RNA–Protein interactions for RNA: ENST00000479105.6

RFC2-206, Transcript of replication factor C subunit 2, humanhuman

TSL 5

Gene RFC2, Length 957 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-206ENST00000479105 CHRDL2Q6WN34 429 aa14.73□□□□□ -0.05
RFC2-206ENST00000479105 WRNQ14191 1432 aaPredicted RBP eCLIP14.72□□□□□ -0.05
RFC2-206ENST00000479105 CLEC11AQ9Y240 323 aa14.71□□□□□ -0.05
RFC2-206ENST00000479105 CADPSQ9ULU8 1353 aa14.69□□□□□ -0.06
RFC2-206ENST00000479105 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
RFC2-206ENST00000479105 BIVM-ERCC5R4GMW8 1640 aa14.66□□□□□ -0.06
RFC2-206ENST00000479105 TOP2BQ02880 1626 aa14.65□□□□□ -0.06
RFC2-206ENST00000479105 STAG3Q9UJ98 1225 aa14.64□□□□□ -0.07
RFC2-206ENST00000479105 LAMC3Q9Y6N6 1575 aa14.62□□□□□ -0.07
RFC2-206ENST00000479105 EEA1Q15075 1411 aa14.58□□□□□ -0.07
RFC2-206ENST00000479105 PRR29P0C7W0 189 aa14.56□□□□□ -0.08
RFC2-206ENST00000479105 CUX1P39880 1505 aa14.56□□□□□ -0.08
RFC2-206ENST00000479105 FANCD2Q9BXW9 1451 aa14.54□□□□□ -0.08
RFC2-206ENST00000479105 FXR2P51116 673 aaKnown RBP eCLIP14.53□□□□□ -0.08
RFC2-206ENST00000479105 NESP48681 1621 aa14.52□□□□□ -0.09
RFC2-206ENST00000479105 PIP4P2Q8N4L2 257 aa14.51□□□□□ -0.09
RFC2-206ENST00000479105 SOGA1O94964 1423 aa14.49□□□□□ -0.09
RFC2-206ENST00000479105 FAM9AQ8IZU1 332 aaPredicted RBP14.48□□□□□ -0.09
RFC2-206ENST00000479105 LOC105371045A0A1W2PR82 267 aa14.47□□□□□ -0.09
RFC2-206ENST00000479105 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
RFC2-206ENST00000479105 CEP164Q9UPV0 1460 aa14.46□□□□□ -0.09
RFC2-206ENST00000479105 PDS5BQ9NTI5 1447 aa14.46□□□□□ -0.09
RFC2-206ENST00000479105 POTEHQ6S545 545 aa14.44□□□□□ -0.1
RFC2-206ENST00000479105 RUSC2Q8N2Y8 1516 aa14.43□□□□□ -0.1
RFC2-206ENST00000479105 FBXO3Q9UK99 471 aa14.43□□□□□ -0.1
RFC2-206ENST00000479105 KIF21AQ7Z4S6 1674 aa14.42□□□□□ -0.1
RFC2-206ENST00000479105 KIF21BO75037 1637 aa14.41□□□□□ -0.1
RFC2-206ENST00000479105 PRKAR2AP13861 404 aaKnown RBP14.4□□□□□ -0.1
RFC2-206ENST00000479105 TOPBP1Q92547 1522 aa14.4□□□□□ -0.1
RFC2-206ENST00000479105 FGD5Q6ZNL6 1462 aa14.39□□□□□ -0.11
RFC2-206ENST00000479105 CHADLQ6NUI6 762 aa14.36□□□□□ -0.11
RFC2-206ENST00000479105 URB2Q14146 1524 aaKnown RBP14.36□□□□□ -0.11
RFC2-206ENST00000479105 KIF27Q86VH2 1401 aa14.35□□□□□ -0.11
RFC2-206ENST00000479105 GOLGA3Q08378 1498 aa14.35□□□□□ -0.11
RFC2-206ENST00000479105 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
RFC2-206ENST00000479105 POLA1P09884 1462 aaPredicted RBP14.32□□□□□ -0.12
RFC2-206ENST00000479105 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
RFC2-206ENST00000479105 ABCA10Q8WWZ4 1543 aa14.3□□□□□ -0.12
RFC2-206ENST00000479105 WDR97A6NE52 1622 aa14.3□□□□□ -0.12
RFC2-206ENST00000479105 TNIKQ9UKE5 1360 aa14.29□□□□□ -0.12
RFC2-206ENST00000479105 CUX2O14529 1486 aa14.29□□□□□ -0.12
RFC2-206ENST00000479105 MRC2Q9UBG0 1479 aa14.29□□□□□ -0.12
RFC2-206ENST00000479105 MIER1Q8N108 512 aa14.28□□□□□ -0.12
RFC2-206ENST00000479105 PRXQ9BXM0 1461 aa14.27□□□□□ -0.12
RFC2-206ENST00000479105 WDR62O43379 1518 aa14.24□□□□□ -0.13
RFC2-206ENST00000479105 PLCD3Q8N3E9 789 aa14.23□□□□□ -0.13
RFC2-206ENST00000479105 RAD54L2Q9Y4B4 1467 aa14.23□□□□□ -0.13
RFC2-206ENST00000479105 RAPGEF2Q9Y4G8 1499 aa14.23□□□□□ -0.13
RFC2-206ENST00000479105 PLEKHG5O94827 1062 aa14.22□□□□□ -0.13
RFC2-206ENST00000479105 VASPP50552 380 aaPredicted RBP14.22□□□□□ -0.13
RFC2-206ENST00000479105 FARP1Q9Y4F1 1045 aaPredicted RBP14.22□□□□□ -0.13
RFC2-206ENST00000479105 ABCA5Q8WWZ7 1642 aa14.21□□□□□ -0.13
RFC2-206ENST00000479105 CEP162Q5TB80 1403 aa14.21□□□□□ -0.13
RFC2-206ENST00000479105 TARBP1Q13395 1621 aaKnown RBP14.2□□□□□ -0.14
RFC2-206ENST00000479105 THOC2Q8NI27 1593 aaKnown RBP14.19□□□□□ -0.14
RFC2-206ENST00000479105 CUL7Q14999 1698 aa14.19□□□□□ -0.14
RFC2-206ENST00000479105 ERCC6Q03468 1493 aa14.18□□□□□ -0.14
RFC2-206ENST00000479105 UBTFP17480 764 aaKnown RBP14.18□□□□□ -0.14
RFC2-206ENST00000479105 IGF1RP08069 1367 aa14.18□□□□□ -0.14
RFC2-206ENST00000479105 MNX1P50219 401 aaPredicted RBP14.17□□□□□ -0.14
RFC2-206ENST00000479105 IFT140Q96RY7 1462 aa14.12□□□□□ -0.15
RFC2-206ENST00000479105 CARMIL1Q5VZK9 1371 aa14.11□□□□□ -0.15
RFC2-206ENST00000479105 NPM1P06748 294 aaKnown RBP eCLIP14.11□□□□□ -0.15
RFC2-206ENST00000479105 ZBTB47Q9UFB7 747 aaPredicted RBP14.11□□□□□ -0.15
RFC2-206ENST00000479105 GAPVD1Q14C86 1478 aa14.11□□□□□ -0.15
RFC2-206ENST00000479105 PBRM1Q86U86 1689 aa14.1□□□□□ -0.15
RFC2-206ENST00000479105 CLIP1P30622 1438 aa14.09□□□□□ -0.15
RFC2-206ENST00000479105 HAX1O00165 279 aa14.08□□□□□ -0.16
RFC2-206ENST00000479105 TDRD9Q8NDG6 1382 aaKnown RBP14.06□□□□□ -0.16
RFC2-206ENST00000479105 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
RFC2-206ENST00000479105 CTTNBP2Q8WZ74 1663 aa14.04□□□□□ -0.16
RFC2-206ENST00000479105 EIF4G3O43432 1585 aaKnown RBP14.01□□□□□ -0.17
RFC2-206ENST00000479105 ADAMTS12P58397 1594 aa14.01□□□□□ -0.17
RFC2-206ENST00000479105 GRIN2BQ13224 1484 aa14.01□□□□□ -0.17
RFC2-206ENST00000479105 IFNLR1Q8IU57 520 aaPredicted RBP14.01□□□□□ -0.17
RFC2-206ENST00000479105 KLHL34Q8N239 644 aa14.01□□□□□ -0.17
RFC2-206ENST00000479105 VPS8Q8N3P4 1428 aa13.99□□□□□ -0.17
RFC2-206ENST00000479105 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.171e-6■■■□□ 18.3
RFC2-206ENST00000479105 ZNF608Q9ULD9 1512 aaPredicted RBP13.98□□□□□ -0.17
RFC2-206ENST00000479105 FHAD1B1AJZ9 1412 aa13.98□□□□□ -0.17
RFC2-206ENST00000479105 CD44P16070 742 aaKnown RBP13.97□□□□□ -0.17
RFC2-206ENST00000479105 ARAP1Q96P48 1450 aa13.96□□□□□ -0.17
RFC2-206ENST00000479105 ARHGAP35Q9NRY4 1499 aa13.94□□□□□ -0.18
RFC2-206ENST00000479105 EVX2Q03828 476 aa13.94□□□□□ -0.18
RFC2-206ENST00000479105 EFCAB5A4FU69 1503 aa13.94□□□□□ -0.18
RFC2-206ENST00000479105 NUBP1P53384 320 aa13.92□□□□□ -0.18
RFC2-206ENST00000479105 MAGI1Q96QZ7 1491 aaPredicted RBP13.92□□□□□ -0.18
RFC2-206ENST00000479105 TRIM26Q12899 539 aaPredicted RBP13.91□□□□□ -0.18
RFC2-206ENST00000479105 PAK3O75914 559 aaPredicted RBP13.9□□□□□ -0.18
RFC2-206ENST00000479105 SNAPC4Q5SXM2 1469 aa13.9□□□□□ -0.18
RFC2-206ENST00000479105 RASEFQ8IZ41 740 aa13.89□□□□□ -0.19
RFC2-206ENST00000479105 SAMD9Q5K651 1589 aa13.88□□□□□ -0.19
RFC2-206ENST00000479105 SPOCK2Q92563 424 aa13.87□□□□□ -0.19
RFC2-206ENST00000479105 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
RFC2-206ENST00000479105 RANGAP1P46060 587 aaPredicted RBP13.86□□□□□ -0.19
RFC2-206ENST00000479105 PCGF6Q9BYE7 350 aa13.85□□□□□ -0.19
RFC2-206ENST00000479105 TSPYL2Q9H2G4 693 aaPredicted RBP13.85□□□□□ -0.19
RFC2-206ENST00000479105 SYNJ2O15056 1496 aa13.85□□□□□ -0.19
RFC2-206ENST00000479105 GRIN2AQ12879 1464 aa13.85□□□□□ -0.19
RFC2-206ENST00000479105 IQGAP2Q13576 1575 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms