RNA–Protein interactions for RNA: ENST00000474983.5

GCNT2-209, Transcript of glucosaminyl (N-acetyl) transferase 2 (I blood group), humanhuman

TSL 1 (best)

Gene GCNT2, Length 1,933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT2-209ENST00000474983 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
GCNT2-209ENST00000474983 ATF5Q9Y2D1 282 aaPredicted RBP14.02□□□□□ -0.17
GCNT2-209ENST00000474983 PDS5BQ9NTI5 1447 aa13.99□□□□□ -0.17
GCNT2-209ENST00000474983 TRIM26Q12899 539 aaPredicted RBP13.98□□□□□ -0.17
GCNT2-209ENST00000474983 APLP2Q06481 763 aa13.98□□□□□ -0.17
GCNT2-209ENST00000474983 CADPSQ9ULU8 1353 aa13.97□□□□□ -0.17
GCNT2-209ENST00000474983 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.18
GCNT2-209ENST00000474983 PROM2Q8N271 834 aa13.93□□□□□ -0.18
GCNT2-209ENST00000474983 UBTFP17480 764 aaKnown RBP13.92□□□□□ -0.18
GCNT2-209ENST00000474983 MRC2Q9UBG0 1479 aa13.92□□□□□ -0.18
GCNT2-209ENST00000474983 WDR62O43379 1518 aa13.91□□□□□ -0.18
GCNT2-209ENST00000474983 SPDYE4A6NLX3 237 aa13.91□□□□□ -0.18
GCNT2-209ENST00000474983 TOP2AP11388 1531 aaKnown RBP13.86□□□□□ -0.19
GCNT2-209ENST00000474983 CEP164Q9UPV0 1460 aa13.84□□□□□ -0.19
GCNT2-209ENST00000474983 FANCD2Q9BXW9 1451 aa13.84□□□□□ -0.19
GCNT2-209ENST00000474983 HOXD11P31277 338 aaPredicted RBP13.83□□□□□ -0.2
GCNT2-209ENST00000474983 CFTRP13569 1480 aa13.82□□□□□ -0.2
GCNT2-209ENST00000474983 RGL2O15211 777 aa13.81□□□□□ -0.2
GCNT2-209ENST00000474983 HRCP23327 699 aa13.81□□□□□ -0.2
GCNT2-209ENST00000474983 URB2Q14146 1524 aaKnown RBP13.77□□□□□ -0.2
GCNT2-209ENST00000474983 TRIM41Q8WV44 630 aa13.77□□□□□ -0.21
GCNT2-209ENST00000474983 CCDC88BA6NC98 1476 aa13.74□□□□□ -0.21
GCNT2-209ENST00000474983 PELP1Q8IZL8 1130 aaKnown RBP13.74□□□□□ -0.21
GCNT2-209ENST00000474983 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
GCNT2-209ENST00000474983 SPOCK2Q92563 424 aa13.71□□□□□ -0.21
GCNT2-209ENST00000474983 CHGAP10645 457 aaKnown RBP13.7□□□□□ -0.22
GCNT2-209ENST00000474983 LOC105371045A0A1W2PR82 267 aa13.69□□□□□ -0.22
GCNT2-209ENST00000474983 BRPF1P55201 1214 aaPredicted RBP13.68□□□□□ -0.22
GCNT2-209ENST00000474983 ZNF608Q9ULD9 1512 aaPredicted RBP13.62□□□□□ -0.23
GCNT2-209ENST00000474983 TTBK1Q5TCY1 1321 aaPredicted RBP13.61□□□□□ -0.23
GCNT2-209ENST00000474983 TOPBP1Q92547 1522 aa13.59□□□□□ -0.23
GCNT2-209ENST00000474983 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
GCNT2-209ENST00000474983 IFT140Q96RY7 1462 aa13.55□□□□□ -0.24
GCNT2-209ENST00000474983 EIF4G3O43432 1585 aaKnown RBP13.54□□□□□ -0.24
GCNT2-209ENST00000474983 SAMD1Q6SPF0 538 aaPredicted RBP13.54□□□□□ -0.24
GCNT2-209ENST00000474983 MYT1Q01538 1121 aa13.53□□□□□ -0.24
GCNT2-209ENST00000474983 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
GCNT2-209ENST00000474983 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
GCNT2-209ENST00000474983 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
GCNT2-209ENST00000474983 DNMBPQ6XZF7 1577 aa13.52□□□□□ -0.24
GCNT2-209ENST00000474983 ABCC8Q09428 1581 aa13.51□□□□□ -0.25
GCNT2-209ENST00000474983 FAM9AQ8IZU1 332 aaPredicted RBP13.51□□□□□ -0.25
GCNT2-209ENST00000474983 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
GCNT2-209ENST00000474983 TARBP1Q13395 1621 aaKnown RBP13.5□□□□□ -0.25
GCNT2-209ENST00000474983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
GCNT2-209ENST00000474983 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
GCNT2-209ENST00000474983 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
GCNT2-209ENST00000474983 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
GCNT2-209ENST00000474983 CHD1O14646 1710 aa13.47□□□□□ -0.25
GCNT2-209ENST00000474983 DMRT2Q9Y5R5 561 aa13.47□□□□□ -0.25
GCNT2-209ENST00000474983 ARHGEF11O15085 1522 aa13.46□□□□□ -0.25
GCNT2-209ENST00000474983 AQRO60306 1485 aaKnown RBP eCLIP13.46□□□□□ -0.25
GCNT2-209ENST00000474983 NEUROD2Q15784 382 aa13.45□□□□□ -0.26
GCNT2-209ENST00000474983 LMOD2Q6P5Q4 547 aa13.45□□□□□ -0.26
GCNT2-209ENST00000474983 CCDC9Q9Y3X0 531 aaKnown RBP13.45□□□□□ -0.26
GCNT2-209ENST00000474983 POLA1P09884 1462 aaPredicted RBP13.45□□□□□ -0.26
GCNT2-209ENST00000474983 HS6ST3Q8IZP7 471 aa13.45□□□□□ -0.26
GCNT2-209ENST00000474983 ZMYND15Q9H091 742 aa13.43□□□□□ -0.26
GCNT2-209ENST00000474983 RAD54L2Q9Y4B4 1467 aa13.42□□□□□ -0.26
GCNT2-209ENST00000474983 WRNQ14191 1432 aaPredicted RBP eCLIP13.42□□□□□ -0.26
GCNT2-209ENST00000474983 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.41□□□□□ -0.26
GCNT2-209ENST00000474983 RSPH6AQ9H0K4 717 aa13.41□□□□□ -0.26
GCNT2-209ENST00000474983 EEA1Q15075 1411 aa13.41□□□□□ -0.26
GCNT2-209ENST00000474983 ARID3AQ99856 593 aa13.37□□□□□ -0.27
GCNT2-209ENST00000474983 PCGF6Q9BYE7 350 aa13.37□□□□□ -0.27
GCNT2-209ENST00000474983 CUX1P39880 1505 aa13.36□□□□□ -0.27
GCNT2-209ENST00000474983 TDRD9Q8NDG6 1382 aaKnown RBP13.36□□□□□ -0.27
GCNT2-209ENST00000474983 SOGA1O94964 1423 aa13.36□□□□□ -0.27
GCNT2-209ENST00000474983 FGD5Q6ZNL6 1462 aa13.36□□□□□ -0.27
GCNT2-209ENST00000474983 ARAP1Q96P48 1450 aa13.35□□□□□ -0.27
GCNT2-209ENST00000474983 ZBTB7CA1YPR0 619 aa13.33□□□□□ -0.28
GCNT2-209ENST00000474983 MSH5O43196 834 aa13.33□□□□□ -0.28
GCNT2-209ENST00000474983 SYNJ1O43426 1573 aa13.33□□□□□ -0.28
GCNT2-209ENST00000474983 SNAPC4Q5SXM2 1469 aa13.32□□□□□ -0.28
GCNT2-209ENST00000474983 P3H3Q8IVL6 736 aa13.32□□□□□ -0.28
GCNT2-209ENST00000474983 CYB5RLQ6IPT4 315 aa13.31□□□□□ -0.28
GCNT2-209ENST00000474983 WDR97A6NE52 1622 aa13.31□□□□□ -0.28
GCNT2-209ENST00000474983 NKX1-1Q15270 411 aaPredicted RBP13.31□□□□□ -0.28
GCNT2-209ENST00000474983 GTPBP6O43824 516 aaPredicted RBP13.29□□□□□ -0.28
GCNT2-209ENST00000474983 CLASP1Q7Z460 1538 aa13.28□□□□□ -0.28
GCNT2-209ENST00000474983 RUSC2Q8N2Y8 1516 aa13.28□□□□□ -0.28
GCNT2-209ENST00000474983 TNIKQ9UKE5 1360 aa13.27□□□□□ -0.29
GCNT2-209ENST00000474983 TOP2BQ02880 1626 aa13.26□□□□□ -0.29
GCNT2-209ENST00000474983 C1orf115Q9H7X2 142 aa13.25□□□□□ -0.29
GCNT2-209ENST00000474983 PBRM1Q86U86 1689 aa13.25□□□□□ -0.29
GCNT2-209ENST00000474983 CIZ1Q9ULV3 898 aaPredicted RBP13.24□□□□□ -0.29
GCNT2-209ENST00000474983 MAGI1Q96QZ7 1491 aaPredicted RBP13.24□□□□□ -0.29
GCNT2-209ENST00000474983 PDIA4P13667 645 aaKnown RBP13.23□□□□□ -0.29
GCNT2-209ENST00000474983 GRIN2BQ13224 1484 aa13.23□□□□□ -0.29
GCNT2-209ENST00000474983 BIVM-ERCC5R4GMW8 1640 aa13.23□□□□□ -0.29
GCNT2-209ENST00000474983 GOLGA3Q08378 1498 aa13.21□□□□□ -0.29
GCNT2-209ENST00000474983 SYNJ2O15056 1496 aa13.21□□□□□ -0.3
GCNT2-209ENST00000474983 SLC24A3Q9HC58 644 aa13.21□□□□□ -0.3
GCNT2-209ENST00000474983 ABCA5Q8WWZ7 1642 aa13.21□□□□□ -0.3
GCNT2-209ENST00000474983 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
GCNT2-209ENST00000474983 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
GCNT2-209ENST00000474983 GAPVD1Q14C86 1478 aa13.19□□□□□ -0.3
GCNT2-209ENST00000474983 CHMP7Q8WUX9 453 aaPredicted RBP13.19□□□□□ -0.3
GCNT2-209ENST00000474983 NECTIN2Q92692 538 aa13.19□□□□□ -0.3
GCNT2-209ENST00000474983 KIF21BO75037 1637 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms