RNA–Protein interactions for RNA: ENST00000475057.5

SUPT3H-205, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

TSL 2

Gene SUPT3H, Length 1,377 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-205ENST00000475057 ARHGEF11O15085 1522 aa11.64□□□□□ -0.55
SUPT3H-205ENST00000475057 ZNF219Q9P2Y4 722 aaPredicted RBP11.62□□□□□ -0.55
SUPT3H-205ENST00000475057 TAOK2Q9UL54 1235 aa11.61□□□□□ -0.55
SUPT3H-205ENST00000475057 URB2Q14146 1524 aaKnown RBP11.61□□□□□ -0.55
SUPT3H-205ENST00000475057 WIZO95785 1651 aa11.58□□□□□ -0.56
SUPT3H-205ENST00000475057 ZNF608Q9ULD9 1512 aaPredicted RBP11.55□□□□□ -0.56
SUPT3H-205ENST00000475057 POTEDQ86YR6 584 aa11.54□□□□□ -0.56
SUPT3H-205ENST00000475057 CFTRP13569 1480 aa11.53□□□□□ -0.56
SUPT3H-205ENST00000475057 FBXO3Q9UK99 471 aa11.52□□□□□ -0.57
SUPT3H-205ENST00000475057 ARAP1Q96P48 1450 aa11.51□□□□□ -0.57
SUPT3H-205ENST00000475057 VSIG10Q8N0Z9 540 aa11.49□□□□□ -0.57
SUPT3H-205ENST00000475057 IFT140Q96RY7 1462 aa11.45□□□□□ -0.58
SUPT3H-205ENST00000475057 FBLN2P98095 1184 aa11.44□□□□□ -0.58
SUPT3H-205ENST00000475057 CHD1O14646 1710 aa11.44□□□□□ -0.58
SUPT3H-205ENST00000475057 TPRNQ4KMQ1 711 aa11.43□□□□□ -0.58
SUPT3H-205ENST00000475057 VASPP50552 380 aaPredicted RBP11.41□□□□□ -0.58
SUPT3H-205ENST00000475057 EIF4G3O43432 1585 aaKnown RBP11.41□□□□□ -0.58
SUPT3H-205ENST00000475057 SPDYE4A6NLX3 237 aa11.41□□□□□ -0.58
SUPT3H-205ENST00000475057 AQRO60306 1485 aaKnown RBP eCLIP11.4□□□□□ -0.58
SUPT3H-205ENST00000475057 TOPBP1Q92547 1522 aa11.38□□□□□ -0.59
SUPT3H-205ENST00000475057 PRDM2Q13029 1718 aa11.36□□□□□ -0.59
SUPT3H-205ENST00000475057 MYT1Q01538 1121 aa11.35□□□□□ -0.59
SUPT3H-205ENST00000475057 PKD2Q13563 968 aa11.34□□□□□ -0.59
SUPT3H-205ENST00000475057 IFNLR1Q8IU57 520 aaPredicted RBP11.34□□□□□ -0.59
SUPT3H-205ENST00000475057 TOP2AP11388 1531 aaKnown RBP11.33□□□□□ -0.6
SUPT3H-205ENST00000475057 KDM2AQ9Y2K7 1162 aa11.33□□□□□ -0.6
SUPT3H-205ENST00000475057 MKRN4PQ13434 485 aaPredicted RBP11.32□□□□□ -0.6
SUPT3H-205ENST00000475057 FAM9AQ8IZU1 332 aaPredicted RBP11.31□□□□□ -0.6
SUPT3H-205ENST00000475057 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
SUPT3H-205ENST00000475057 PROM2Q8N271 834 aa11.3□□□□□ -0.6
SUPT3H-205ENST00000475057 RNF39Q9H2S5 420 aa11.3□□□□□ -0.6
SUPT3H-205ENST00000475057 WRNQ14191 1432 aaPredicted RBP eCLIP11.3□□□□□ -0.6
SUPT3H-205ENST00000475057 CAPN15O75808 1086 aa11.28□□□□□ -0.6
SUPT3H-205ENST00000475057 POLA2Q14181 598 aa11.28□□□□□ -0.6
SUPT3H-205ENST00000475057 SPINK5Q9NQ38 1064 aaPredicted RBP11.28□□□□□ -0.6
SUPT3H-205ENST00000475057 CCDC88BA6NC98 1476 aa11.27□□□□□ -0.61
SUPT3H-205ENST00000475057 DNMBPQ6XZF7 1577 aa11.27□□□□□ -0.61
SUPT3H-205ENST00000475057 CLASP1Q7Z460 1538 aa11.26□□□□□ -0.61
SUPT3H-205ENST00000475057 TDRD9Q8NDG6 1382 aaKnown RBP11.26□□□□□ -0.61
SUPT3H-205ENST00000475057 ABCC8Q09428 1581 aa11.26□□□□□ -0.61
SUPT3H-205ENST00000475057 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
SUPT3H-205ENST00000475057 C1QBPQ07021 282 aaKnown RBP11.25□□□□□ -0.61
SUPT3H-205ENST00000475057 ZBTB12Q9Y330 459 aaPredicted RBP11.25□□□□□ -0.61
SUPT3H-205ENST00000475057 EEA1Q15075 1411 aa11.24□□□□□ -0.61
SUPT3H-205ENST00000475057 CHMP7Q8WUX9 453 aaPredicted RBP11.24□□□□□ -0.61
SUPT3H-205ENST00000475057 POLA1P09884 1462 aaPredicted RBP11.24□□□□□ -0.61
SUPT3H-205ENST00000475057 SNAPC4Q5SXM2 1469 aa11.23□□□□□ -0.61
SUPT3H-205ENST00000475057 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.22□□□□□ -0.61
SUPT3H-205ENST00000475057 CENPBP07199 599 aaPredicted RBP11.21□□□□□ -0.61
SUPT3H-205ENST00000475057 ILDR1Q86SU0 546 aaPredicted RBP11.21□□□□□ -0.61
SUPT3H-205ENST00000475057 BBXQ8WY36 941 aaPredicted RBP11.2□□□□□ -0.62
SUPT3H-205ENST00000475057 GAPVD1Q14C86 1478 aa11.2□□□□□ -0.62
SUPT3H-205ENST00000475057 SYNJ1O43426 1573 aa11.19□□□□□ -0.62
SUPT3H-205ENST00000475057 SOGA1O94964 1423 aa11.19□□□□□ -0.62
SUPT3H-205ENST00000475057 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
SUPT3H-205ENST00000475057 CCER1Q8TC90 406 aaPredicted RBP11.19□□□□□ -0.62
SUPT3H-205ENST00000475057 TNIKQ9UKE5 1360 aa11.19□□□□□ -0.62
SUPT3H-205ENST00000475057 ACIN1Q9UKV3 1341 aaKnown RBP11.18□□□□□ -0.62
SUPT3H-205ENST00000475057 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
SUPT3H-205ENST00000475057 NPM1P06748 294 aaKnown RBP eCLIP11.16□□□□□ -0.62
SUPT3H-205ENST00000475057 MAGI1Q96QZ7 1491 aaPredicted RBP11.13□□□□□ -0.63
SUPT3H-205ENST00000475057 ERCC6L2Q5T890 1561 aa11.13□□□□□ -0.63
SUPT3H-205ENST00000475057 CEP162Q5TB80 1403 aa11.13□□□□□ -0.63
SUPT3H-205ENST00000475057 TIMELESSQ9UNS1 1208 aa11.12□□□□□ -0.63
SUPT3H-205ENST00000475057 SYNJ2O15056 1496 aa11.12□□□□□ -0.63
SUPT3H-205ENST00000475057 GRIN2BQ13224 1484 aa11.11□□□□□ -0.63
SUPT3H-205ENST00000475057 FGD5Q6ZNL6 1462 aa11.11□□□□□ -0.63
SUPT3H-205ENST00000475057 DIEXFQ68CQ4 756 aaKnown RBP11.11□□□□□ -0.63
SUPT3H-205ENST00000475057 KIF13AQ9H1H9 1805 aa11.09□□□□□ -0.63
SUPT3H-205ENST00000475057 KDM4FA0A1W2PPD8 638 aa11.09□□□□□ -0.63
SUPT3H-205ENST00000475057 ABCB7O75027 752 aa11.07□□□□□ -0.64
SUPT3H-205ENST00000475057 ECM2O94769 699 aaPredicted RBP11.07□□□□□ -0.64
SUPT3H-205ENST00000475057 GOLGA3Q08378 1498 aa11.07□□□□□ -0.64
SUPT3H-205ENST00000475057 WDR97A6NE52 1622 aa11.07□□□□□ -0.64
SUPT3H-205ENST00000475057 TSHZ2Q9NRE2 1034 aa11.06□□□□□ -0.64
SUPT3H-205ENST00000475057 TULP1O00294 542 aaPredicted RBP11.05□□□□□ -0.64
SUPT3H-205ENST00000475057 NEUROD1Q13562 356 aa11.05□□□□□ -0.64
SUPT3H-205ENST00000475057 PBRM1Q86U86 1689 aa11.05□□□□□ -0.64
SUPT3H-205ENST00000475057 ZNF316A6NFI3 1004 aaPredicted RBP11.04□□□□□ -0.64
SUPT3H-205ENST00000475057 CUX1P39880 1505 aa11.04□□□□□ -0.64
SUPT3H-205ENST00000475057 KIF21BO75037 1637 aa11.04□□□□□ -0.64
SUPT3H-205ENST00000475057 CEP170Q5SW79 1584 aa11.02□□□□□ -0.65
SUPT3H-205ENST00000475057 FAM69CQ0P6D2 419 aa11.01□□□□□ -0.65
SUPT3H-205ENST00000475057 SPRYD3Q8NCJ5 442 aa11.01□□□□□ -0.65
SUPT3H-205ENST00000475057 SPOCK2Q92563 424 aa11.01□□□□□ -0.65
SUPT3H-205ENST00000475057 GTF3C3Q9Y5Q9 886 aa10.98□□□□□ -0.65
SUPT3H-205ENST00000475057 GRIN2AQ12879 1464 aa10.97□□□□□ -0.65
SUPT3H-205ENST00000475057 RGL2O15211 777 aa10.97□□□□□ -0.65
SUPT3H-205ENST00000475057 KLHL34Q8N239 644 aa10.97□□□□□ -0.65
SUPT3H-205ENST00000475057 CLSPNQ9HAW4 1339 aa10.97□□□□□ -0.65
SUPT3H-205ENST00000475057 UBTFP17480 764 aaKnown RBP10.96□□□□□ -0.65
SUPT3H-205ENST00000475057 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
SUPT3H-205ENST00000475057 NUP160Q12769 1436 aa10.95□□□□□ -0.66
SUPT3H-205ENST00000475057 NBR1Q14596 966 aa10.95□□□□□ -0.66
SUPT3H-205ENST00000475057 STAG3Q9UJ98 1225 aa10.95□□□□□ -0.66
SUPT3H-205ENST00000475057 ABCA5Q8WWZ7 1642 aa10.95□□□□□ -0.66
SUPT3H-205ENST00000475057 RUSC2Q8N2Y8 1516 aa10.95□□□□□ -0.66
SUPT3H-205ENST00000475057 SHROOM2Q13796 1616 aa10.94□□□□□ -0.66
SUPT3H-205ENST00000475057 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
SUPT3H-205ENST00000475057 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms