12.48□□□□□ -0.41
CTTN-207ENST00000483662 TDRD9Q8NDG6 1382 aaKnown RBP12.48□□□□□ -0.41
CTTN-207ENST00000483662 FGD5Q6ZNL6 1462 aa12.47□□□□□ -0.41
CTTN-207ENST00000483662 APLP2Q06481 763 aa12.47□□□□□ -0.41
CTTN-207ENST00000483662 SOGA1O94964 1423 aa12.45□□□□□ -0.42
CTTN-207ENST00000483662 RNF39Q9H2S5 420 aa12.44□□□□□ -0.42
CTTN-207ENST00000483662 WDR97A6NE52 1622 aa12.44□□□□□ -0.42
CTTN-207ENST00000483662 SUPT5HO00267 1087 aaKnown RBP12.42□□□□□ -0.42
CTTN-207ENST00000483662 FBLN2P98095 1184 aa12.41□□□□□ -0.42
CTTN-207ENST00000483662 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.42
CTTN-207ENST00000483662 ARAP1Q96P48 1450 aa12.4□□□□□ -0.42
CTTN-207ENST00000483662 CYB5RLQ6IPT4 315 aa12.39□□□□□ -0.43
CTTN-207ENST00000483662 ZNF219Q9P2Y4 722 aaPredicted RBP12.39□□□□□ -0.43
CTTN-207ENST00000483662 PBRM1Q86U86 1689 aa12.37□□□□□ -0.43
CTTN-207ENST00000483662 CLASP1Q7Z460 1538 aa12.37□□□□□ -0.43
CTTN-207ENST00000483662 FKBP8Q14318 412 aa12.34□□□□□ -0.43
CTTN-207ENST00000483662 ABCA5Q8WWZ7 1642 aa12.33□□□□□ -0.44
CTTN-207ENST00000483662 SYNJ1O43426 1573 aa12.31□□□□□ -0.44
CTTN-207ENST00000483662 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
CTTN-207ENST00000483662 GRIN2BQ13224 1484 aa12.3□□□□□ -0.44
CTTN-207ENST00000483662 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
CTTN-207ENST00000483662 ERCC6L2Q5T890 1561 aa12.3□□□□□ -0.44
CTTN-207ENST00000483662 GAPVD1Q14C86 1478 aa12.29□□□□□ -0.44
CTTN-207ENST00000483662 MAGI1Q96QZ7 1491 aaPredicted RBP12.28□□□□□ -0.44
CTTN-207ENST00000483662 ABCA10Q8WWZ4 1543 aa12.28□□□□□ -0.44
CTTN-207ENST00000483662 SYNJ2O15056 1496 aa12.27□□□□□ -0.44
CTTN-207ENST00000483662 CHMP7Q8WUX9 453 aaPredicted RBP12.27□□□□□ -0.45
CTTN-207ENST00000483662 BIVM-ERCC5R4GMW8 1640 aa12.26□□□□□ -0.45
CTTN-207ENST00000483662 TRHP20396 242 aaPredicted RBP12.24□□□□□ -0.45
CTTN-207ENST00000483662 TOP2BQ02880 1626 aa12.24□□□□□ -0.45
CTTN-207ENST00000483662 CEP170Q5SW79 1584 aa12.23□□□□□ -0.45
CTTN-207ENST00000483662 ADAMTS12P58397 1594 aa12.22□□□□□ -0.45
CTTN-207ENST00000483662 CAPN15O75808 1086 aa12.21□□□□□ -0.45
CTTN-207ENST00000483662 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.46
CTTN-207ENST00000483662 GRIN2AQ12879 1464 aa12.19□□□□□ -0.46
CTTN-207ENST00000483662 NUP160Q12769 1436 aa12.15□□□□□ -0.46
CTTN-207ENST00000483662 SHROOM2Q13796 1616 aa12.15□□□□□ -0.47
CTTN-207ENST00000483662 POLA2Q14181 598 aa12.14□□□□□ -0.47
CTTN-207ENST00000483662 MKRN4PQ13434 485 aaPredicted RBP12.12□□□□□ -0.47
CTTN-207ENST00000483662 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
CTTN-207ENST00000483662 ERICH3Q5RHP9 1530 aa12.09□□□□□ -0.47
CTTN-207ENST00000483662 KIF13AQ9H1H9 1805 aa12.06□□□□□ -0.48
CTTN-207ENST00000483662 RUSC2Q8N2Y8 1516 aa12.05□□□□□ -0.48
CTTN-207ENST00000483662 PRG4Q92954 1404 aaPredicted RBP12.03□□□□□ -0.48
CTTN-207ENST00000483662 ABCB7O75027 752 aa12.02□□□□□ -0.49
CTTN-207ENST00000483662 IGF1RP08069 1367 aa12.01□□□□□ -0.49
CTTN-207ENST00000483662 JPH4Q96JJ6 628 aa12□□□□□ -0.49
CTTN-207ENST00000483662 SPDYE4A6NLX3 237 aa11.99□□□□□ -0.49
CTTN-207ENST00000483662 ADCY10Q96PN6 1610 aa11.97□□□□□ -0.49
CTTN-207ENST00000483662 DSG3P32926 999 aa11.96□□□□□ -0.49
CTTN-207ENST00000483662 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
CTTN-207ENST00000483662 CUL7Q14999 1698 aa11.92□□□□□ -0.5
CTTN-207ENST00000483662 KIF27Q86VH2 1401 aa11.92□□□□□ -0.5
CTTN-207ENST00000483662 KIAA0586Q9BVV6 1533 aa11.91□□□□□ -0.5
CTTN-207ENST00000483662 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
CTTN-207ENST00000483662 DIP2BQ9P265 1576 aa11.88□□□□□ -0.51
CTTN-207ENST00000483662 PROM2Q8N271 834 aa11.88□□□□□ -0.51
CTTN-207ENST00000483662 CARMIL1Q5VZK9 1371 aa11.88□□□□□ -0.51
CTTN-207ENST00000483662 TTBK1Q5TCY1 1321 aaPredicted RBP11.87□□□□□ -0.51
CTTN-207ENST00000483662 AMER1Q5JTC6 1135 aaPredicted RBP11.86□□□□□ -0.51
CTTN-207ENST00000483662 ABCC10Q5T3U5 1492 aa11.86□□□□□ -0.51
CTTN-207ENST00000483662 RTN4Q9NQC3 1192 aaKnown RBP11.85□□□□□ -0.51
CTTN-207ENST00000483662 MAPKBP1O60336 1514 aa11.85□□□□□ -0.51
CTTN-207ENST00000483662 FAM69CQ0P6D2 419 aa11.84□□□□□ -0.51
CTTN-207ENST00000483662 DISP1Q96F81 1524 aa11.84□□□□□ -0.51
CTTN-207ENST00000483662 CACNB1Q02641 598 aaPredicted RBP11.83□□□□□ -0.52
CTTN-207ENST00000483662 PPRC1Q5VV67 1664 aaKnown RBP11.82□□□□□ -0.52
CTTN-207ENST00000483662 IQGAP2Q13576 1575 aa11.82□□□□□ -0.52
CTTN-207ENST00000483662 PTPRGP23470 1445 aa11.8□□□□□ -0.52
CTTN-207ENST00000483662 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
CTTN-207ENST00000483662 ABCC2Q92887 1545 aa11.79□□□□□ -0.52
CTTN-207ENST00000483662 TNIKQ9UKE5 1360 aa11.76□□□□□ -0.53
CTTN-207ENST00000483662 RAPGEF2Q9Y4G8 1499 aa11.76□□□□□ -0.53
CTTN-207ENST00000483662 UGGT2Q9NYU1 1516 aa11.75□□□□□ -0.53
CTTN-207ENST00000483662 KIAA0556O60303 1618 aa11.75□□□□□ -0.53
CTTN-207ENST00000483662 NPM1P06748 294 aaKnown RBP eCLIP11.74□□□□□ -0.53
CTTN-207ENST00000483662 ASXL2Q76L83 1435 aa11.74□□□□□ -0.53
CTTN-207ENST00000483662 COL17A1Q9UMD9 1497 aaPredicted RBP11.74□□□□□ -0.53
CTTN-207ENST00000483662 KDM6BO15054 1643 aa11.74□□□□□ -0.53
CTTN-207ENST00000483662 ZCCHC11Q5TAX3 1644 aaKnown RBP11.74□□□□□ -0.53
CTTN-207ENST00000483662 CTTNBP2Q8WZ74 1663 aa11.74□□□□□ -0.53
CTTN-207ENST00000483662 KDM4FA0A1W2PPD8 638 aa11.72□□□□□ -0.53
CTTN-207ENST00000483662 UHRF1BP1LA0JNW5 1464 aa11.71□□□□□ -0.53
CTTN-207ENST00000483662 UACAQ9BZF9 1416 aa11.71□□□□□ -0.53
CTTN-207ENST00000483662 PLB1Q6P1J6 1458 aa11.7□□□□□ -0.54
CTTN-207ENST00000483662 CARMIL2Q6F5E8 1435 aa11.7□□□□□ -0.54
CTTN-207ENST00000483662 KDM5BQ9UGL1 1544 aa11.7□□□□□ -0.54
CTTN-207ENST00000483662 MAP3K4Q9Y6R4 1608 aa11.69□□□□□ -0.54
CTTN-207ENST00000483662 GLI2P10070 1586 aa11.69□□□□□ -0.54
CTTN-207ENST00000483662 PRXQ9BXM0 1461 aa11.69□□□□□ -0.54
CTTN-207ENST00000483662 ZNF692Q9BU19 519 aaPredicted RBP11.68□□□□□ -0.54
CTTN-207ENST00000483662 EPRSP07814 1512 aaKnown RBP11.68□□□□□ -0.54
CTTN-207ENST00000483662 SPDYE2BA6NHP3 402 aa11.67□□□□□ -0.54
CTTN-207ENST00000483662 SPDYE6P0CI01 402 aa11.67□□□□□ -0.54
CTTN-207ENST00000483662 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
CTTN-207ENST00000483662 ABCA8O94911 1581 aa11.66□□□□□ -0.54
CTTN-207ENST00000483662 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
CTTN-207ENST00000483662 ARID3CA6NKF2 412 aa11.63□□□□□ -0.55
CTTN-207ENST00000483662 VASPP50552 380 aaPredicted RBP11.63□□□□□ -0.55
CTTN-207ENST00000483662 P3H3Q8IVL6 736 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms