RNA–Protein interactions for RNA: ENST00000475763.5

LSG1-207, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 3

Gene LSG1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-207ENST00000475763 BIVM-ERCC5R4GMW8 1640 aa18.67■□□□□ 0.58
LSG1-207ENST00000475763 SPDYE2BA6NHP3 402 aa18.65■□□□□ 0.58
LSG1-207ENST00000475763 SPDYE6P0CI01 402 aa18.65■□□□□ 0.58
LSG1-207ENST00000475763 SPDYE2Q495Y8 402 aa18.65■□□□□ 0.58
LSG1-207ENST00000475763 CEP164Q9UPV0 1460 aa18.65■□□□□ 0.58
LSG1-207ENST00000475763 CUX1P39880 1505 aa18.62■□□□□ 0.57
LSG1-207ENST00000475763 KIF21AQ7Z4S6 1674 aa18.6■□□□□ 0.57
LSG1-207ENST00000475763 PITPNM1O00562 1244 aa18.57■□□□□ 0.56
LSG1-207ENST00000475763 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
LSG1-207ENST00000475763 TOPBP1Q92547 1522 aa18.51■□□□□ 0.55
LSG1-207ENST00000475763 ZNF692Q9BU19 519 aaPredicted RBP18.49■□□□□ 0.55
LSG1-207ENST00000475763 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
LSG1-207ENST00000475763 EEA1Q15075 1411 aa18.49■□□□□ 0.55
LSG1-207ENST00000475763 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.55
LSG1-207ENST00000475763 PIP4P2Q8N4L2 257 aa18.45■□□□□ 0.54
LSG1-207ENST00000475763 SSUH2Q9Y2M2 353 aa18.45■□□□□ 0.54
LSG1-207ENST00000475763 FGD5Q6ZNL6 1462 aa18.45■□□□□ 0.54
LSG1-207ENST00000475763 ERCC6Q03468 1493 aa18.44■□□□□ 0.54
LSG1-207ENST00000475763 SOGA1O94964 1423 aa18.4■□□□□ 0.54
LSG1-207ENST00000475763 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.54
LSG1-207ENST00000475763 WDR62O43379 1518 aa18.39■□□□□ 0.54
LSG1-207ENST00000475763 THOC2Q8NI27 1593 aaKnown RBP18.36■□□□□ 0.53
LSG1-207ENST00000475763 FXR2P51116 673 aaKnown RBP eCLIP18.35■□□□□ 0.53
LSG1-207ENST00000475763 KIF27Q86VH2 1401 aa18.33■□□□□ 0.53
LSG1-207ENST00000475763 FAM9AQ8IZU1 332 aaPredicted RBP18.33■□□□□ 0.52
LSG1-207ENST00000475763 RUSC2Q8N2Y8 1516 aa18.33■□□□□ 0.52
LSG1-207ENST00000475763 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.52
LSG1-207ENST00000475763 WDR97A6NE52 1622 aa18.3■□□□□ 0.52
LSG1-207ENST00000475763 CLEC11AQ9Y240 323 aa18.29■□□□□ 0.52
LSG1-207ENST00000475763 CUX2O14529 1486 aa18.28■□□□□ 0.52
LSG1-207ENST00000475763 SPDYE1Q8NFV5 336 aaPredicted RBP18.28■□□□□ 0.52
LSG1-207ENST00000475763 RAD54L2Q9Y4B4 1467 aa18.27■□□□□ 0.52
LSG1-207ENST00000475763 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.51
LSG1-207ENST00000475763 IFT140Q96RY7 1462 aa18.23■□□□□ 0.51
LSG1-207ENST00000475763 KIF21BO75037 1637 aa18.23■□□□□ 0.51
LSG1-207ENST00000475763 ABCA5Q8WWZ7 1642 aa18.2■□□□□ 0.5
LSG1-207ENST00000475763 LOC105371045A0A1W2PR82 267 aa18.19■□□□□ 0.5
LSG1-207ENST00000475763 GOLGA3Q08378 1498 aa18.16■□□□□ 0.5
LSG1-207ENST00000475763 PRXQ9BXM0 1461 aa18.16■□□□□ 0.5
LSG1-207ENST00000475763 IGF1RP08069 1367 aa18.16■□□□□ 0.5
LSG1-207ENST00000475763 ERICH3Q5RHP9 1530 aa18.15■□□□□ 0.5
LSG1-207ENST00000475763 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.49
LSG1-207ENST00000475763 TDRD9Q8NDG6 1382 aaKnown RBP18.11■□□□□ 0.49
LSG1-207ENST00000475763 CUL7Q14999 1698 aa18.11■□□□□ 0.49
LSG1-207ENST00000475763 PRKAR2AP13861 404 aaKnown RBP18.09■□□□□ 0.49
LSG1-207ENST00000475763 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
LSG1-207ENST00000475763 RAPGEF2Q9Y4G8 1499 aa18.07■□□□□ 0.48
LSG1-207ENST00000475763 CARMIL1Q5VZK9 1371 aa18.06■□□□□ 0.48
LSG1-207ENST00000475763 TNIKQ9UKE5 1360 aa18.06■□□□□ 0.48
LSG1-207ENST00000475763 GRIN2BQ13224 1484 aa18.05■□□□□ 0.48
LSG1-207ENST00000475763 ZNF608Q9ULD9 1512 aaPredicted RBP18.04■□□□□ 0.48
LSG1-207ENST00000475763 HAX1O00165 279 aa18.04■□□□□ 0.48
LSG1-207ENST00000475763 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
LSG1-207ENST00000475763 AQRO60306 1485 aaKnown RBP eCLIP18.03■□□□□ 0.48
LSG1-207ENST00000475763 UBTFP17480 764 aaKnown RBP18■□□□□ 0.47
LSG1-207ENST00000475763 SP7Q8TDD2 431 aaPredicted RBP18■□□□□ 0.47
LSG1-207ENST00000475763 PRR29P0C7W0 189 aa17.99■□□□□ 0.47
LSG1-207ENST00000475763 SPDYE4A6NLX3 237 aa17.98■□□□□ 0.47
LSG1-207ENST00000475763 CHADLQ6NUI6 762 aa17.96■□□□□ 0.47
LSG1-207ENST00000475763 FHAD1B1AJZ9 1412 aa17.96■□□□□ 0.47
LSG1-207ENST00000475763 ADAMTS12P58397 1594 aa17.96■□□□□ 0.46
LSG1-207ENST00000475763 MAGI1Q96QZ7 1491 aaPredicted RBP17.94■□□□□ 0.46
LSG1-207ENST00000475763 CEP162Q5TB80 1403 aa17.91■□□□□ 0.46
LSG1-207ENST00000475763 EVX2Q03828 476 aa17.91■□□□□ 0.46
LSG1-207ENST00000475763 SNAPC4Q5SXM2 1469 aa17.9■□□□□ 0.46
LSG1-207ENST00000475763 CTTNBP2Q8WZ74 1663 aa17.87■□□□□ 0.45
LSG1-207ENST00000475763 SYNJ2O15056 1496 aa17.84■□□□□ 0.45
LSG1-207ENST00000475763 CLIP1P30622 1438 aa17.83■□□□□ 0.45
LSG1-207ENST00000475763 GRIN2AQ12879 1464 aa17.81■□□□□ 0.44
LSG1-207ENST00000475763 C19orf67A6NJJ6 358 aa17.75■□□□□ 0.43
LSG1-207ENST00000475763 CHMP7Q8WUX9 453 aaPredicted RBP17.75■□□□□ 0.43
LSG1-207ENST00000475763 EFCAB5A4FU69 1503 aa17.73■□□□□ 0.43
LSG1-207ENST00000475763 IQGAP2Q13576 1575 aa17.72■□□□□ 0.43
LSG1-207ENST00000475763 KIAA0586Q9BVV6 1533 aa17.72■□□□□ 0.43
LSG1-207ENST00000475763 ARHGAP35Q9NRY4 1499 aa17.71■□□□□ 0.43
LSG1-207ENST00000475763 NUP160Q12769 1436 aa17.71■□□□□ 0.43
LSG1-207ENST00000475763 STAG3Q9UJ98 1225 aa17.7■□□□□ 0.42
LSG1-207ENST00000475763 CHD1O14646 1710 aa17.68■□□□□ 0.42
LSG1-207ENST00000475763 CEP170Q5SW79 1584 aa17.68■□□□□ 0.42
LSG1-207ENST00000475763 VPS8Q8N3P4 1428 aa17.67■□□□□ 0.42
LSG1-207ENST00000475763 FARP1Q9Y4F1 1045 aaPredicted RBP17.67■□□□□ 0.42
LSG1-207ENST00000475763 ARAP1Q96P48 1450 aa17.67■□□□□ 0.42
LSG1-207ENST00000475763 SAMD9Q5K651 1589 aa17.66■□□□□ 0.42
LSG1-207ENST00000475763 UGGT2Q9NYU1 1516 aa17.65■□□□□ 0.42
LSG1-207ENST00000475763 RANGAP1P46060 587 aaPredicted RBP17.64■□□□□ 0.41
LSG1-207ENST00000475763 CREBZFQ9NS37 354 aa17.62■□□□□ 0.41
LSG1-207ENST00000475763 PROM2Q8N271 834 aa17.56■□□□□ 0.4
LSG1-207ENST00000475763 FMN1Q68DA7 1419 aa17.55■□□□□ 0.4
LSG1-207ENST00000475763 FHOD3Q2V2M9 1422 aa17.54■□□□□ 0.4
LSG1-207ENST00000475763 KIAA0556O60303 1618 aa17.53■□□□□ 0.4
LSG1-207ENST00000475763 DISP1Q96F81 1524 aa17.52■□□□□ 0.4
LSG1-207ENST00000475763 CD44P16070 742 aaKnown RBP17.51■□□□□ 0.39
LSG1-207ENST00000475763 JPH4Q96JJ6 628 aa17.51■□□□□ 0.39
LSG1-207ENST00000475763 CLASP1Q7Z460 1538 aa17.51■□□□□ 0.39
LSG1-207ENST00000475763 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
LSG1-207ENST00000475763 CARMIL2Q6F5E8 1435 aa17.5■□□□□ 0.39
LSG1-207ENST00000475763 P3H3Q8IVL6 736 aa17.49■□□□□ 0.39
LSG1-207ENST00000475763 FYCO1Q9BQS8 1478 aa17.49■□□□□ 0.39
LSG1-207ENST00000475763 CASKIN1Q8WXD9 1431 aa17.47■□□□□ 0.39
LSG1-207ENST00000475763 MAP3K1Q13233 1512 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms