RNA–Protein interactions for RNA: ENST00000475460.6

COMMD3-BMI1-203, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 2

Gene COMMD3-BMI1, Length 508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-203ENST00000475460 FBLN2P98095 1184 aa13.84□□□□□ -0.19
COMMD3-BMI1-203ENST00000475460 TOPBP1Q92547 1522 aa13.83□□□□□ -0.2
COMMD3-BMI1-203ENST00000475460 ABCC8Q09428 1581 aa13.82□□□□□ -0.2
COMMD3-BMI1-203ENST00000475460 CYB5RLQ6IPT4 315 aa13.79□□□□□ -0.2
COMMD3-BMI1-203ENST00000475460 RIMBP3CA6NJZ7 1639 aa13.78□□□□□ -0.2
COMMD3-BMI1-203ENST00000475460 RIMBP3BA6NNM3 1639 aa13.78□□□□□ -0.2
COMMD3-BMI1-203ENST00000475460 RIMBP3Q9UFD9 1639 aa13.78□□□□□ -0.2
COMMD3-BMI1-203ENST00000475460 ARHGEF11O15085 1522 aa13.77□□□□□ -0.21
COMMD3-BMI1-203ENST00000475460 AQRO60306 1485 aaKnown RBP eCLIP13.76□□□□□ -0.216e-7■■■■□ 23.4
COMMD3-BMI1-203ENST00000475460 PRDM2Q13029 1718 aa13.75□□□□□ -0.21
COMMD3-BMI1-203ENST00000475460 DNMBPQ6XZF7 1577 aa13.74□□□□□ -0.21
COMMD3-BMI1-203ENST00000475460 EIF4G3O43432 1585 aaKnown RBP13.71□□□□□ -0.21
COMMD3-BMI1-203ENST00000475460 TDRD9Q8NDG6 1382 aaKnown RBP13.69□□□□□ -0.22
COMMD3-BMI1-203ENST00000475460 POLA1P09884 1462 aaPredicted RBP13.68□□□□□ -0.22
COMMD3-BMI1-203ENST00000475460 SOGA1O94964 1423 aa13.68□□□□□ -0.22
COMMD3-BMI1-203ENST00000475460 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
COMMD3-BMI1-203ENST00000475460 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
COMMD3-BMI1-203ENST00000475460 TARBP1Q13395 1621 aaKnown RBP13.66□□□□□ -0.22
COMMD3-BMI1-203ENST00000475460 CHMP7Q8WUX9 453 aaPredicted RBP13.65□□□□□ -0.22
COMMD3-BMI1-203ENST00000475460 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
COMMD3-BMI1-203ENST00000475460 CHD1O14646 1710 aa13.59□□□□□ -0.23
COMMD3-BMI1-203ENST00000475460 SNAPC4Q5SXM2 1469 aa13.59□□□□□ -0.23
COMMD3-BMI1-203ENST00000475460 FGD5Q6ZNL6 1462 aa13.59□□□□□ -0.23
COMMD3-BMI1-203ENST00000475460 PROM2Q8N271 834 aa13.57□□□□□ -0.24
COMMD3-BMI1-203ENST00000475460 GRIN2BQ13224 1484 aa13.55□□□□□ -0.24
COMMD3-BMI1-203ENST00000475460 MAGI1Q96QZ7 1491 aaPredicted RBP13.54□□□□□ -0.24
COMMD3-BMI1-203ENST00000475460 CUX1P39880 1505 aa13.54□□□□□ -0.24
COMMD3-BMI1-203ENST00000475460 WDR97A6NE52 1622 aa13.51□□□□□ -0.25
COMMD3-BMI1-203ENST00000475460 SYNJ1O43426 1573 aa13.5□□□□□ -0.25
COMMD3-BMI1-203ENST00000475460 SYNJ2O15056 1496 aa13.5□□□□□ -0.25
COMMD3-BMI1-203ENST00000475460 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
COMMD3-BMI1-203ENST00000475460 GAPVD1Q14C86 1478 aa13.48□□□□□ -0.25
COMMD3-BMI1-203ENST00000475460 SUPT5HO00267 1087 aaKnown RBP13.47□□□□□ -0.25
COMMD3-BMI1-203ENST00000475460 SPDYE2BA6NHP3 402 aa13.46□□□□□ -0.25
COMMD3-BMI1-203ENST00000475460 SPDYE6P0CI01 402 aa13.46□□□□□ -0.25
COMMD3-BMI1-203ENST00000475460 SPDYE2Q495Y8 402 aa13.46□□□□□ -0.25
COMMD3-BMI1-203ENST00000475460 ABCA10Q8WWZ4 1543 aa13.41□□□□□ -0.26
COMMD3-BMI1-203ENST00000475460 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
COMMD3-BMI1-203ENST00000475460 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
COMMD3-BMI1-203ENST00000475460 SSUH2Q9Y2M2 353 aa13.4□□□□□ -0.26
COMMD3-BMI1-203ENST00000475460 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
COMMD3-BMI1-203ENST00000475460 GRIN2AQ12879 1464 aa13.36□□□□□ -0.27
COMMD3-BMI1-203ENST00000475460 PBRM1Q86U86 1689 aa13.34□□□□□ -0.27
COMMD3-BMI1-203ENST00000475460 ABCA5Q8WWZ7 1642 aa13.34□□□□□ -0.27
COMMD3-BMI1-203ENST00000475460 FHAD1B1AJZ9 1412 aa13.31□□□□□ -0.28
COMMD3-BMI1-203ENST00000475460 NUP160Q12769 1436 aa13.31□□□□□ -0.28
COMMD3-BMI1-203ENST00000475460 FBXO3Q9UK99 471 aa13.29□□□□□ -0.28
COMMD3-BMI1-203ENST00000475460 ERCC6L2Q5T890 1561 aa13.28□□□□□ -0.28
COMMD3-BMI1-203ENST00000475460 CEP170Q5SW79 1584 aa13.28□□□□□ -0.28
COMMD3-BMI1-203ENST00000475460 RTN4Q9NQC3 1192 aaKnown RBP13.27□□□□□ -0.29
COMMD3-BMI1-203ENST00000475460 ADAMTS12P58397 1594 aa13.27□□□□□ -0.29
COMMD3-BMI1-203ENST00000475460 JPH4Q96JJ6 628 aa13.26□□□□□ -0.29
COMMD3-BMI1-203ENST00000475460 TOP2BQ02880 1626 aa13.25□□□□□ -0.29
COMMD3-BMI1-203ENST00000475460 PRG4Q92954 1404 aaPredicted RBP13.24□□□□□ -0.29
COMMD3-BMI1-203ENST00000475460 ERICH3Q5RHP9 1530 aa13.23□□□□□ -0.29
COMMD3-BMI1-203ENST00000475460 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
COMMD3-BMI1-203ENST00000475460 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
COMMD3-BMI1-203ENST00000475460 AKT1S1Q96B36 256 aa13.21□□□□□ -0.29
COMMD3-BMI1-203ENST00000475460 BIVM-ERCC5R4GMW8 1640 aa13.21□□□□□ -0.3
COMMD3-BMI1-203ENST00000475460 SHROOM2Q13796 1616 aa13.19□□□□□ -0.3
COMMD3-BMI1-203ENST00000475460 FAM69CQ0P6D2 419 aa13.18□□□□□ -0.3
COMMD3-BMI1-203ENST00000475460 AMER1Q5JTC6 1135 aaPredicted RBP13.16□□□□□ -0.3
COMMD3-BMI1-203ENST00000475460 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
COMMD3-BMI1-203ENST00000475460 IGF1RP08069 1367 aa13.11□□□□□ -0.31
COMMD3-BMI1-203ENST00000475460 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
COMMD3-BMI1-203ENST00000475460 KIF27Q86VH2 1401 aa13.09□□□□□ -0.31
COMMD3-BMI1-203ENST00000475460 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
COMMD3-BMI1-203ENST00000475460 KIAA0586Q9BVV6 1533 aa13.08□□□□□ -0.31
COMMD3-BMI1-203ENST00000475460 RUSC2Q8N2Y8 1516 aa13.07□□□□□ -0.32
COMMD3-BMI1-203ENST00000475460 TTBK1Q5TCY1 1321 aaPredicted RBP13.07□□□□□ -0.32
COMMD3-BMI1-203ENST00000475460 MAPKBP1O60336 1514 aa13.05□□□□□ -0.32
COMMD3-BMI1-203ENST00000475460 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
COMMD3-BMI1-203ENST00000475460 PTPRGP23470 1445 aa13.05□□□□□ -0.32
COMMD3-BMI1-203ENST00000475460 SPDYE1Q8NFV5 336 aaPredicted RBP13.04□□□□□ -0.32
COMMD3-BMI1-203ENST00000475460 KIF13AQ9H1H9 1805 aa13.04□□□□□ -0.32
COMMD3-BMI1-203ENST00000475460 CARMIL1Q5VZK9 1371 aa13.03□□□□□ -0.32
COMMD3-BMI1-203ENST00000475460 ADCY10Q96PN6 1610 aa13.02□□□□□ -0.33
COMMD3-BMI1-203ENST00000475460 DIP2BQ9P265 1576 aa12.99□□□□□ -0.33
COMMD3-BMI1-203ENST00000475460 CARMIL2Q6F5E8 1435 aa12.99□□□□□ -0.33
COMMD3-BMI1-203ENST00000475460 TNIKQ9UKE5 1360 aa12.98□□□□□ -0.33
COMMD3-BMI1-203ENST00000475460 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
COMMD3-BMI1-203ENST00000475460 CUL7Q14999 1698 aa12.97□□□□□ -0.33
COMMD3-BMI1-203ENST00000475460 CLEC11AQ9Y240 323 aa12.95□□□□□ -0.34
COMMD3-BMI1-203ENST00000475460 KDM6BO15054 1643 aa12.94□□□□□ -0.34
COMMD3-BMI1-203ENST00000475460 ABCC2Q92887 1545 aa12.93□□□□□ -0.34
COMMD3-BMI1-203ENST00000475460 ASXL2Q76L83 1435 aa12.93□□□□□ -0.34
COMMD3-BMI1-203ENST00000475460 PLB1Q6P1J6 1458 aa12.92□□□□□ -0.34
COMMD3-BMI1-203ENST00000475460 MIER1Q8N108 512 aa12.91□□□□□ -0.34
COMMD3-BMI1-203ENST00000475460 PLCD3Q8N3E9 789 aa12.91□□□□□ -0.34
COMMD3-BMI1-203ENST00000475460 UACAQ9BZF9 1416 aa12.9□□□□□ -0.34
COMMD3-BMI1-203ENST00000475460 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
COMMD3-BMI1-203ENST00000475460 UHRF1BP1LA0JNW5 1464 aa12.89□□□□□ -0.35
COMMD3-BMI1-203ENST00000475460 IQGAP2Q13576 1575 aa12.89□□□□□ -0.35
COMMD3-BMI1-203ENST00000475460 TSPOAP1O95153 1857 aa12.87□□□□□ -0.35
COMMD3-BMI1-203ENST00000475460 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
COMMD3-BMI1-203ENST00000475460 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
COMMD3-BMI1-203ENST00000475460 DISP1Q96F81 1524 aa12.86□□□□□ -0.35
COMMD3-BMI1-203ENST00000475460 RAPGEF2Q9Y4G8 1499 aa12.85□□□□□ -0.35
COMMD3-BMI1-203ENST00000475460 PLEKHG5O94827 1062 aa12.85□□□□□ -0.35
COMMD3-BMI1-203ENST00000475460 GLI2P10070 1586 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms