RNA–Protein interactions for RNA: ENST00000481205.5

RTN1-206, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 3,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-206ENST00000481205 CHIC1Q5VXU3 224 aa12.06□□□□□ -0.48
RTN1-206ENST00000481205 AEBP2Q6ZN18 517 aaPredicted RBP12□□□□□ -0.49
RTN1-206ENST00000481205 NISCHQ9Y2I1 1504 aa11.6□□□□□ -0.55
RTN1-206ENST00000481205 PHF23Q9BUL5 403 aaPredicted RBP11.05□□□□□ -0.64
RTN1-206ENST00000481205 EHMT2Q96KQ7 1210 aa10.79□□□□□ -0.68
RTN1-206ENST00000481205 CCDC180Q9P1Z9 1646 aa10.4□□□□□ -0.74
RTN1-206ENST00000481205 KCNA4P22459 653 aa10.18□□□□□ -0.78
RTN1-206ENST00000481205 PLPPR3Q6T4P5 718 aa10.16□□□□□ -0.78
RTN1-206ENST00000481205 ADRA2BP18089 450 aa10.08□□□□□ -0.8
RTN1-206ENST00000481205 SLC24A1O60721 1099 aa9.98□□□□□ -0.81
RTN1-206ENST00000481205 CSRNP3Q8WYN3 585 aa9.92□□□□□ -0.82
RTN1-206ENST00000481205 DCAF1Q9Y4B6 1507 aa9.82□□□□□ -0.84
RTN1-206ENST00000481205 ZCCHC6Q5VYS8 1495 aaKnown RBP9.8□□□□□ -0.84
RTN1-206ENST00000481205 RTN4Q9NQC3 1192 aaKnown RBP9.79□□□□□ -0.84
RTN1-206ENST00000481205 MYO15BQ96JP2 1530 aa9.77□□□□□ -0.84
RTN1-206ENST00000481205 SHROOM4Q9ULL8 1493 aa9.75□□□□□ -0.85
RTN1-206ENST00000481205 PELP1Q8IZL8 1130 aaKnown RBP9.73□□□□□ -0.85
RTN1-206ENST00000481205 PPP6R1Q9UPN7 881 aa9.69□□□□□ -0.86
RTN1-206ENST00000481205 DCAF8L2P0C7V8 631 aa9.68□□□□□ -0.86
RTN1-206ENST00000481205 MYT1Q01538 1121 aa9.65□□□□□ -0.87
RTN1-206ENST00000481205 SLC4A1APQ9BWU0 796 aaKnown RBP9.6□□□□□ -0.87
RTN1-206ENST00000481205 NACADO15069 1562 aa9.55□□□□□ -0.88
RTN1-206ENST00000481205 SENP3Q9H4L4 574 aaPredicted RBP9.54□□□□□ -0.88
RTN1-206ENST00000481205 ZBTB22O15209 634 aa9.46□□□□□ -0.89
RTN1-206ENST00000481205 SUPT5HO00267 1087 aaKnown RBP9.44□□□□□ -0.9
RTN1-206ENST00000481205 RB1CC1Q8TDY2 1594 aa9.41□□□□□ -0.9
RTN1-206ENST00000481205 ABCC9O60706 1549 aa9.41□□□□□ -0.9
RTN1-206ENST00000481205 UNC13AQ9UPW8 1703 aa9.41□□□□□ -0.9
RTN1-206ENST00000481205 TTBK1Q5TCY1 1321 aaPredicted RBP9.33□□□□□ -0.92
RTN1-206ENST00000481205 SCRIBQ14160 1630 aa9.26□□□□□ -0.93
RTN1-206ENST00000481205 PRKCSHP14314 528 aaPredicted RBP9.25□□□□□ -0.93
RTN1-206ENST00000481205 BICRAQ9NZM4 1560 aa9.24□□□□□ -0.93
RTN1-206ENST00000481205 NPM3O75607 178 aaKnown RBP9.19□□□□□ -0.94
RTN1-206ENST00000481205 PPP4R3CPQ6ZMV5 832 aa9.17□□□□□ -0.94
RTN1-206ENST00000481205 AMER1Q5JTC6 1135 aaPredicted RBP9.15□□□□□ -0.94
RTN1-206ENST00000481205 FOXD1Q16676 465 aa9.14□□□□□ -0.95
RTN1-206ENST00000481205 CECR2Q9BXF3 1484 aa9.05□□□□□ -0.96
RTN1-206ENST00000481205 RSF1Q96T23 1441 aaPredicted RBP9.05□□□□□ -0.96
RTN1-206ENST00000481205 PEG3Q9GZU2 1588 aa9.05□□□□□ -0.96
RTN1-206ENST00000481205 ERICH6Q7L0X2 663 aa9□□□□□ -0.97
RTN1-206ENST00000481205 FKBP8Q14318 412 aa8.99□□□□□ -0.97
RTN1-206ENST00000481205 PABPN1Q86U42 306 aaKnown RBP eCLIP8.98□□□□□ -0.97
RTN1-206ENST00000481205 SMARCA4P51532 1647 aa8.97□□□□□ -0.97
RTN1-206ENST00000481205 MROH2BQ7Z745 1585 aa8.97□□□□□ -0.97
RTN1-206ENST00000481205 BAZ1AQ9NRL2 1556 aaPredicted RBP8.95□□□□□ -0.98
RTN1-206ENST00000481205 APLP2Q06481 763 aa8.95□□□□□ -0.98
RTN1-206ENST00000481205 WIZO95785 1651 aa8.91□□□□□ -0.98
RTN1-206ENST00000481205 PCGF6Q9BYE7 350 aa8.89□□□□□ -0.99
RTN1-206ENST00000481205 HRCP23327 699 aa8.87□□□□□ -0.99
RTN1-206ENST00000481205 POTEDQ86YR6 584 aa8.87□□□□□ -0.99
RTN1-206ENST00000481205 SMARCA2P51531 1590 aa8.86□□□□□ -0.99
RTN1-206ENST00000481205 EIF4G1Q04637 1599 aaKnown RBP8.85□□□□□ -0.99
RTN1-206ENST00000481205 PIAS4Q8N2W9 510 aaPredicted RBP8.84□□□□□ -0.99
RTN1-206ENST00000481205 HMGXB3Q12766 1538 aa8.84□□□□□ -0.99
RTN1-206ENST00000481205 TOP2AP11388 1531 aaKnown RBP8.82□□□□□ -1
RTN1-206ENST00000481205 LOC105371045A0A1W2PR82 267 aa8.81□□□□□ -1
RTN1-206ENST00000481205 BCL11AQ9H165 835 aa8.81□□□□□ -1
RTN1-206ENST00000481205 NCBP3Q53F19 620 aaKnown RBP8.79□□□□□ -1
RTN1-206ENST00000481205 TRIM41Q8WV44 630 aa8.76□□□□□ -1.01
RTN1-206ENST00000481205 NCAPD3P42695 1498 aa8.75□□□□□ -1.01
RTN1-206ENST00000481205 ATAD2BQ9ULI0 1458 aa8.75□□□□□ -1.01
RTN1-206ENST00000481205 FAM9AQ8IZU1 332 aaPredicted RBP8.75□□□□□ -1.01
RTN1-206ENST00000481205 PRDM2Q13029 1718 aa8.74□□□□□ -1.01
RTN1-206ENST00000481205 HAP1P54257 671 aaPredicted RBP8.74□□□□□ -1.01
RTN1-206ENST00000481205 FOXD4L1Q9NU39 408 aa8.74□□□□□ -1.01
RTN1-206ENST00000481205 CCDC88BA6NC98 1476 aa8.72□□□□□ -1.01
RTN1-206ENST00000481205 CC2D2AQ9P2K1 1620 aa8.71□□□□□ -1.01
RTN1-206ENST00000481205 PPARGC1BQ86YN6 1023 aaKnown RBP8.7□□□□□ -1.02
RTN1-206ENST00000481205 DAXXQ9UER7 740 aaPredicted RBP8.7□□□□□ -1.02
RTN1-206ENST00000481205 TPRNQ4KMQ1 711 aa8.7□□□□□ -1.02
RTN1-206ENST00000481205 MAPK8IP2Q13387 824 aaPredicted RBP8.67□□□□□ -1.02
RTN1-206ENST00000481205 TAOK2Q9UL54 1235 aa8.67□□□□□ -1.02
RTN1-206ENST00000481205 TRIM26Q12899 539 aaPredicted RBP8.66□□□□□ -1.02
RTN1-206ENST00000481205 ABCC8Q09428 1581 aa8.65□□□□□ -1.02
RTN1-206ENST00000481205 SCAF1Q9H7N4 1312 aaKnown RBP8.65□□□□□ -1.03
RTN1-206ENST00000481205 TIMELESSQ9UNS1 1208 aa8.65□□□□□ -1.03
RTN1-206ENST00000481205 PLCB2Q00722 1185 aa8.63□□□□□ -1.03
RTN1-206ENST00000481205 BAZ1BQ9UIG0 1483 aaKnown RBP8.61□□□□□ -1.03
RTN1-206ENST00000481205 TULP1O00294 542 aaPredicted RBP8.59□□□□□ -1.03
RTN1-206ENST00000481205 FBLN2P98095 1184 aa8.57□□□□□ -1.04
RTN1-206ENST00000481205 SOGA1O94964 1423 aa8.53□□□□□ -1.04
RTN1-206ENST00000481205 ZEB1P37275 1124 aaPredicted RBP8.53□□□□□ -1.04
RTN1-206ENST00000481205 RUSC2Q8N2Y8 1516 aa8.52□□□□□ -1.05
RTN1-206ENST00000481205 CFTRP13569 1480 aa8.51□□□□□ -1.05
RTN1-206ENST00000481205 BIVM-ERCC5R4GMW8 1640 aa8.51□□□□□ -1.05
RTN1-206ENST00000481205 LAMC3Q9Y6N6 1575 aa8.51□□□□□ -1.05
RTN1-206ENST00000481205 CNKSR2Q8WXI2 1034 aa8.5□□□□□ -1.05
RTN1-206ENST00000481205 EIF5BO60841 1220 aaKnown RBP8.49□□□□□ -1.05
RTN1-206ENST00000481205 WRNQ14191 1432 aaPredicted RBP eCLIP8.49□□□□□ -1.05
RTN1-206ENST00000481205 KDM2AQ9Y2K7 1162 aa8.48□□□□□ -1.05
RTN1-206ENST00000481205 SYNJ1O43426 1573 aa8.48□□□□□ -1.05
RTN1-206ENST00000481205 SLC4A2P04920 1241 aa8.47□□□□□ -1.05
RTN1-206ENST00000481205 BCANQ96GW7 911 aa8.47□□□□□ -1.05
RTN1-206ENST00000481205 CENPBP07199 599 aaPredicted RBP8.45□□□□□ -1.06
RTN1-206ENST00000481205 TOP2BQ02880 1626 aa8.43□□□□□ -1.06
RTN1-206ENST00000481205 WDR97A6NE52 1622 aa8.42□□□□□ -1.06
RTN1-206ENST00000481205 DNAJC5BQ9UF47 199 aa8.41□□□□□ -1.06
RTN1-206ENST00000481205 ATF5Q9Y2D1 282 aaPredicted RBP8.41□□□□□ -1.06
RTN1-206ENST00000481205 KIF21AQ7Z4S6 1674 aa8.39□□□□□ -1.07
RTN1-206ENST00000481205 UBTFP17480 764 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms