RNA–Protein interactions for RNA: ENST00000474846.5

GPD1L-206, Transcript of glycerol-3-phosphate dehydrogenase 1 like, humanhuman

TSL 2

Gene GPD1L, Length 3,776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD1L-206ENST00000474846 NISCHQ9Y2I1 1504 aa17.42■□□□□ 0.38
GPD1L-206ENST00000474846 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
GPD1L-206ENST00000474846 CCDC180Q9P1Z9 1646 aa15.34■□□□□ 0.05
GPD1L-206ENST00000474846 ABCC9O60706 1549 aa15.29■□□□□ 0.04
GPD1L-206ENST00000474846 SHROOM4Q9ULL8 1493 aa14.76□□□□□ -0.05
GPD1L-206ENST00000474846 PABPN1Q86U42 306 aaKnown RBP eCLIP14.62□□□□□ -0.07
GPD1L-206ENST00000474846 ZCCHC6Q5VYS8 1495 aaKnown RBP14.45□□□□□ -0.1
GPD1L-206ENST00000474846 RB1CC1Q8TDY2 1594 aa14.4□□□□□ -0.1
GPD1L-206ENST00000474846 MYO15BQ96JP2 1530 aa14.38□□□□□ -0.11
GPD1L-206ENST00000474846 NACADO15069 1562 aa14.33□□□□□ -0.12
GPD1L-206ENST00000474846 DCAF1Q9Y4B6 1507 aa14.32□□□□□ -0.12
GPD1L-206ENST00000474846 SCRIBQ14160 1630 aa14.25□□□□□ -0.13
GPD1L-206ENST00000474846 SUPT5HO00267 1087 aaKnown RBP14.2□□□□□ -0.14
GPD1L-206ENST00000474846 UNC13AQ9UPW8 1703 aa14.19□□□□□ -0.14
GPD1L-206ENST00000474846 BICRAQ9NZM4 1560 aa13.82□□□□□ -0.2
GPD1L-206ENST00000474846 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
GPD1L-206ENST00000474846 CECR2Q9BXF3 1484 aa13.73□□□□□ -0.21
GPD1L-206ENST00000474846 HRCP23327 699 aa13.57□□□□□ -0.24
GPD1L-206ENST00000474846 PCGF6Q9BYE7 350 aa13.55□□□□□ -0.24
GPD1L-206ENST00000474846 EIF4G1Q04637 1599 aaKnown RBP13.54□□□□□ -0.24
GPD1L-206ENST00000474846 CHIC1Q5VXU3 224 aa13.54□□□□□ -0.24
GPD1L-206ENST00000474846 BAZ1AQ9NRL2 1556 aaPredicted RBP13.52□□□□□ -0.25
GPD1L-206ENST00000474846 PPARGC1BQ86YN6 1023 aaKnown RBP13.52□□□□□ -0.25
GPD1L-206ENST00000474846 MROH2BQ7Z745 1585 aa13.51□□□□□ -0.25
GPD1L-206ENST00000474846 RSF1Q96T23 1441 aaPredicted RBP13.51□□□□□ -0.25
GPD1L-206ENST00000474846 BAZ1BQ9UIG0 1483 aaKnown RBP13.49□□□□□ -0.25
GPD1L-206ENST00000474846 CC2D2AQ9P2K1 1620 aa13.46□□□□□ -0.26
GPD1L-206ENST00000474846 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
GPD1L-206ENST00000474846 SMARCA4P51532 1647 aa13.39□□□□□ -0.27
GPD1L-206ENST00000474846 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
GPD1L-206ENST00000474846 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
GPD1L-206ENST00000474846 PEG3Q9GZU2 1588 aa13.34□□□□□ -0.27
GPD1L-206ENST00000474846 WIZO95785 1651 aa13.32□□□□□ -0.28
GPD1L-206ENST00000474846 EHMT2Q96KQ7 1210 aa13.31□□□□□ -0.28
GPD1L-206ENST00000474846 NCAPD3P42695 1498 aa13.3□□□□□ -0.28
GPD1L-206ENST00000474846 ERCC6Q03468 1493 aa13.28□□□□□ -0.28
GPD1L-206ENST00000474846 FAM9AQ8IZU1 332 aaPredicted RBP13.25□□□□□ -0.29
GPD1L-206ENST00000474846 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
GPD1L-206ENST00000474846 CCDC88BA6NC98 1476 aa13.17□□□□□ -0.3
GPD1L-206ENST00000474846 MYT1Q01538 1121 aa13.16□□□□□ -0.3
GPD1L-206ENST00000474846 CADPSQ9ULU8 1353 aa13.16□□□□□ -0.3
GPD1L-206ENST00000474846 NESP48681 1621 aa13.14□□□□□ -0.31
GPD1L-206ENST00000474846 TOP2AP11388 1531 aaKnown RBP13.13□□□□□ -0.31
GPD1L-206ENST00000474846 PDS5BQ9NTI5 1447 aa13.12□□□□□ -0.31
GPD1L-206ENST00000474846 FBLN2P98095 1184 aa13.11□□□□□ -0.31
GPD1L-206ENST00000474846 HMGXB3Q12766 1538 aa13.09□□□□□ -0.31
GPD1L-206ENST00000474846 LOC105371045A0A1W2PR82 267 aa13.08□□□□□ -0.31
GPD1L-206ENST00000474846 RANGAP1P46060 587 aaPredicted RBP13.05□□□□□ -0.32
GPD1L-206ENST00000474846 FANCD2Q9BXW9 1451 aa12.99□□□□□ -0.33
GPD1L-206ENST00000474846 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
GPD1L-206ENST00000474846 CEP164Q9UPV0 1460 aa12.96□□□□□ -0.33
GPD1L-206ENST00000474846 TTBK1Q5TCY1 1321 aaPredicted RBP12.96□□□□□ -0.34
GPD1L-206ENST00000474846 CFTRP13569 1480 aa12.92□□□□□ -0.34
GPD1L-206ENST00000474846 TRIM26Q12899 539 aaPredicted RBP12.91□□□□□ -0.34
GPD1L-206ENST00000474846 UBTFP17480 764 aaKnown RBP12.9□□□□□ -0.35
GPD1L-206ENST00000474846 WRNQ14191 1432 aaPredicted RBP eCLIP12.89□□□□□ -0.35
GPD1L-206ENST00000474846 SCAF1Q9H7N4 1312 aaKnown RBP12.89□□□□□ -0.35
GPD1L-206ENST00000474846 CHMP7Q8WUX9 453 aaPredicted RBP12.85□□□□□ -0.35
GPD1L-206ENST00000474846 TDRD9Q8NDG6 1382 aaKnown RBP12.85□□□□□ -0.35
GPD1L-206ENST00000474846 LAMC3Q9Y6N6 1575 aa12.85□□□□□ -0.35
GPD1L-206ENST00000474846 ABCC8Q09428 1581 aa12.83□□□□□ -0.36
GPD1L-206ENST00000474846 SOGA1O94964 1423 aa12.82□□□□□ -0.36
GPD1L-206ENST00000474846 MRC2Q9UBG0 1479 aa12.8□□□□□ -0.36
GPD1L-206ENST00000474846 ATP1B4Q9UN42 357 aaPredicted RBP12.79□□□□□ -0.36
GPD1L-206ENST00000474846 ZEB1P37275 1124 aaPredicted RBP12.78□□□□□ -0.36
GPD1L-206ENST00000474846 RAD54L2Q9Y4B4 1467 aa12.74□□□□□ -0.37
GPD1L-206ENST00000474846 CSRNP3Q8WYN3 585 aa12.73□□□□□ -0.37
GPD1L-206ENST00000474846 CUX2O14529 1486 aa12.72□□□□□ -0.37
GPD1L-206ENST00000474846 AQRO60306 1485 aaKnown RBP eCLIP12.7□□□□□ -0.38
GPD1L-206ENST00000474846 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
GPD1L-206ENST00000474846 PRKCSHP14314 528 aaPredicted RBP12.7□□□□□ -0.38
GPD1L-206ENST00000474846 TOPBP1Q92547 1522 aa12.7□□□□□ -0.38
GPD1L-206ENST00000474846 URB2Q14146 1524 aaKnown RBP12.69□□□□□ -0.38
GPD1L-206ENST00000474846 P3H3Q8IVL6 736 aa12.67□□□□□ -0.38
GPD1L-206ENST00000474846 KIF27Q86VH2 1401 aa12.65□□□□□ -0.38
GPD1L-206ENST00000474846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
GPD1L-206ENST00000474846 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
GPD1L-206ENST00000474846 KIF21AQ7Z4S6 1674 aa12.65□□□□□ -0.38
GPD1L-206ENST00000474846 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
GPD1L-206ENST00000474846 POLA1P09884 1462 aaPredicted RBP12.63□□□□□ -0.39
GPD1L-206ENST00000474846 CUX1P39880 1505 aa12.62□□□□□ -0.39
GPD1L-206ENST00000474846 ARID3CA6NKF2 412 aa12.6□□□□□ -0.39
GPD1L-206ENST00000474846 GTF3C3Q9Y5Q9 886 aa12.6□□□□□ -0.39
GPD1L-206ENST00000474846 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
GPD1L-206ENST00000474846 NEUROD1Q13562 356 aa12.59□□□□□ -0.39
GPD1L-206ENST00000474846 DNMBPQ6XZF7 1577 aa12.59□□□□□ -0.39
GPD1L-206ENST00000474846 ZNF608Q9ULD9 1512 aaPredicted RBP12.59□□□□□ -0.39
GPD1L-206ENST00000474846 ACIN1Q9UKV3 1341 aaKnown RBP12.58□□□□□ -0.4
GPD1L-206ENST00000474846 THOC2Q8NI27 1593 aaKnown RBP12.57□□□□□ -0.4
GPD1L-206ENST00000474846 CCER1Q8TC90 406 aaPredicted RBP12.57□□□□□ -0.4
GPD1L-206ENST00000474846 GAPVD1Q14C86 1478 aa12.57□□□□□ -0.4
GPD1L-206ENST00000474846 CARMIL1Q5VZK9 1371 aa12.56□□□□□ -0.4
GPD1L-206ENST00000474846 CENPBP07199 599 aaPredicted RBP12.55□□□□□ -0.4
GPD1L-206ENST00000474846 APLP2Q06481 763 aa12.55□□□□□ -0.4
GPD1L-206ENST00000474846 SYNJ1O43426 1573 aa12.55□□□□□ -0.4
GPD1L-206ENST00000474846 RUSC2Q8N2Y8 1516 aa12.53□□□□□ -0.4
GPD1L-206ENST00000474846 YTHDC1Q96MU7 727 aaKnown RBP12.53□□□□□ -0.4
GPD1L-206ENST00000474846 SLC24A1O60721 1099 aa12.53□□□□□ -0.4
GPD1L-206ENST00000474846 CYB5RLQ6IPT4 315 aa12.52□□□□□ -0.41
GPD1L-206ENST00000474846 WDR62O43379 1518 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms