RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.85
NR1H3-220ENST00000481020 LRRC9Q6ZRR7 1453 aa20.39■□□□□ 0.85
NR1H3-220ENST00000481020 CCER2I3L3R5 266 aa20.39■□□□□ 0.85
NR1H3-220ENST00000481020 PRDM2Q13029 1718 aa20.38■□□□□ 0.85
NR1H3-220ENST00000481020 CFAP43Q8NDM7 1665 aa20.35■□□□□ 0.85
NR1H3-220ENST00000481020 IGF1RP08069 1367 aa20.31■□□□□ 0.84
NR1H3-220ENST00000481020 DNAJC5BQ9UF47 199 aa20.3■□□□□ 0.84
NR1H3-220ENST00000481020 PPP1R15AO75807 674 aaPredicted RBP20.28■□□□□ 0.84
NR1H3-220ENST00000481020 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
NR1H3-220ENST00000481020 NEFLP07196 543 aa20.27■□□□□ 0.84
NR1H3-220ENST00000481020 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.849e-8■■■■□ 21.2
NR1H3-220ENST00000481020 CARMIL1Q5VZK9 1371 aa20.24■□□□□ 0.83
NR1H3-220ENST00000481020 EFCAB5A4FU69 1503 aa20.24■□□□□ 0.83
NR1H3-220ENST00000481020 FYCO1Q9BQS8 1478 aa20.23■□□□□ 0.83
NR1H3-220ENST00000481020 PHLDB1Q86UU1 1377 aa20.23■□□□□ 0.83
NR1H3-220ENST00000481020 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
NR1H3-220ENST00000481020 NESP48681 1621 aa20.19■□□□□ 0.82
NR1H3-220ENST00000481020 ANP32CO43423 234 aa20.19■□□□□ 0.82
NR1H3-220ENST00000481020 FKBP8Q14318 412 aa20.18■□□□□ 0.82
NR1H3-220ENST00000481020 FGD5Q6ZNL6 1462 aa20.17■□□□□ 0.82
NR1H3-220ENST00000481020 ITGAEP38570 1179 aa20.16■□□□□ 0.82
NR1H3-220ENST00000481020 DDX10Q13206 875 aaKnown RBP20.16■□□□□ 0.82
NR1H3-220ENST00000481020 FANCD2Q9BXW9 1451 aa20.16■□□□□ 0.82
NR1H3-220ENST00000481020 CASKIN1Q8WXD9 1431 aa20.16■□□□□ 0.82
NR1H3-220ENST00000481020 PCF11O94913 1555 aaKnown RBP20.15■□□□□ 0.82
NR1H3-220ENST00000481020 KCNH8Q96L42 1107 aa20.14■□□□□ 0.81
NR1H3-220ENST00000481020 ERICH6BQ5W0A0 696 aa20.1■□□□□ 0.81
NR1H3-220ENST00000481020 UACAQ9BZF9 1416 aa20.08■□□□□ 0.81
NR1H3-220ENST00000481020 HFM1A2PYH4 1435 aa20.08■□□□□ 0.8
NR1H3-220ENST00000481020 FAM50AQ14320 339 aaKnown RBP20.07■□□□□ 0.8
NR1H3-220ENST00000481020 SIN3AQ96ST3 1273 aa20.07■□□□□ 0.8
NR1H3-220ENST00000481020 FMN1Q68DA7 1419 aa20.06■□□□□ 0.8
NR1H3-220ENST00000481020 PDS5BQ9NTI5 1447 aa20.06■□□□□ 0.8
NR1H3-220ENST00000481020 TONSLQ96HA7 1378 aa20.06■□□□□ 0.8
NR1H3-220ENST00000481020 RBM19Q9Y4C8 960 aaKnown RBP20.06■□□□□ 0.8
NR1H3-220ENST00000481020 CUL7Q14999 1698 aa20.05■□□□□ 0.8
NR1H3-220ENST00000481020 FGD6Q6ZV73 1430 aa20.04■□□□□ 0.8
NR1H3-220ENST00000481020 THOC2Q8NI27 1593 aaKnown RBP20.01■□□□□ 0.79
NR1H3-220ENST00000481020 CCDC18Q5T9S5 1454 aa20.01■□□□□ 0.79
NR1H3-220ENST00000481020 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
NR1H3-220ENST00000481020 FANCIQ9NVI1 1328 aa20■□□□□ 0.79
NR1H3-220ENST00000481020 BCANQ96GW7 911 aa19.99■□□□□ 0.79
NR1H3-220ENST00000481020 PTPN23Q9H3S7 1636 aa19.97■□□□□ 0.79
NR1H3-220ENST00000481020 DNMBPQ6XZF7 1577 aa19.97■□□□□ 0.79
NR1H3-220ENST00000481020 CTTNBP2Q8WZ74 1663 aa19.97■□□□□ 0.79
NR1H3-220ENST00000481020 MYT1LQ9UL68 1186 aa19.95■□□□□ 0.78
NR1H3-220ENST00000481020 SNAPC4Q5SXM2 1469 aa19.94■□□□□ 0.78
NR1H3-220ENST00000481020 TOPBP1Q92547 1522 aa19.94■□□□□ 0.78
NR1H3-220ENST00000481020 FHOD3Q2V2M9 1422 aa19.93■□□□□ 0.78
NR1H3-220ENST00000481020 AKNAQ7Z591 1439 aa19.93■□□□□ 0.78
NR1H3-220ENST00000481020 KIF21AQ7Z4S6 1674 aa19.92■□□□□ 0.78
NR1H3-220ENST00000481020 BCL11AQ9H165 835 aa19.9■□□□□ 0.78
NR1H3-220ENST00000481020 NAIPQ13075 1403 aa19.9■□□□□ 0.78
NR1H3-220ENST00000481020 MYOM3Q5VTT5 1437 aa19.9■□□□□ 0.78
NR1H3-220ENST00000481020 URB2Q14146 1524 aaKnown RBP19.9■□□□□ 0.78
NR1H3-220ENST00000481020 TRIM52Q96A61 297 aa19.9■□□□□ 0.78
NR1H3-220ENST00000481020 KDM5BQ9UGL1 1544 aa19.89■□□□□ 0.77
NR1H3-220ENST00000481020 CDK11AQ9UQ88 783 aaPredicted RBP19.88■□□□□ 0.77
NR1H3-220ENST00000481020 EHBP1L1Q8N3D4 1523 aa19.88■□□□□ 0.77
NR1H3-220ENST00000481020 SAMD9Q5K651 1589 aa19.88■□□□□ 0.77
NR1H3-220ENST00000481020 NCOA2Q15596 1464 aa19.88■□□□□ 0.77
NR1H3-220ENST00000481020 MTUS2Q5JR59 1369 aa19.88■□□□□ 0.77
NR1H3-220ENST00000481020 SUPT6HQ7KZ85 1726 aaKnown RBP19.85■□□□□ 0.77
NR1H3-220ENST00000481020 HECW1Q76N89 1606 aa19.84■□□□□ 0.77
NR1H3-220ENST00000481020 POLA1P09884 1462 aaPredicted RBP19.84■□□□□ 0.77
NR1H3-220ENST00000481020 ARHGEF11O15085 1522 aa19.83■□□□□ 0.77
NR1H3-220ENST00000481020 GRIN2BQ13224 1484 aa19.83■□□□□ 0.76
NR1H3-220ENST00000481020 TCOF1Q13428 1488 aaKnown RBP19.83■□□□□ 0.76
NR1H3-220ENST00000481020 GCC2Q8IWJ2 1684 aa19.82■□□□□ 0.76
NR1H3-220ENST00000481020 PTPRKQ15262 1439 aa19.81■□□□□ 0.76
NR1H3-220ENST00000481020 MRC2Q9UBG0 1479 aa19.81■□□□□ 0.76
NR1H3-220ENST00000481020 UGGT2Q9NYU1 1516 aa19.79■□□□□ 0.76
NR1H3-220ENST00000481020 CNTLNQ9NXG0 1405 aa19.79■□□□□ 0.76
NR1H3-220ENST00000481020 PPP4R2Q9NY27 417 aa19.79■□□□□ 0.76
NR1H3-220ENST00000481020 HNRNPUQ00839 825 aaKnown RBP eCLIP19.78■□□□□ 0.76
NR1H3-220ENST00000481020 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
NR1H3-220ENST00000481020 ATP1B4Q9UN42 357 aaPredicted RBP19.76■□□□□ 0.75
NR1H3-220ENST00000481020 P3H3Q8IVL6 736 aa19.75■□□□□ 0.75
NR1H3-220ENST00000481020 EIF4G2P78344 907 aaKnown RBP eCLIP19.74■□□□□ 0.75
NR1H3-220ENST00000481020 HIRIP3Q9BW71 556 aaPredicted RBP19.74■□□□□ 0.75
NR1H3-220ENST00000481020 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
NR1H3-220ENST00000481020 MIA2Q96PC5 1412 aa19.73■□□□□ 0.75
NR1H3-220ENST00000481020 WASHC2AQ641Q2 1341 aa19.72■□□□□ 0.75
NR1H3-220ENST00000481020 MSH5O43196 834 aa19.71■□□□□ 0.75
NR1H3-220ENST00000481020 NCOA1Q15788 1441 aa19.71■□□□□ 0.75
NR1H3-220ENST00000481020 ERICH6Q7L0X2 663 aa19.71■□□□□ 0.75
NR1H3-220ENST00000481020 ZBED9Q6R2W3 1325 aa19.7■□□□□ 0.74
NR1H3-220ENST00000481020 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
NR1H3-220ENST00000481020 WDR62O43379 1518 aa19.69■□□□□ 0.74
NR1H3-220ENST00000481020 HSPA5P11021 654 aaKnown RBP19.69■□□□□ 0.74
NR1H3-220ENST00000481020 LRRIQ1Q96JM4 1722 aa19.68■□□□□ 0.74
NR1H3-220ENST00000481020 CCDC7Q96M83 1385 aa19.64■□□□□ 0.74
NR1H3-220ENST00000481020 DENND4BO75064 1496 aaPredicted RBP19.64■□□□□ 0.73
NR1H3-220ENST00000481020 POLR1AO95602 1720 aaPredicted RBP19.64■□□□□ 0.73
NR1H3-220ENST00000481020 ROCK1Q13464 1354 aa19.64■□□□□ 0.73
NR1H3-220ENST00000481020 TARBP1Q13395 1621 aaKnown RBP19.62■□□□□ 0.73
NR1H3-220ENST00000481020 PRKRIP1Q9H875 184 aaPredicted RBP19.62■□□□□ 0.73
NR1H3-220ENST00000481020 RPRD2Q5VT52 1461 aaKnown RBP19.6■□□□□ 0.73
NR1H3-220ENST00000481020 GAPVD1Q14C86 1478 aa19.58■□□□□ 0.73
NR1H3-220ENST00000481020 TDRD9Q8NDG6 1382 aaKnown RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms