RNA–Protein interactions for RNA: ENST00000481205.5

RTN1-206, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 3,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-206ENST00000481205 CADPSQ9ULU8 1353 aa8.37□□□□□ -1.07
RTN1-206ENST00000481205 THOC2Q8NI27 1593 aaKnown RBP8.36□□□□□ -1.07
RTN1-206ENST00000481205 CCER1Q8TC90 406 aaPredicted RBP8.36□□□□□ -1.07
RTN1-206ENST00000481205 CUX1P39880 1505 aa8.36□□□□□ -1.07
RTN1-206ENST00000481205 CEP162Q5TB80 1403 aa8.35□□□□□ -1.07
RTN1-206ENST00000481205 RANGAP1P46060 587 aaPredicted RBP8.35□□□□□ -1.07
RTN1-206ENST00000481205 DNMBPQ6XZF7 1577 aa8.35□□□□□ -1.07
RTN1-206ENST00000481205 CFAP44Q96MT7 982 aa8.34□□□□□ -1.07
RTN1-206ENST00000481205 WDR62O43379 1518 aa8.33□□□□□ -1.08
RTN1-206ENST00000481205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.33□□□□□ -1.08
RTN1-206ENST00000481205 EEA1Q15075 1411 aa8.33□□□□□ -1.08
RTN1-206ENST00000481205 NESP48681 1621 aa8.32□□□□□ -1.08
RTN1-206ENST00000481205 TNIKQ9UKE5 1360 aa8.32□□□□□ -1.08
RTN1-206ENST00000481205 RAPGEF2Q9Y4G8 1499 aa8.32□□□□□ -1.08
RTN1-206ENST00000481205 GOLGA3Q08378 1498 aa8.31□□□□□ -1.08
RTN1-206ENST00000481205 PLEKHG5O94827 1062 aa8.3□□□□□ -1.08
RTN1-206ENST00000481205 TARBP1Q13395 1621 aaKnown RBP8.29□□□□□ -1.08
RTN1-206ENST00000481205 FANCD2Q9BXW9 1451 aa8.29□□□□□ -1.08
RTN1-206ENST00000481205 CEP164Q9UPV0 1460 aa8.28□□□□□ -1.08
RTN1-206ENST00000481205 URB2Q14146 1524 aaKnown RBP8.27□□□□□ -1.09
RTN1-206ENST00000481205 ABCA5Q8WWZ7 1642 aa8.27□□□□□ -1.09
RTN1-206ENST00000481205 PAXIP1Q6ZW49 1069 aaPredicted RBP8.27□□□□□ -1.09
RTN1-206ENST00000481205 KIF21BO75037 1637 aa8.26□□□□□ -1.09
RTN1-206ENST00000481205 TOPBP1Q92547 1522 aa8.25□□□□□ -1.09
RTN1-206ENST00000481205 FGD5Q6ZNL6 1462 aa8.24□□□□□ -1.09
RTN1-206ENST00000481205 ANP32EQ9BTT0 268 aa8.24□□□□□ -1.09
RTN1-206ENST00000481205 CLIP1P30622 1438 aa8.24□□□□□ -1.09
RTN1-206ENST00000481205 PDS5BQ9NTI5 1447 aa8.24□□□□□ -1.09
RTN1-206ENST00000481205 MRC2Q9UBG0 1479 aa8.23□□□□□ -1.09
RTN1-206ENST00000481205 NPM1P06748 294 aaKnown RBP eCLIP8.23□□□□□ -1.09
RTN1-206ENST00000481205 TSHZ2Q9NRE2 1034 aa8.23□□□□□ -1.09
RTN1-206ENST00000481205 CUX2O14529 1486 aa8.23□□□□□ -1.09
RTN1-206ENST00000481205 PRXQ9BXM0 1461 aa8.23□□□□□ -1.09
RTN1-206ENST00000481205 ABCA10Q8WWZ4 1543 aa8.23□□□□□ -1.09
RTN1-206ENST00000481205 KIF27Q86VH2 1401 aa8.22□□□□□ -1.09
RTN1-206ENST00000481205 RAD54L2Q9Y4B4 1467 aa8.22□□□□□ -1.09
RTN1-206ENST00000481205 IFNLR1Q8IU57 520 aaPredicted RBP8.21□□□□□ -1.1
RTN1-206ENST00000481205 ACIN1Q9UKV3 1341 aaKnown RBP8.21□□□□□ -1.1
RTN1-206ENST00000481205 PKD2Q13563 968 aa8.2□□□□□ -1.1
RTN1-206ENST00000481205 IGF1RP08069 1367 aa8.2□□□□□ -1.1
RTN1-206ENST00000481205 PBRM1Q86U86 1689 aa8.2□□□□□ -1.1
RTN1-206ENST00000481205 GTF3C3Q9Y5Q9 886 aa8.19□□□□□ -1.1
RTN1-206ENST00000481205 DIEXFQ68CQ4 756 aaKnown RBP8.19□□□□□ -1.1
RTN1-206ENST00000481205 UBE2Q2Q8WVN8 375 aa8.19□□□□□ -1.1
RTN1-206ENST00000481205 POLA1P09884 1462 aaPredicted RBP8.19□□□□□ -1.1
RTN1-206ENST00000481205 CUL7Q14999 1698 aa8.18□□□□□ -1.1
RTN1-206ENST00000481205 ERICH3Q5RHP9 1530 aa8.18□□□□□ -1.1
RTN1-206ENST00000481205 PODXL2Q9NZ53 605 aa8.16□□□□□ -1.1
RTN1-206ENST00000481205 VPS8Q8N3P4 1428 aa8.15□□□□□ -1.1
RTN1-206ENST00000481205 CARMIL1Q5VZK9 1371 aa8.14□□□□□ -1.11
RTN1-206ENST00000481205 ARAP1Q96P48 1450 aa8.14□□□□□ -1.11
RTN1-206ENST00000481205 HNRNPUL2Q1KMD3 747 aaKnown RBP8.14□□□□□ -1.11
RTN1-206ENST00000481205 TDRD9Q8NDG6 1382 aaKnown RBP8.13□□□□□ -1.11
RTN1-206ENST00000481205 ANO8Q9HCE9 1232 aaPredicted RBP8.13□□□□□ -1.11
RTN1-206ENST00000481205 IFT140Q96RY7 1462 aa8.12□□□□□ -1.11
RTN1-206ENST00000481205 NEUROD1Q13562 356 aa8.12□□□□□ -1.11
RTN1-206ENST00000481205 VSIG10Q8N0Z9 540 aa8.12□□□□□ -1.11
RTN1-206ENST00000481205 MYCNP04198 464 aaPredicted RBP8.11□□□□□ -1.11
RTN1-206ENST00000481205 KANK4Q5T7N3 995 aaPredicted RBP8.11□□□□□ -1.11
RTN1-206ENST00000481205 P3H3Q8IVL6 736 aa8.11□□□□□ -1.11
RTN1-206ENST00000481205 ADAMTS12P58397 1594 aa8.11□□□□□ -1.11
RTN1-206ENST00000481205 ARHGAP35Q9NRY4 1499 aa8.11□□□□□ -1.11
RTN1-206ENST00000481205 EIF4G3O43432 1585 aaKnown RBP8.11□□□□□ -1.11
RTN1-206ENST00000481205 ZNF316A6NFI3 1004 aaPredicted RBP8.1□□□□□ -1.11
RTN1-206ENST00000481205 CTTNBP2Q8WZ74 1663 aa8.09□□□□□ -1.11
RTN1-206ENST00000481205 VASPP50552 380 aaPredicted RBP8.09□□□□□ -1.11
RTN1-206ENST00000481205 RNF216Q9NWF9 866 aaPredicted RBP8.09□□□□□ -1.11
RTN1-206ENST00000481205 ERCC6Q03468 1493 aa8.07□□□□□ -1.12
RTN1-206ENST00000481205 YTHDC1Q96MU7 727 aaKnown RBP8.06□□□□□ -1.12
RTN1-206ENST00000481205 PKNOX2Q96KN3 472 aa8.06□□□□□ -1.12
RTN1-206ENST00000481205 AQRO60306 1485 aaKnown RBP eCLIP8.04□□□□□ -1.12
RTN1-206ENST00000481205 GAPVD1Q14C86 1478 aa8.04□□□□□ -1.12
RTN1-206ENST00000481205 FHOD3Q2V2M9 1422 aa8.03□□□□□ -1.12
RTN1-206ENST00000481205 TRHP20396 242 aaPredicted RBP8.03□□□□□ -1.12
RTN1-206ENST00000481205 C14orf37Q86TY3 774 aa8.03□□□□□ -1.12
RTN1-206ENST00000481205 ATP1B4Q9UN42 357 aaPredicted RBP8.03□□□□□ -1.12
RTN1-206ENST00000481205 SAMD9Q5K651 1589 aa8.03□□□□□ -1.12
RTN1-206ENST00000481205 RGL2O15211 777 aa8.02□□□□□ -1.13
RTN1-206ENST00000481205 ZNF608Q9ULD9 1512 aaPredicted RBP8.01□□□□□ -1.13
RTN1-206ENST00000481205 SHROOM2Q13796 1616 aa8.01□□□□□ -1.13
RTN1-206ENST00000481205 MAGI1Q96QZ7 1491 aaPredicted RBP8.01□□□□□ -1.13
RTN1-206ENST00000481205 ARXQ96QS3 562 aa8.01□□□□□ -1.13
RTN1-206ENST00000481205 DCAF8L1A6NGE4 600 aa8.01□□□□□ -1.13
RTN1-206ENST00000481205 GRIN2BQ13224 1484 aa8□□□□□ -1.13
RTN1-206ENST00000481205 TMEM132AQ24JP5 1023 aa7.99□□□□□ -1.13
RTN1-206ENST00000481205 ITGAEP38570 1179 aa7.98□□□□□ -1.13
RTN1-206ENST00000481205 SPDYE4A6NLX3 237 aa7.98□□□□□ -1.13
RTN1-206ENST00000481205 MIER1Q8N108 512 aa7.98□□□□□ -1.13
RTN1-206ENST00000481205 KLHL34Q8N239 644 aa7.98□□□□□ -1.13
RTN1-206ENST00000481205 NBR1Q14596 966 aa7.97□□□□□ -1.13
RTN1-206ENST00000481205 PCF11O94913 1555 aaKnown RBP7.97□□□□□ -1.13
RTN1-206ENST00000481205 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.97□□□□□ -1.13
RTN1-206ENST00000481205 CHD1O14646 1710 aa7.96□□□□□ -1.13
RTN1-206ENST00000481205 FHAD1B1AJZ9 1412 aa7.96□□□□□ -1.13
RTN1-206ENST00000481205 EFCAB5A4FU69 1503 aa7.96□□□□□ -1.14
RTN1-206ENST00000481205 CLASP1Q7Z460 1538 aa7.96□□□□□ -1.14
RTN1-206ENST00000481205 ECM2O94769 699 aaPredicted RBP7.96□□□□□ -1.14
RTN1-206ENST00000481205 TIAM1Q13009 1591 aa7.95□□□□□ -1.14
RTN1-206ENST00000481205 CEP170Q5SW79 1584 aa7.95□□□□□ -1.14
RTN1-206ENST00000481205 HOMEZQ8IX15 550 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms