RNA–Protein interactions for RNA: ENST00000474846.5

GPD1L-206, Transcript of glycerol-3-phosphate dehydrogenase 1 like, humanhuman

TSL 2

Gene GPD1L, Length 3,776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD1L-206ENST00000474846 WDR97A6NE52 1622 aa12.49□□□□□ -0.41
GPD1L-206ENST00000474846 GRIN2BQ13224 1484 aa12.48□□□□□ -0.41
GPD1L-206ENST00000474846 IGF1RP08069 1367 aa12.48□□□□□ -0.41
GPD1L-206ENST00000474846 NPM1P06748 294 aaKnown RBP eCLIP12.48□□□□□ -0.41
GPD1L-206ENST00000474846 DIEXFQ68CQ4 756 aaKnown RBP12.46□□□□□ -0.41
GPD1L-206ENST00000474846 SNAPC4Q5SXM2 1469 aa12.46□□□□□ -0.41
GPD1L-206ENST00000474846 TOP2BQ02880 1626 aa12.46□□□□□ -0.41
GPD1L-206ENST00000474846 JPH4Q96JJ6 628 aa12.46□□□□□ -0.41
GPD1L-206ENST00000474846 CEP162Q5TB80 1403 aa12.46□□□□□ -0.42
GPD1L-206ENST00000474846 EEA1Q15075 1411 aa12.45□□□□□ -0.42
GPD1L-206ENST00000474846 TNIKQ9UKE5 1360 aa12.44□□□□□ -0.42
GPD1L-206ENST00000474846 TRHP20396 242 aaPredicted RBP12.42□□□□□ -0.42
GPD1L-206ENST00000474846 KIF21BO75037 1637 aa12.42□□□□□ -0.42
GPD1L-206ENST00000474846 ABCA10Q8WWZ4 1543 aa12.41□□□□□ -0.42
GPD1L-206ENST00000474846 FHAD1B1AJZ9 1412 aa12.39□□□□□ -0.43
GPD1L-206ENST00000474846 ERICH6Q7L0X2 663 aa12.38□□□□□ -0.43
GPD1L-206ENST00000474846 BIVM-ERCC5R4GMW8 1640 aa12.38□□□□□ -0.43
GPD1L-206ENST00000474846 GOLGA3Q08378 1498 aa12.36□□□□□ -0.43
GPD1L-206ENST00000474846 RAPGEF2Q9Y4G8 1499 aa12.36□□□□□ -0.43
GPD1L-206ENST00000474846 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
GPD1L-206ENST00000474846 MYT1LQ9UL68 1186 aa12.33□□□□□ -0.44
GPD1L-206ENST00000474846 SYNJ2O15056 1496 aa12.32□□□□□ -0.44
GPD1L-206ENST00000474846 EIF4G3O43432 1585 aaKnown RBP12.32□□□□□ -0.44
GPD1L-206ENST00000474846 MAGI1Q96QZ7 1491 aaPredicted RBP12.31□□□□□ -0.44
GPD1L-206ENST00000474846 DNAJC5Q9H3Z4 198 aa12.29□□□□□ -0.44
GPD1L-206ENST00000474846 CARMIL2Q6F5E8 1435 aa12.29□□□□□ -0.44
GPD1L-206ENST00000474846 TARBP1Q13395 1621 aaKnown RBP12.27□□□□□ -0.45
GPD1L-206ENST00000474846 BCL11AQ9H165 835 aa12.27□□□□□ -0.45
GPD1L-206ENST00000474846 PRG4Q92954 1404 aaPredicted RBP12.27□□□□□ -0.45
GPD1L-206ENST00000474846 GRIN2AQ12879 1464 aa12.26□□□□□ -0.45
GPD1L-206ENST00000474846 PTPRGP23470 1445 aa12.25□□□□□ -0.45
GPD1L-206ENST00000474846 CLIP1P30622 1438 aa12.25□□□□□ -0.45
GPD1L-206ENST00000474846 CDK11AQ9UQ88 783 aaPredicted RBP12.23□□□□□ -0.45
GPD1L-206ENST00000474846 ERICH3Q5RHP9 1530 aa12.23□□□□□ -0.45
GPD1L-206ENST00000474846 PLEKHD1A6NEE1 506 aa12.21□□□□□ -0.46
GPD1L-206ENST00000474846 ZNF777Q9ULD5 760 aaPredicted RBP12.21□□□□□ -0.46
GPD1L-206ENST00000474846 ITGAEP38570 1179 aa12.19□□□□□ -0.46
GPD1L-206ENST00000474846 PRXQ9BXM0 1461 aa12.19□□□□□ -0.46
GPD1L-206ENST00000474846 FHOD3Q2V2M9 1422 aa12.19□□□□□ -0.46
GPD1L-206ENST00000474846 VPS8Q8N3P4 1428 aa12.18□□□□□ -0.46
GPD1L-206ENST00000474846 KIAA0586Q9BVV6 1533 aa12.17□□□□□ -0.46
GPD1L-206ENST00000474846 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
GPD1L-206ENST00000474846 ABCA5Q8WWZ7 1642 aa12.14□□□□□ -0.47
GPD1L-206ENST00000474846 FAM69CQ0P6D2 419 aa12.13□□□□□ -0.47
GPD1L-206ENST00000474846 MIER1Q8N108 512 aa12.13□□□□□ -0.47
GPD1L-206ENST00000474846 ARAP1Q96P48 1450 aa12.12□□□□□ -0.47
GPD1L-206ENST00000474846 ADAMTS12P58397 1594 aa12.12□□□□□ -0.47
GPD1L-206ENST00000474846 PBRM1Q86U86 1689 aa12.11□□□□□ -0.47
GPD1L-206ENST00000474846 FAM50AQ14320 339 aaKnown RBP12.1□□□□□ -0.47
GPD1L-206ENST00000474846 CUL7Q14999 1698 aa12.1□□□□□ -0.47
GPD1L-206ENST00000474846 MTUS2Q5JR59 1369 aa12.1□□□□□ -0.47
GPD1L-206ENST00000474846 NUP160Q12769 1436 aa12.08□□□□□ -0.48
GPD1L-206ENST00000474846 CHD1O14646 1710 aa12.07□□□□□ -0.48
GPD1L-206ENST00000474846 IQGAP2Q13576 1575 aa12.06□□□□□ -0.48
GPD1L-206ENST00000474846 PLPPR3Q6T4P5 718 aa12.04□□□□□ -0.48
GPD1L-206ENST00000474846 CEP170Q5SW79 1584 aa12.04□□□□□ -0.48
GPD1L-206ENST00000474846 FMN1Q68DA7 1419 aa12.04□□□□□ -0.48
GPD1L-206ENST00000474846 ARHGEF11O15085 1522 aa12.02□□□□□ -0.48
GPD1L-206ENST00000474846 PLB1Q6P1J6 1458 aa12□□□□□ -0.49
GPD1L-206ENST00000474846 ARHGAP35Q9NRY4 1499 aa12□□□□□ -0.49
GPD1L-206ENST00000474846 UACAQ9BZF9 1416 aa12□□□□□ -0.49
GPD1L-206ENST00000474846 CFDP1Q9UEE9 299 aaPredicted RBP12□□□□□ -0.49
GPD1L-206ENST00000474846 KANK4Q5T7N3 995 aaPredicted RBP11.97□□□□□ -0.49
GPD1L-206ENST00000474846 RRBP1Q9P2E9 1410 aaKnown RBP11.96□□□□□ -0.5
GPD1L-206ENST00000474846 BCANQ96GW7 911 aa11.96□□□□□ -0.5
GPD1L-206ENST00000474846 ERCC6L2Q5T890 1561 aa11.95□□□□□ -0.5
GPD1L-206ENST00000474846 ARID4BQ4LE39 1312 aaPredicted RBP11.95□□□□□ -0.5
GPD1L-206ENST00000474846 CHIC2Q9UKJ5 165 aa11.95□□□□□ -0.5
GPD1L-206ENST00000474846 SHROOM2Q13796 1616 aa11.92□□□□□ -0.5
GPD1L-206ENST00000474846 EFCAB2Q5VUJ9 269 aa11.92□□□□□ -0.5
GPD1L-206ENST00000474846 CCNB3Q8WWL7 1395 aa11.92□□□□□ -0.5
GPD1L-206ENST00000474846 TSPY4P0CV99 314 aa11.91□□□□□ -0.5
GPD1L-206ENST00000474846 TSPY10P0CW01 314 aa11.91□□□□□ -0.5
GPD1L-206ENST00000474846 DISP1Q96F81 1524 aa11.91□□□□□ -0.5
GPD1L-206ENST00000474846 MLECQ14165 292 aa11.9□□□□□ -0.5
GPD1L-206ENST00000474846 ESF1Q9H501 851 aaKnown RBP11.89□□□□□ -0.51
GPD1L-206ENST00000474846 DHX57Q6P158 1386 aaKnown RBP11.89□□□□□ -0.51
GPD1L-206ENST00000474846 MAP3K1Q13233 1512 aa11.89□□□□□ -0.51
GPD1L-206ENST00000474846 TIAM1Q13009 1591 aa11.89□□□□□ -0.51
GPD1L-206ENST00000474846 CFAP43Q8NDM7 1665 aa11.89□□□□□ -0.51
GPD1L-206ENST00000474846 UGGT2Q9NYU1 1516 aa11.89□□□□□ -0.51
GPD1L-206ENST00000474846 SUPT16HQ9Y5B9 1047 aaKnown RBP11.88□□□□□ -0.51
GPD1L-206ENST00000474846 HNRNPMP52272 730 aaKnown RBP eCLIP11.87□□□□□ -0.51
GPD1L-206ENST00000474846 RIMBP3CA6NJZ7 1639 aa11.87□□□□□ -0.51
GPD1L-206ENST00000474846 RIMBP3BA6NNM3 1639 aa11.87□□□□□ -0.51
GPD1L-206ENST00000474846 RIMBP3Q9UFD9 1639 aa11.87□□□□□ -0.51
GPD1L-206ENST00000474846 CLASP1Q7Z460 1538 aa11.87□□□□□ -0.51
GPD1L-206ENST00000474846 EFCAB5A4FU69 1503 aa11.86□□□□□ -0.51
GPD1L-206ENST00000474846 ANP32EQ9BTT0 268 aa11.86□□□□□ -0.51
GPD1L-206ENST00000474846 ASXL2Q76L83 1435 aa11.85□□□□□ -0.51
GPD1L-206ENST00000474846 KIAA0556O60303 1618 aa11.85□□□□□ -0.51
GPD1L-206ENST00000474846 CDK13Q14004 1512 aaKnown RBP11.85□□□□□ -0.51
GPD1L-206ENST00000474846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.85□□□□□ -0.51
GPD1L-206ENST00000474846 TRIM52Q96A61 297 aa11.84□□□□□ -0.51
GPD1L-206ENST00000474846 RAPGEF3O95398 923 aa11.83□□□□□ -0.51
GPD1L-206ENST00000474846 CTTNBP2Q8WZ74 1663 aa11.83□□□□□ -0.52
GPD1L-206ENST00000474846 CASKIN1Q8WXD9 1431 aa11.83□□□□□ -0.52
GPD1L-206ENST00000474846 PCF11O94913 1555 aaKnown RBP11.83□□□□□ -0.52
GPD1L-206ENST00000474846 CLSPNQ9HAW4 1339 aa11.82□□□□□ -0.52
GPD1L-206ENST00000474846 ATP10BO94823 1461 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms