RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 ABCA10Q8WWZ4 1543 aa22.6■■□□□ 1.21
COL21A1-209ENST00000482933 GAPVD1Q14C86 1478 aa22.58■■□□□ 1.21
COL21A1-209ENST00000482933 CHMP7Q8WUX9 453 aaPredicted RBP22.58■■□□□ 1.21
COL21A1-209ENST00000482933 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.2
COL21A1-209ENST00000482933 TOP2BQ02880 1626 aa22.55■■□□□ 1.2
COL21A1-209ENST00000482933 BIVM-ERCC5R4GMW8 1640 aa22.54■■□□□ 1.2
COL21A1-209ENST00000482933 PBRM1Q86U86 1689 aa22.54■■□□□ 1.2
COL21A1-209ENST00000482933 SYNJ2O15056 1496 aa22.52■■□□□ 1.2
COL21A1-209ENST00000482933 ABCA5Q8WWZ7 1642 aa22.51■■□□□ 1.19
COL21A1-209ENST00000482933 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
COL21A1-209ENST00000482933 CLASP1Q7Z460 1538 aa22.45■■□□□ 1.18
COL21A1-209ENST00000482933 CYB5RLQ6IPT4 315 aa22.44■■□□□ 1.18
COL21A1-209ENST00000482933 U3KPZ7 1027 aaPredicted RBP22.42■■□□□ 1.18
COL21A1-209ENST00000482933 ARAP1Q96P48 1450 aa22.38■■□□□ 1.17
COL21A1-209ENST00000482933 ADAMTS12P58397 1594 aa22.33■■□□□ 1.17
COL21A1-209ENST00000482933 ERICH3Q5RHP9 1530 aa22.33■■□□□ 1.17
COL21A1-209ENST00000482933 GRIN2AQ12879 1464 aa22.33■■□□□ 1.16
COL21A1-209ENST00000482933 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
COL21A1-209ENST00000482933 SLC4A2P04920 1241 aa22.31■■□□□ 1.16
COL21A1-209ENST00000482933 NUP160Q12769 1436 aa22.25■■□□□ 1.15
COL21A1-209ENST00000482933 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
COL21A1-209ENST00000482933 KIF27Q86VH2 1401 aa22.15■■□□□ 1.14
COL21A1-209ENST00000482933 TRHP20396 242 aaPredicted RBP22.14■■□□□ 1.13
COL21A1-209ENST00000482933 SHROOM2Q13796 1616 aa22.11■■□□□ 1.13
COL21A1-209ENST00000482933 IGF1RP08069 1367 aa22.09■■□□□ 1.13
COL21A1-209ENST00000482933 ERCC6L2Q5T890 1561 aa22.08■■□□□ 1.12
COL21A1-209ENST00000482933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.05■■□□□ 1.12
COL21A1-209ENST00000482933 APLP2Q06481 763 aa22.05■■□□□ 1.12
COL21A1-209ENST00000482933 HNRNPUL2Q1KMD3 747 aaKnown RBP22.05■■□□□ 1.12
COL21A1-209ENST00000482933 JPH4Q96JJ6 628 aa22.05■■□□□ 1.12
COL21A1-209ENST00000482933 CUL7Q14999 1698 aa22.05■■□□□ 1.12
COL21A1-209ENST00000482933 PRG4Q92954 1404 aaPredicted RBP22.02■■□□□ 1.11
COL21A1-209ENST00000482933 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
COL21A1-209ENST00000482933 CAPN15O75808 1086 aa22■■□□□ 1.11
COL21A1-209ENST00000482933 SLC4A1APQ9BWU0 796 aaKnown RBP21.99■■□□□ 1.11
COL21A1-209ENST00000482933 SPINK5Q9NQ38 1064 aaPredicted RBP21.97■■□□□ 1.11
COL21A1-209ENST00000482933 CARMIL1Q5VZK9 1371 aa21.96■■□□□ 1.11
COL21A1-209ENST00000482933 KIAA0586Q9BVV6 1533 aa21.96■■□□□ 1.11
COL21A1-209ENST00000482933 SAMD1Q6SPF0 538 aaPredicted RBP21.89■■□□□ 1.09
COL21A1-209ENST00000482933 DSG3P32926 999 aa21.8■■□□□ 1.08
COL21A1-209ENST00000482933 MYCNP04198 464 aaPredicted RBP21.8■■□□□ 1.08
COL21A1-209ENST00000482933 RAPGEF2Q9Y4G8 1499 aa21.79■■□□□ 1.08
COL21A1-209ENST00000482933 NPM1P06748 294 aaKnown RBP eCLIP21.79■■□□□ 1.08
COL21A1-209ENST00000482933 ZNF219Q9P2Y4 722 aaPredicted RBP21.79■■□□□ 1.08
COL21A1-209ENST00000482933 CARMIL2Q6F5E8 1435 aa21.76■■□□□ 1.07
COL21A1-209ENST00000482933 IQGAP2Q13576 1575 aa21.76■■□□□ 1.07
COL21A1-209ENST00000482933 PTPRGP23470 1445 aa21.72■■□□□ 1.07
COL21A1-209ENST00000482933 ADCY10Q96PN6 1610 aa21.71■■□□□ 1.07
COL21A1-209ENST00000482933 TNIKQ9UKE5 1360 aa21.7■■□□□ 1.07
COL21A1-209ENST00000482933 MAPKBP1O60336 1514 aa21.67■■□□□ 1.06
COL21A1-209ENST00000482933 FOXD4L1Q9NU39 408 aa21.66■■□□□ 1.06
COL21A1-209ENST00000482933 KIF13AQ9H1H9 1805 aa21.65■■□□□ 1.06
COL21A1-209ENST00000482933 TTBK1Q5TCY1 1321 aaPredicted RBP21.64■■□□□ 1.06
COL21A1-209ENST00000482933 UGGT2Q9NYU1 1516 aa21.63■■□□□ 1.05
COL21A1-209ENST00000482933 ABCC10Q5T3U5 1492 aa21.63■■□□□ 1.05
COL21A1-209ENST00000482933 DISP1Q96F81 1524 aa21.62■■□□□ 1.05
COL21A1-209ENST00000482933 FAM69CQ0P6D2 419 aa21.62■■□□□ 1.05
COL21A1-209ENST00000482933 PRXQ9BXM0 1461 aa21.59■■□□□ 1.05
COL21A1-209ENST00000482933 CTTNBP2Q8WZ74 1663 aa21.58■■□□□ 1.05
COL21A1-209ENST00000482933 DIP2BQ9P265 1576 aa21.56■■□□□ 1.04
COL21A1-209ENST00000482933 KIAA0556O60303 1618 aa21.56■■□□□ 1.04
COL21A1-209ENST00000482933 ABCC2Q92887 1545 aa21.56■■□□□ 1.04
COL21A1-209ENST00000482933 UACAQ9BZF9 1416 aa21.56■■□□□ 1.04
COL21A1-209ENST00000482933 UHRF1BP1LA0JNW5 1464 aa21.55■■□□□ 1.04
COL21A1-209ENST00000482933 CSRNP3Q8WYN3 585 aa21.52■■□□□ 1.04
COL21A1-209ENST00000482933 GOLGA3Q08378 1498 aa21.51■■□□□ 1.03
COL21A1-209ENST00000482933 EEA1Q15075 1411 aa21.48■■□□□ 1.03
COL21A1-209ENST00000482933 PLB1Q6P1J6 1458 aa21.47■■□□□ 1.03
COL21A1-209ENST00000482933 ASXL2Q76L83 1435 aa21.45■■□□□ 1.03
COL21A1-209ENST00000482933 ABCB7O75027 752 aa21.45■■□□□ 1.02
COL21A1-209ENST00000482933 KDM5BQ9UGL1 1544 aa21.45■■□□□ 1.02
COL21A1-209ENST00000482933 FAM9AQ8IZU1 332 aaPredicted RBP21.4■■□□□ 1.02
COL21A1-209ENST00000482933 TSPOAP1O95153 1857 aa21.4■■□□□ 1.02
COL21A1-209ENST00000482933 GLI2P10070 1586 aa21.39■■□□□ 1.01
COL21A1-209ENST00000482933 ZCCHC11Q5TAX3 1644 aaKnown RBP21.38■■□□□ 1.01
COL21A1-209ENST00000482933 ABCA8O94911 1581 aa21.35■■□□□ 1.01
COL21A1-209ENST00000482933 EPRSP07814 1512 aaKnown RBP21.33■■□□□ 1.01
COL21A1-209ENST00000482933 KDM6BO15054 1643 aa21.33■■□□□ 1.01
COL21A1-209ENST00000482933 P3H3Q8IVL6 736 aa21.29■■□□□ 1
COL21A1-209ENST00000482933 WDR7Q9Y4E6 1490 aa21.29■■□□□ 1
COL21A1-209ENST00000482933 SAMD9Q5K651 1589 aa21.27■■□□□ 1
COL21A1-209ENST00000482933 PPRC1Q5VV67 1664 aaKnown RBP21.26■□□□□ 0.99
COL21A1-209ENST00000482933 ZBTB22O15209 634 aa21.26■□□□□ 0.99
COL21A1-209ENST00000482933 MAP3K4Q9Y6R4 1608 aa21.26■□□□□ 0.99
COL21A1-209ENST00000482933 KIF21BO75037 1637 aa21.25■□□□□ 0.99
COL21A1-209ENST00000482933 TEX14Q8IWB6 1497 aa21.23■□□□□ 0.99
COL21A1-209ENST00000482933 RANGAP1P46060 587 aaPredicted RBP21.2■□□□□ 0.98
COL21A1-209ENST00000482933 KCNH8Q96L42 1107 aa21.2■□□□□ 0.98
COL21A1-209ENST00000482933 ATP10BO94823 1461 aa21.17■□□□□ 0.98
COL21A1-209ENST00000482933 RAPGEF6Q8TEU7 1601 aa21.17■□□□□ 0.98
COL21A1-209ENST00000482933 CFAP43Q8NDM7 1665 aa21.16■□□□□ 0.98
COL21A1-209ENST00000482933 ARID3CA6NKF2 412 aa21.15■□□□□ 0.98
COL21A1-209ENST00000482933 CD109Q6YHK3 1445 aa21.15■□□□□ 0.98
COL21A1-209ENST00000482933 POLA2Q14181 598 aa21.14■□□□□ 0.98
COL21A1-209ENST00000482933 FHOD3Q2V2M9 1422 aa21.14■□□□□ 0.98
COL21A1-209ENST00000482933 EFCAB5A4FU69 1503 aa21.13■□□□□ 0.97
COL21A1-209ENST00000482933 MAGI3Q5TCQ9 1506 aa21.13■□□□□ 0.97
COL21A1-209ENST00000482933 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
COL21A1-209ENST00000482933 COL17A1Q9UMD9 1497 aaPredicted RBP21.1■□□□□ 0.97
COL21A1-209ENST00000482933 ATF5Q9Y2D1 282 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms