RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 EIF4G3O43432 1585 aaKnown RBP15.89■□□□□ 0.13
RPGR-208ENST00000482855 KIF21BO75037 1637 aa15.89■□□□□ 0.13
RPGR-208ENST00000482855 BCANQ96GW7 911 aa15.85■□□□□ 0.13
RPGR-208ENST00000482855 ABCA5Q8WWZ7 1642 aa15.84■□□□□ 0.13
RPGR-208ENST00000482855 ABCA10Q8WWZ4 1543 aa15.83■□□□□ 0.13
RPGR-208ENST00000482855 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
RPGR-208ENST00000482855 FKBP8Q14318 412 aa15.81■□□□□ 0.12
RPGR-208ENST00000482855 DNAJC5Q9H3Z4 198 aa15.8■□□□□ 0.12
RPGR-208ENST00000482855 PBRM1Q86U86 1689 aa15.8■□□□□ 0.12
RPGR-208ENST00000482855 RBM19Q9Y4C8 960 aaKnown RBP15.78■□□□□ 0.12
RPGR-208ENST00000482855 MAGI1Q96QZ7 1491 aaPredicted RBP15.77■□□□□ 0.12
RPGR-208ENST00000482855 KCNH8Q96L42 1107 aa15.76■□□□□ 0.11
RPGR-208ENST00000482855 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
RPGR-208ENST00000482855 NEFLP07196 543 aa15.74■□□□□ 0.11
RPGR-208ENST00000482855 ZNF608Q9ULD9 1512 aaPredicted RBP15.72■□□□□ 0.11
RPGR-208ENST00000482855 CHD1O14646 1710 aa15.71■□□□□ 0.11
RPGR-208ENST00000482855 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.11
RPGR-208ENST00000482855 GRIN2BQ13224 1484 aa15.71■□□□□ 0.1
RPGR-208ENST00000482855 RAPGEF2Q9Y4G8 1499 aa15.7■□□□□ 0.1
RPGR-208ENST00000482855 RANGAP1P46060 587 aaPredicted RBP15.69■□□□□ 0.1
RPGR-208ENST00000482855 CLASP1Q7Z460 1538 aa15.64■□□□□ 0.09
RPGR-208ENST00000482855 ADAMTS12P58397 1594 aa15.64■□□□□ 0.09
RPGR-208ENST00000482855 RAD54L2Q9Y4B4 1467 aa15.64■□□□□ 0.09
RPGR-208ENST00000482855 RRBP1Q9P2E9 1410 aaKnown RBP15.63■□□□□ 0.09
RPGR-208ENST00000482855 SYNJ2O15056 1496 aa15.63■□□□□ 0.09
RPGR-208ENST00000482855 GAPVD1Q14C86 1478 aa15.62■□□□□ 0.09
RPGR-208ENST00000482855 CUL7Q14999 1698 aa15.61■□□□□ 0.09
RPGR-208ENST00000482855 ITGAEP38570 1179 aa15.61■□□□□ 0.09
RPGR-208ENST00000482855 MSH5O43196 834 aa15.6■□□□□ 0.09
RPGR-208ENST00000482855 DDX10Q13206 875 aaKnown RBP15.59■□□□□ 0.09
RPGR-208ENST00000482855 KANK4Q5T7N3 995 aaPredicted RBP15.59■□□□□ 0.09
RPGR-208ENST00000482855 AQRO60306 1485 aaKnown RBP eCLIP15.57■□□□□ 0.089e-8■■■□□ 18.2
RPGR-208ENST00000482855 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
RPGR-208ENST00000482855 ERICH6Q7L0X2 663 aa15.57■□□□□ 0.08
RPGR-208ENST00000482855 ARAP1Q96P48 1450 aa15.57■□□□□ 0.08
RPGR-208ENST00000482855 CCNB3Q8WWL7 1395 aa15.56■□□□□ 0.08
RPGR-208ENST00000482855 FANCIQ9NVI1 1328 aa15.55■□□□□ 0.08
RPGR-208ENST00000482855 SHROOM2Q13796 1616 aa15.55■□□□□ 0.08
RPGR-208ENST00000482855 TRIM52Q96A61 297 aa15.54■□□□□ 0.08
RPGR-208ENST00000482855 MAPKBP1O60336 1514 aa15.54■□□□□ 0.08
RPGR-208ENST00000482855 CCER2I3L3R5 266 aa15.53■□□□□ 0.08
RPGR-208ENST00000482855 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
RPGR-208ENST00000482855 FHAD1B1AJZ9 1412 aa15.52■□□□□ 0.08
RPGR-208ENST00000482855 NUP160Q12769 1436 aa15.51■□□□□ 0.07
RPGR-208ENST00000482855 RAB3GAP2Q9H2M9 1393 aa15.51■□□□□ 0.07
RPGR-208ENST00000482855 PPP1R15AO75807 674 aaPredicted RBP15.5■□□□□ 0.07
RPGR-208ENST00000482855 ANP32CO43423 234 aa15.49■□□□□ 0.07
RPGR-208ENST00000482855 RIMBP3CA6NJZ7 1639 aa15.49■□□□□ 0.07
RPGR-208ENST00000482855 RIMBP3BA6NNM3 1639 aa15.49■□□□□ 0.07
RPGR-208ENST00000482855 RIMBP3Q9UFD9 1639 aa15.49■□□□□ 0.07
RPGR-208ENST00000482855 MYT1LQ9UL68 1186 aa15.49■□□□□ 0.07
RPGR-208ENST00000482855 GRIN2AQ12879 1464 aa15.48■□□□□ 0.07
RPGR-208ENST00000482855 CDK11AQ9UQ88 783 aaPredicted RBP15.48■□□□□ 0.07
RPGR-208ENST00000482855 TDRD9Q8NDG6 1382 aaKnown RBP15.46■□□□□ 0.07
RPGR-208ENST00000482855 KIF27Q86VH2 1401 aa15.45■□□□□ 0.06
RPGR-208ENST00000482855 PRXQ9BXM0 1461 aa15.44■□□□□ 0.06
RPGR-208ENST00000482855 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
RPGR-208ENST00000482855 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
RPGR-208ENST00000482855 SETD5Q9C0A6 1442 aa15.41■□□□□ 0.06
RPGR-208ENST00000482855 PRKCSHP14314 528 aaPredicted RBP15.4■□□□□ 0.06
RPGR-208ENST00000482855 SIN3AQ96ST3 1273 aa15.4■□□□□ 0.06
RPGR-208ENST00000482855 TIMELESSQ9UNS1 1208 aa15.39■□□□□ 0.06
RPGR-208ENST00000482855 HIRIP3Q9BW71 556 aaPredicted RBP15.37■□□□□ 0.05
RPGR-208ENST00000482855 DEKP35659 375 aaKnown RBP15.36■□□□□ 0.05
RPGR-208ENST00000482855 IRX6P78412 446 aaPredicted RBP15.34■□□□□ 0.05
RPGR-208ENST00000482855 ARHGAP35Q9NRY4 1499 aa15.33■□□□□ 0.04
RPGR-208ENST00000482855 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
RPGR-208ENST00000482855 IGF1RP08069 1367 aa15.32■□□□□ 0.04
RPGR-208ENST00000482855 ERICH6BQ5W0A0 696 aa15.32■□□□□ 0.04
RPGR-208ENST00000482855 KIAA0586Q9BVV6 1533 aa15.3■□□□□ 0.04
RPGR-208ENST00000482855 TIAM1Q13009 1591 aa15.29■□□□□ 0.04
RPGR-208ENST00000482855 PPP4R2Q9NY27 417 aa15.29■□□□□ 0.04
RPGR-208ENST00000482855 CTTNBP2Q8WZ74 1663 aa15.28■□□□□ 0.04
RPGR-208ENST00000482855 CHMP7Q8WUX9 453 aaPredicted RBP15.28■□□□□ 0.04
RPGR-208ENST00000482855 MAP3K1Q13233 1512 aa15.27■□□□□ 0.04
RPGR-208ENST00000482855 FAM50AQ14320 339 aaKnown RBP15.25■□□□□ 0.03
RPGR-208ENST00000482855 LRRC9Q6ZRR7 1453 aa15.23■□□□□ 0.03
RPGR-208ENST00000482855 UGGT2Q9NYU1 1516 aa15.23■□□□□ 0.03
RPGR-208ENST00000482855 PHLDB1Q86UU1 1377 aa15.23■□□□□ 0.03
RPGR-208ENST00000482855 TONSLQ96HA7 1378 aa15.23■□□□□ 0.03
RPGR-208ENST00000482855 NOP58Q9Y2X3 529 aaKnown RBP15.22■□□□□ 0.03
RPGR-208ENST00000482855 IQGAP2Q13576 1575 aa15.21■□□□□ 0.03
RPGR-208ENST00000482855 CARMIL1Q5VZK9 1371 aa15.2■□□□□ 0.02
RPGR-208ENST00000482855 NBR1Q14596 966 aa15.19■□□□□ 0.02
RPGR-208ENST00000482855 B4GALNT3Q6L9W6 998 aa15.16■□□□□ 0.02
RPGR-208ENST00000482855 CFAP43Q8NDM7 1665 aa15.14■□□□□ 0.01
RPGR-208ENST00000482855 UHRF1BP1LA0JNW5 1464 aa15.13■□□□□ 0.01
RPGR-208ENST00000482855 PAK3O75914 559 aaPredicted RBP15.12■□□□□ 0.01
RPGR-208ENST00000482855 ANO8Q9HCE9 1232 aaPredicted RBP15.11■□□□□ 0.01
RPGR-208ENST00000482855 RTL5Q5HYW3 569 aaPredicted RBP15.11■□□□□ 0.01
RPGR-208ENST00000482855 ERCC6L2Q5T890 1561 aa15.1■□□□□ 0.01
RPGR-208ENST00000482855 KIAA0556O60303 1618 aa15.09■□□□□ 0.01
RPGR-208ENST00000482855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.08■□□□□ 0
RPGR-208ENST00000482855 PRG4Q92954 1404 aaPredicted RBP15.08■□□□□ 0
RPGR-208ENST00000482855 SAMD9Q5K651 1589 aa15.07■□□□□ 0
RPGR-208ENST00000482855 CCDC18Q5T9S5 1454 aa15.07■□□□□ 0
RPGR-208ENST00000482855 ANP32AP39687 249 aaKnown RBP15.07■□□□□ 0
RPGR-208ENST00000482855 FBLN2P98095 1184 aa15.07■□□□□ 0
RPGR-208ENST00000482855 CARMIL2Q6F5E8 1435 aa15.06■□□□□ 0
RPGR-208ENST00000482855 WASHC2AQ641Q2 1341 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms