RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 SETD5Q9C0A6 1442 aa20.32■□□□□ 0.84
CCDC78-211ENST00000481804 TRIM52Q96A61 297 aa20.31■□□□□ 0.84
CCDC78-211ENST00000481804 ANP32CO43423 234 aa20.29■□□□□ 0.84
CCDC78-211ENST00000481804 P3H3Q8IVL6 736 aa20.28■□□□□ 0.84
CCDC78-211ENST00000481804 MAPKBP1O60336 1514 aa20.27■□□□□ 0.84
CCDC78-211ENST00000481804 HMGXB3Q12766 1538 aa20.27■□□□□ 0.84
CCDC78-211ENST00000481804 WDR97A6NE52 1622 aa20.23■□□□□ 0.83
CCDC78-211ENST00000481804 PHLDB1Q86UU1 1377 aa20.21■□□□□ 0.83
CCDC78-211ENST00000481804 CFTRP13569 1480 aa20.2■□□□□ 0.82
CCDC78-211ENST00000481804 TIAM1Q13009 1591 aa20.19■□□□□ 0.82
CCDC78-211ENST00000481804 PPP1R15AO75807 674 aaPredicted RBP20.18■□□□□ 0.82
CCDC78-211ENST00000481804 LRRC9Q6ZRR7 1453 aa20.17■□□□□ 0.82
CCDC78-211ENST00000481804 CARMIL1Q5VZK9 1371 aa20.17■□□□□ 0.82
CCDC78-211ENST00000481804 IGF1RP08069 1367 aa20.17■□□□□ 0.82
CCDC78-211ENST00000481804 TIMELESSQ9UNS1 1208 aa20.15■□□□□ 0.82
CCDC78-211ENST00000481804 RBM19Q9Y4C8 960 aaKnown RBP20.15■□□□□ 0.82
CCDC78-211ENST00000481804 CCER2I3L3R5 266 aa20.14■□□□□ 0.82
CCDC78-211ENST00000481804 TONSLQ96HA7 1378 aa20.13■□□□□ 0.81
CCDC78-211ENST00000481804 FHAD1B1AJZ9 1412 aa20.12■□□□□ 0.81
CCDC78-211ENST00000481804 CC2D2AQ9P2K1 1620 aa20.09■□□□□ 0.81
CCDC78-211ENST00000481804 MAP3K1Q13233 1512 aa20.09■□□□□ 0.81
CCDC78-211ENST00000481804 CADPSQ9ULU8 1353 aa20.07■□□□□ 0.8
CCDC78-211ENST00000481804 DNAJC5BQ9UF47 199 aa20.06■□□□□ 0.8
CCDC78-211ENST00000481804 HNRNPUQ00839 825 aaKnown RBP eCLIP20.04■□□□□ 0.8
CCDC78-211ENST00000481804 FHOD3Q2V2M9 1422 aa20.01■□□□□ 0.79
CCDC78-211ENST00000481804 BCL11AQ9H165 835 aa20.01■□□□□ 0.79
CCDC78-211ENST00000481804 NESP48681 1621 aa20.01■□□□□ 0.79
CCDC78-211ENST00000481804 IRX6P78412 446 aaPredicted RBP20■□□□□ 0.79
CCDC78-211ENST00000481804 ERICH6Q7L0X2 663 aa19.99■□□□□ 0.79
CCDC78-211ENST00000481804 FGD5Q6ZNL6 1462 aa19.98■□□□□ 0.79
CCDC78-211ENST00000481804 PCF11O94913 1555 aaKnown RBP19.98■□□□□ 0.79
CCDC78-211ENST00000481804 CDK11AQ9UQ88 783 aaPredicted RBP19.96■□□□□ 0.79
CCDC78-211ENST00000481804 MTUS2Q5JR59 1369 aa19.94■□□□□ 0.78
CCDC78-211ENST00000481804 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
CCDC78-211ENST00000481804 CCDC18Q5T9S5 1454 aa19.91■□□□□ 0.78
CCDC78-211ENST00000481804 FANCD2Q9BXW9 1451 aa19.91■□□□□ 0.78
CCDC78-211ENST00000481804 CFAP43Q8NDM7 1665 aa19.9■□□□□ 0.78
CCDC78-211ENST00000481804 FGD6Q6ZV73 1430 aa19.88■□□□□ 0.77
CCDC78-211ENST00000481804 FYCO1Q9BQS8 1478 aa19.88■□□□□ 0.77
CCDC78-211ENST00000481804 CASKIN1Q8WXD9 1431 aa19.86■□□□□ 0.77
CCDC78-211ENST00000481804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.85■□□□□ 0.77
CCDC78-211ENST00000481804 UACAQ9BZF9 1416 aa19.84■□□□□ 0.77
CCDC78-211ENST00000481804 PRDM2Q13029 1718 aa19.84■□□□□ 0.77
CCDC78-211ENST00000481804 MSH5O43196 834 aa19.82■□□□□ 0.76
CCDC78-211ENST00000481804 RRP7BPQ9NSQ0 103 aa19.81■□□□□ 0.76
CCDC78-211ENST00000481804 CHIC2Q9UKJ5 165 aa19.81■□□□□ 0.76
CCDC78-211ENST00000481804 FMN1Q68DA7 1419 aa19.81■□□□□ 0.76
CCDC78-211ENST00000481804 HSPA5P11021 654 aaKnown RBP19.81■□□□□ 0.76
CCDC78-211ENST00000481804 HFM1A2PYH4 1435 aa19.8■□□□□ 0.76
CCDC78-211ENST00000481804 FAM9BQ8IZU0 186 aa19.79■□□□□ 0.76
CCDC78-211ENST00000481804 EIF4G2P78344 907 aaKnown RBP eCLIP19.78■□□□□ 0.76
CCDC78-211ENST00000481804 EFCAB5A4FU69 1503 aa19.78■□□□□ 0.76
CCDC78-211ENST00000481804 PTPRKQ15262 1439 aa19.77■□□□□ 0.75
CCDC78-211ENST00000481804 WASHC2AQ641Q2 1341 aa19.76■□□□□ 0.75
CCDC78-211ENST00000481804 POLA1P09884 1462 aaPredicted RBP19.75■□□□□ 0.75
CCDC78-211ENST00000481804 FANCIQ9NVI1 1328 aa19.75■□□□□ 0.75
CCDC78-211ENST00000481804 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.75
CCDC78-211ENST00000481804 PPP4R2Q9NY27 417 aa19.74■□□□□ 0.75
CCDC78-211ENST00000481804 TOPBP1Q92547 1522 aa19.74■□□□□ 0.75
CCDC78-211ENST00000481804 NAIPQ13075 1403 aa19.73■□□□□ 0.75
CCDC78-211ENST00000481804 TDRD9Q8NDG6 1382 aaKnown RBP19.73■□□□□ 0.75
CCDC78-211ENST00000481804 PTPN23Q9H3S7 1636 aa19.73■□□□□ 0.75
CCDC78-211ENST00000481804 MRS2Q9HD23 443 aa19.72■□□□□ 0.75
CCDC78-211ENST00000481804 MYOM3Q5VTT5 1437 aa19.7■□□□□ 0.74
CCDC78-211ENST00000481804 NCOA2Q15596 1464 aa19.7■□□□□ 0.74
CCDC78-211ENST00000481804 CNGB1Q14028 1251 aaPredicted RBP19.7■□□□□ 0.74
CCDC78-211ENST00000481804 B4GALNT3Q6L9W6 998 aa19.69■□□□□ 0.74
CCDC78-211ENST00000481804 CCDC184Q52MB2 194 aa19.68■□□□□ 0.74
CCDC78-211ENST00000481804 ERICH6BQ5W0A0 696 aa19.67■□□□□ 0.74
CCDC78-211ENST00000481804 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
CCDC78-211ENST00000481804 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
CCDC78-211ENST00000481804 ABCA10Q8WWZ4 1543 aa19.65■□□□□ 0.74
CCDC78-211ENST00000481804 FOXD1Q16676 465 aa19.64■□□□□ 0.74
CCDC78-211ENST00000481804 ARID3CA6NKF2 412 aa19.64■□□□□ 0.73
CCDC78-211ENST00000481804 SNAPC4Q5SXM2 1469 aa19.63■□□□□ 0.73
CCDC78-211ENST00000481804 L3MBTL2Q969R5 705 aa19.63■□□□□ 0.73
CCDC78-211ENST00000481804 PRKRIP1Q9H875 184 aaPredicted RBP19.63■□□□□ 0.73
CCDC78-211ENST00000481804 CNTLNQ9NXG0 1405 aa19.63■□□□□ 0.73
CCDC78-211ENST00000481804 POLR3GLQ9BT43 218 aa19.62■□□□□ 0.73
CCDC78-211ENST00000481804 MPHOSPH9Q99550 1183 aa19.61■□□□□ 0.73
CCDC78-211ENST00000481804 CTTNBP2Q8WZ74 1663 aa19.6■□□□□ 0.73
CCDC78-211ENST00000481804 CUL7Q14999 1698 aa19.59■□□□□ 0.73
CCDC78-211ENST00000481804 C11orf95C9JLR9 678 aaPredicted RBP19.57■□□□□ 0.72
CCDC78-211ENST00000481804 SUPT6HQ7KZ85 1726 aaKnown RBP19.57■□□□□ 0.72
CCDC78-211ENST00000481804 CCDC7Q96M83 1385 aa19.57■□□□□ 0.72
CCDC78-211ENST00000481804 ZBED9Q6R2W3 1325 aa19.56■□□□□ 0.72
CCDC78-211ENST00000481804 KDM5BQ9UGL1 1544 aa19.56■□□□□ 0.72
CCDC78-211ENST00000481804 EHBP1L1Q8N3D4 1523 aa19.54■□□□□ 0.72
CCDC78-211ENST00000481804 GRIN2BQ13224 1484 aa19.52■□□□□ 0.71
CCDC78-211ENST00000481804 MYT1LQ9UL68 1186 aa19.51■□□□□ 0.71
CCDC78-211ENST00000481804 ZNF326Q5BKZ1 582 aaKnown RBP19.5■□□□□ 0.71
CCDC78-211ENST00000481804 NBR1Q14596 966 aa19.5■□□□□ 0.71
CCDC78-211ENST00000481804 SLC4A1APQ9BWU0 796 aaKnown RBP19.49■□□□□ 0.71
CCDC78-211ENST00000481804 SENP3-EIF4A1A0A087X0R7 540 aa19.49■□□□□ 0.71
CCDC78-211ENST00000481804 NCOA1Q15788 1441 aa19.48■□□□□ 0.71
CCDC78-211ENST00000481804 LAMC3Q9Y6N6 1575 aa19.48■□□□□ 0.71
CCDC78-211ENST00000481804 KIF21AQ7Z4S6 1674 aa19.48■□□□□ 0.71
CCDC78-211ENST00000481804 NBPF8Q3BBV2 869 aa19.48■□□□□ 0.71
CCDC78-211ENST00000481804 CCDC136Q96JN2 1154 aa19.47■□□□□ 0.71
CCDC78-211ENST00000481804 KIF7Q2M1P5 1343 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms