RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 SETD5Q9C0A6 1442 aa19.33■□□□□ 0.69
ARHGEF39-203ENST00000475323 PHLDB1Q86UU1 1377 aa19.33■□□□□ 0.69
ARHGEF39-203ENST00000475323 FKBP8Q14318 412 aa19.33■□□□□ 0.68
ARHGEF39-203ENST00000475323 P3H3Q8IVL6 736 aa19.33■□□□□ 0.68
ARHGEF39-203ENST00000475323 IGF1RP08069 1367 aa19.32■□□□□ 0.68
ARHGEF39-203ENST00000475323 TIAM1Q13009 1591 aa19.31■□□□□ 0.68
ARHGEF39-203ENST00000475323 ATP1B4Q9UN42 357 aaPredicted RBP19.3■□□□□ 0.68
ARHGEF39-203ENST00000475323 CFTRP13569 1480 aa19.3■□□□□ 0.68
ARHGEF39-203ENST00000475323 BCL11AQ9H165 835 aa19.29■□□□□ 0.68
ARHGEF39-203ENST00000475323 LRRC9Q6ZRR7 1453 aa19.27■□□□□ 0.68
ARHGEF39-203ENST00000475323 PPP1R15AO75807 674 aaPredicted RBP19.25■□□□□ 0.67
ARHGEF39-203ENST00000475323 TRIM52Q96A61 297 aa19.25■□□□□ 0.67
ARHGEF39-203ENST00000475323 CARMIL1Q5VZK9 1371 aa19.24■□□□□ 0.67
ARHGEF39-203ENST00000475323 ANP32EQ9BTT0 268 aa19.23■□□□□ 0.67
ARHGEF39-203ENST00000475323 CC2D2AQ9P2K1 1620 aa19.2■□□□□ 0.66
ARHGEF39-203ENST00000475323 MAP3K1Q13233 1512 aa19.19■□□□□ 0.66
ARHGEF39-203ENST00000475323 PCF11O94913 1555 aaKnown RBP19.14■□□□□ 0.65
ARHGEF39-203ENST00000475323 FGD5Q6ZNL6 1462 aa19.14■□□□□ 0.65
ARHGEF39-203ENST00000475323 FHOD3Q2V2M9 1422 aa19.12■□□□□ 0.65
ARHGEF39-203ENST00000475323 ANP32CO43423 234 aa19.12■□□□□ 0.65
ARHGEF39-203ENST00000475323 FHAD1B1AJZ9 1412 aa19.1■□□□□ 0.65
ARHGEF39-203ENST00000475323 NEFLP07196 543 aa19.1■□□□□ 0.65
ARHGEF39-203ENST00000475323 CADPSQ9ULU8 1353 aa19.09■□□□□ 0.65
ARHGEF39-203ENST00000475323 RBM19Q9Y4C8 960 aaKnown RBP19.08■□□□□ 0.65
ARHGEF39-203ENST00000475323 CFAP43Q8NDM7 1665 aa19.08■□□□□ 0.64
ARHGEF39-203ENST00000475323 CCER2I3L3R5 266 aa19.07■□□□□ 0.64
ARHGEF39-203ENST00000475323 TIMELESSQ9UNS1 1208 aa19.07■□□□□ 0.64
ARHGEF39-203ENST00000475323 PRDM2Q13029 1718 aa19.04■□□□□ 0.64
ARHGEF39-203ENST00000475323 TONSLQ96HA7 1378 aa19.02■□□□□ 0.64
ARHGEF39-203ENST00000475323 RAD54L2Q9Y4B4 1467 aa18.99■□□□□ 0.63
ARHGEF39-203ENST00000475323 PTPRKQ15262 1439 aa18.99■□□□□ 0.63
ARHGEF39-203ENST00000475323 IRX6P78412 446 aaPredicted RBP18.98■□□□□ 0.63
ARHGEF39-203ENST00000475323 FGD6Q6ZV73 1430 aa18.97■□□□□ 0.63
ARHGEF39-203ENST00000475323 CCDC18Q5T9S5 1454 aa18.96■□□□□ 0.63
ARHGEF39-203ENST00000475323 FYCO1Q9BQS8 1478 aa18.96■□□□□ 0.63
ARHGEF39-203ENST00000475323 CASKIN1Q8WXD9 1431 aa18.96■□□□□ 0.62
ARHGEF39-203ENST00000475323 HNRNPUQ00839 825 aaKnown RBP eCLIP18.94■□□□□ 0.62
ARHGEF39-203ENST00000475323 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.92■□□□□ 0.62
ARHGEF39-203ENST00000475323 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
ARHGEF39-203ENST00000475323 AQRO60306 1485 aaKnown RBP eCLIP18.91■□□□□ 0.62
ARHGEF39-203ENST00000475323 MTUS2Q5JR59 1369 aa18.91■□□□□ 0.62
ARHGEF39-203ENST00000475323 NESP48681 1621 aa18.9■□□□□ 0.62
ARHGEF39-203ENST00000475323 MSH5O43196 834 aa18.9■□□□□ 0.62
ARHGEF39-203ENST00000475323 UACAQ9BZF9 1416 aa18.89■□□□□ 0.61
ARHGEF39-203ENST00000475323 HFM1A2PYH4 1435 aa18.88■□□□□ 0.61
ARHGEF39-203ENST00000475323 ERICH6Q7L0X2 663 aa18.87■□□□□ 0.61
ARHGEF39-203ENST00000475323 PTPN23Q9H3S7 1636 aa18.87■□□□□ 0.61
ARHGEF39-203ENST00000475323 NAIPQ13075 1403 aa18.86■□□□□ 0.61
ARHGEF39-203ENST00000475323 EFCAB5A4FU69 1503 aa18.86■□□□□ 0.61
ARHGEF39-203ENST00000475323 POLA1P09884 1462 aaPredicted RBP18.85■□□□□ 0.61
ARHGEF39-203ENST00000475323 RRP7BPQ9NSQ0 103 aa18.85■□□□□ 0.61
ARHGEF39-203ENST00000475323 CHIC2Q9UKJ5 165 aa18.85■□□□□ 0.61
ARHGEF39-203ENST00000475323 SNAPC4Q5SXM2 1469 aa18.85■□□□□ 0.61
ARHGEF39-203ENST00000475323 WASHC2AQ641Q2 1341 aa18.85■□□□□ 0.61
ARHGEF39-203ENST00000475323 KDM5BQ9UGL1 1544 aa18.84■□□□□ 0.61
ARHGEF39-203ENST00000475323 CCDC184Q52MB2 194 aa18.84■□□□□ 0.61
ARHGEF39-203ENST00000475323 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
ARHGEF39-203ENST00000475323 HSPA5P11021 654 aaKnown RBP18.83■□□□□ 0.61
ARHGEF39-203ENST00000475323 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.6
ARHGEF39-203ENST00000475323 FMN1Q68DA7 1419 aa18.83■□□□□ 0.6
ARHGEF39-203ENST00000475323 LRRIQ1Q96JM4 1722 aa18.81■□□□□ 0.6
ARHGEF39-203ENST00000475323 NCOA2Q15596 1464 aa18.81■□□□□ 0.6
ARHGEF39-203ENST00000475323 CTTNBP2Q8WZ74 1663 aa18.81■□□□□ 0.6
ARHGEF39-203ENST00000475323 TOPBP1Q92547 1522 aa18.8■□□□□ 0.6
ARHGEF39-203ENST00000475323 MYOM3Q5VTT5 1437 aa18.78■□□□□ 0.6
ARHGEF39-203ENST00000475323 DNMBPQ6XZF7 1577 aa18.78■□□□□ 0.6
ARHGEF39-203ENST00000475323 FOXD1Q16676 465 aa18.75■□□□□ 0.59
ARHGEF39-203ENST00000475323 C11orf95C9JLR9 678 aaPredicted RBP18.75■□□□□ 0.59
ARHGEF39-203ENST00000475323 CDK11AQ9UQ88 783 aaPredicted RBP18.75■□□□□ 0.59
ARHGEF39-203ENST00000475323 TDRD9Q8NDG6 1382 aaKnown RBP18.74■□□□□ 0.59
ARHGEF39-203ENST00000475323 CUL7Q14999 1698 aa18.74■□□□□ 0.59
ARHGEF39-203ENST00000475323 DENND4BO75064 1496 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF39-203ENST00000475323 FAM9BQ8IZU0 186 aa18.72■□□□□ 0.59
ARHGEF39-203ENST00000475323 GRIN2BQ13224 1484 aa18.71■□□□□ 0.59
ARHGEF39-203ENST00000475323 EIF4G2P78344 907 aaKnown RBP eCLIP18.71■□□□□ 0.59
ARHGEF39-203ENST00000475323 ARID3CA6NKF2 412 aa18.7■□□□□ 0.58
ARHGEF39-203ENST00000475323 LAMC3Q9Y6N6 1575 aa18.7■□□□□ 0.58
ARHGEF39-203ENST00000475323 KDM6BO15054 1643 aa18.7■□□□□ 0.58
ARHGEF39-203ENST00000475323 MAGI3Q5TCQ9 1506 aa18.69■□□□□ 0.58
ARHGEF39-203ENST00000475323 L3MBTL2Q969R5 705 aa18.69■□□□□ 0.58
ARHGEF39-203ENST00000475323 SUPT6HQ7KZ85 1726 aaKnown RBP18.68■□□□□ 0.58
ARHGEF39-203ENST00000475323 SAMD9Q5K651 1589 aa18.67■□□□□ 0.58
ARHGEF39-203ENST00000475323 FANCIQ9NVI1 1328 aa18.67■□□□□ 0.58
ARHGEF39-203ENST00000475323 B4GALNT3Q6L9W6 998 aa18.66■□□□□ 0.58
ARHGEF39-203ENST00000475323 MPHOSPH9Q99550 1183 aa18.66■□□□□ 0.58
ARHGEF39-203ENST00000475323 PRKRIP1Q9H875 184 aaPredicted RBP18.65■□□□□ 0.58
ARHGEF39-203ENST00000475323 CNTLNQ9NXG0 1405 aa18.65■□□□□ 0.58
ARHGEF39-203ENST00000475323 URB2Q14146 1524 aaKnown RBP18.65■□□□□ 0.58
ARHGEF39-203ENST00000475323 UGGT2Q9NYU1 1516 aa18.65■□□□□ 0.58
ARHGEF39-203ENST00000475323 MRS2Q9HD23 443 aa18.64■□□□□ 0.58
ARHGEF39-203ENST00000475323 EHBP1L1Q8N3D4 1523 aa18.64■□□□□ 0.57
ARHGEF39-203ENST00000475323 CNGB1Q14028 1251 aaPredicted RBP18.64■□□□□ 0.57
ARHGEF39-203ENST00000475323 PPP4R2Q9NY27 417 aa18.64■□□□□ 0.57
ARHGEF39-203ENST00000475323 NBPF8Q3BBV2 869 aa18.62■□□□□ 0.57
ARHGEF39-203ENST00000475323 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
ARHGEF39-203ENST00000475323 CCDC7Q96M83 1385 aa18.61■□□□□ 0.57
ARHGEF39-203ENST00000475323 ARHGEF11O15085 1522 aa18.59■□□□□ 0.57
ARHGEF39-203ENST00000475323 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
ARHGEF39-203ENST00000475323 HECW1Q76N89 1606 aa18.58■□□□□ 0.57
ARHGEF39-203ENST00000475323 NCOA1Q15788 1441 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms