RNA–Protein interactions for RNA: ENST00000477149.5

RAB17-210, Transcript of RAB17, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB17, Length 3,211 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB17-210ENST00000477149 PRXQ9BXM0 1461 aa19.07■□□□□ 0.64
RAB17-210ENST00000477149 ATP1B4Q9UN42 357 aaPredicted RBP19.06■□□□□ 0.64
RAB17-210ENST00000477149 KANK4Q5T7N3 995 aaPredicted RBP19.04■□□□□ 0.64
RAB17-210ENST00000477149 FANCD2Q9BXW9 1451 aa19.04■□□□□ 0.64
RAB17-210ENST00000477149 FGD5Q6ZNL6 1462 aa19.04■□□□□ 0.64
RAB17-210ENST00000477149 IGF1RP08069 1367 aa19.02■□□□□ 0.63
RAB17-210ENST00000477149 RAD54L2Q9Y4B4 1467 aa19■□□□□ 0.63
RAB17-210ENST00000477149 CDK11AQ9UQ88 783 aaPredicted RBP18.97■□□□□ 0.63
RAB17-210ENST00000477149 CARMIL1Q5VZK9 1371 aa18.96■□□□□ 0.63
RAB17-210ENST00000477149 TRIM52Q96A61 297 aa18.96■□□□□ 0.63
RAB17-210ENST00000477149 ARAP1Q96P48 1450 aa18.96■□□□□ 0.63
RAB17-210ENST00000477149 NBR1Q14596 966 aa18.96■□□□□ 0.63
RAB17-210ENST00000477149 CCDC136Q96JN2 1154 aa18.94■□□□□ 0.62
RAB17-210ENST00000477149 MYT1LQ9UL68 1186 aa18.93■□□□□ 0.62
RAB17-210ENST00000477149 ERICH3Q5RHP9 1530 aa18.9■□□□□ 0.62
RAB17-210ENST00000477149 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.62
RAB17-210ENST00000477149 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
RAB17-210ENST00000477149 IRX6P78412 446 aaPredicted RBP18.87■□□□□ 0.61
RAB17-210ENST00000477149 ARHGAP35Q9NRY4 1499 aa18.85■□□□□ 0.61
RAB17-210ENST00000477149 RTN4Q9NQC3 1192 aaKnown RBP18.85■□□□□ 0.61
RAB17-210ENST00000477149 DDX10Q13206 875 aaKnown RBP18.84■□□□□ 0.61
RAB17-210ENST00000477149 FANCIQ9NVI1 1328 aa18.84■□□□□ 0.61
RAB17-210ENST00000477149 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
RAB17-210ENST00000477149 TOPBP1Q92547 1522 aa18.83■□□□□ 0.6
RAB17-210ENST00000477149 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.79■□□□□ 0.6
RAB17-210ENST00000477149 RTL5Q5HYW3 569 aaPredicted RBP18.76■□□□□ 0.59
RAB17-210ENST00000477149 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
RAB17-210ENST00000477149 URB2Q14146 1524 aaKnown RBP18.75■□□□□ 0.59
RAB17-210ENST00000477149 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
RAB17-210ENST00000477149 FHOD3Q2V2M9 1422 aa18.72■□□□□ 0.59
RAB17-210ENST00000477149 FAM50AQ14320 339 aaKnown RBP18.72■□□□□ 0.59
RAB17-210ENST00000477149 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.58
RAB17-210ENST00000477149 ARID3CA6NKF2 412 aa18.69■□□□□ 0.58
RAB17-210ENST00000477149 DHX57Q6P158 1386 aaKnown RBP18.69■□□□□ 0.58
RAB17-210ENST00000477149 ABCA10Q8WWZ4 1543 aa18.67■□□□□ 0.58
RAB17-210ENST00000477149 ANP32CO43423 234 aa18.65■□□□□ 0.58
RAB17-210ENST00000477149 NOP58Q9Y2X3 529 aaKnown RBP18.65■□□□□ 0.58
RAB17-210ENST00000477149 EIF5BO60841 1220 aaKnown RBP18.64■□□□□ 0.58
RAB17-210ENST00000477149 IL27Q8NEV9 243 aa18.64■□□□□ 0.58
RAB17-210ENST00000477149 HIRIP3Q9BW71 556 aaPredicted RBP18.64■□□□□ 0.58
RAB17-210ENST00000477149 ERICH6BQ5W0A0 696 aa18.64■□□□□ 0.57
RAB17-210ENST00000477149 LAMC3Q9Y6N6 1575 aa18.63■□□□□ 0.57
RAB17-210ENST00000477149 CCNB3Q8WWL7 1395 aa18.62■□□□□ 0.57
RAB17-210ENST00000477149 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
RAB17-210ENST00000477149 AQRO60306 1485 aaKnown RBP eCLIP18.59■□□□□ 0.572e-7■■■■□ 21.7
RAB17-210ENST00000477149 HNRNPUQ00839 825 aaKnown RBP eCLIP18.59■□□□□ 0.57
RAB17-210ENST00000477149 PHLDB1Q86UU1 1377 aa18.56■□□□□ 0.56
RAB17-210ENST00000477149 PAK3O75914 559 aaPredicted RBP18.56■□□□□ 0.56
RAB17-210ENST00000477149 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
RAB17-210ENST00000477149 B4GALNT3Q6L9W6 998 aa18.52■□□□□ 0.56
RAB17-210ENST00000477149 FHAD1B1AJZ9 1412 aa18.52■□□□□ 0.55
RAB17-210ENST00000477149 RRBP1Q9P2E9 1410 aaKnown RBP18.51■□□□□ 0.55
RAB17-210ENST00000477149 FBLN2P98095 1184 aa18.51■□□□□ 0.55
RAB17-210ENST00000477149 UBE2Q2Q8WVN8 375 aa18.5■□□□□ 0.55
RAB17-210ENST00000477149 LRRC9Q6ZRR7 1453 aa18.5■□□□□ 0.55
RAB17-210ENST00000477149 PCF11O94913 1555 aaKnown RBP18.49■□□□□ 0.55
RAB17-210ENST00000477149 TIAM1Q13009 1591 aa18.48■□□□□ 0.55
RAB17-210ENST00000477149 ANP32AP39687 249 aaKnown RBP18.48■□□□□ 0.55
RAB17-210ENST00000477149 ZBTB47Q9UFB7 747 aaPredicted RBP18.47■□□□□ 0.55
RAB17-210ENST00000477149 PPP4R2Q9NY27 417 aa18.47■□□□□ 0.55
RAB17-210ENST00000477149 MTUS2Q5JR59 1369 aa18.45■□□□□ 0.54
RAB17-210ENST00000477149 RAB3GAP2Q9H2M9 1393 aa18.45■□□□□ 0.54
RAB17-210ENST00000477149 CCER2I3L3R5 266 aa18.44■□□□□ 0.54
RAB17-210ENST00000477149 ZNF608Q9ULD9 1512 aaPredicted RBP18.43■□□□□ 0.54
RAB17-210ENST00000477149 ERCC6Q03468 1493 aa18.4■□□□□ 0.54
RAB17-210ENST00000477149 SIN3AQ96ST3 1273 aa18.4■□□□□ 0.54
RAB17-210ENST00000477149 CUL7Q14999 1698 aa18.4■□□□□ 0.54
RAB17-210ENST00000477149 MRC2Q9UBG0 1479 aa18.38■□□□□ 0.53
RAB17-210ENST00000477149 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
RAB17-210ENST00000477149 FMN1Q68DA7 1419 aa18.37■□□□□ 0.53
RAB17-210ENST00000477149 CASKIN1Q8WXD9 1431 aa18.37■□□□□ 0.53
RAB17-210ENST00000477149 NPM2Q86SE8 214 aaKnown RBP18.37■□□□□ 0.53
RAB17-210ENST00000477149 CHIC2Q9UKJ5 165 aa18.36■□□□□ 0.53
RAB17-210ENST00000477149 PPP1R15AO75807 674 aaPredicted RBP18.36■□□□□ 0.53
RAB17-210ENST00000477149 WDR97A6NE52 1622 aa18.34■□□□□ 0.53
RAB17-210ENST00000477149 TARBP1Q13395 1621 aaKnown RBP18.34■□□□□ 0.53
RAB17-210ENST00000477149 LAS1LQ9Y4W2 734 aaKnown RBP18.34■□□□□ 0.53
RAB17-210ENST00000477149 FYCO1Q9BQS8 1478 aa18.33■□□□□ 0.53
RAB17-210ENST00000477149 IPO9Q96P70 1041 aaKnown RBP18.32■□□□□ 0.52
RAB17-210ENST00000477149 EFCAB5A4FU69 1503 aa18.32■□□□□ 0.52
RAB17-210ENST00000477149 SETD5Q9C0A6 1442 aa18.31■□□□□ 0.52
RAB17-210ENST00000477149 CHMP7Q8WUX9 453 aaPredicted RBP18.31■□□□□ 0.52
RAB17-210ENST00000477149 NEFMP07197 916 aa18.31■□□□□ 0.52
RAB17-210ENST00000477149 CTTNBP2Q8WZ74 1663 aa18.3■□□□□ 0.52
RAB17-210ENST00000477149 SNAPC4Q5SXM2 1469 aa18.29■□□□□ 0.52
RAB17-210ENST00000477149 RRP7BPQ9NSQ0 103 aa18.28■□□□□ 0.52
RAB17-210ENST00000477149 MAP3K1Q13233 1512 aa18.28■□□□□ 0.52
RAB17-210ENST00000477149 MAPKBP1O60336 1514 aa18.28■□□□□ 0.52
RAB17-210ENST00000477149 GRIN2BQ13224 1484 aa18.27■□□□□ 0.52
RAB17-210ENST00000477149 FAM9BQ8IZU0 186 aa18.24■□□□□ 0.51
RAB17-210ENST00000477149 FGD6Q6ZV73 1430 aa18.24■□□□□ 0.51
RAB17-210ENST00000477149 BRPF3Q9ULD4 1205 aa18.22■□□□□ 0.51
RAB17-210ENST00000477149 NCOA2Q15596 1464 aa18.21■□□□□ 0.51
RAB17-210ENST00000477149 CFAP43Q8NDM7 1665 aa18.21■□□□□ 0.51
RAB17-210ENST00000477149 PKNOX2Q96KN3 472 aa18.21■□□□□ 0.51
RAB17-210ENST00000477149 TIMELESSQ9UNS1 1208 aa18.21■□□□□ 0.51
RAB17-210ENST00000477149 IFT140Q96RY7 1462 aa18.2■□□□□ 0.5
RAB17-210ENST00000477149 PTPRKQ15262 1439 aa18.2■□□□□ 0.5
RAB17-210ENST00000477149 CDK13Q14004 1512 aaKnown RBP18.19■□□□□ 0.5
RAB17-210ENST00000477149 SAMD9Q5K651 1589 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms