RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 PCF11O94913 1555 aaKnown RBP20.36■□□□□ 0.85
RPGR-206ENST00000474584 SETD5Q9C0A6 1442 aa20.35■□□□□ 0.85
RPGR-206ENST00000474584 FANCD2Q9BXW9 1451 aa20.32■□□□□ 0.84
RPGR-206ENST00000474584 PHLDB1Q86UU1 1377 aa20.32■□□□□ 0.84
RPGR-206ENST00000474584 DNMBPQ6XZF7 1577 aa20.31■□□□□ 0.84
RPGR-206ENST00000474584 CC2D2AQ9P2K1 1620 aa20.31■□□□□ 0.84
RPGR-206ENST00000474584 EFCAB5A4FU69 1503 aa20.3■□□□□ 0.84
RPGR-206ENST00000474584 FYCO1Q9BQS8 1478 aa20.28■□□□□ 0.84
RPGR-206ENST00000474584 CUL7Q14999 1698 aa20.28■□□□□ 0.84
RPGR-206ENST00000474584 CTTNBP2Q8WZ74 1663 aa20.27■□□□□ 0.84
RPGR-206ENST00000474584 MYT1Q01538 1121 aa20.27■□□□□ 0.83
RPGR-206ENST00000474584 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.83
RPGR-206ENST00000474584 FAM50AQ14320 339 aaKnown RBP20.25■□□□□ 0.83
RPGR-206ENST00000474584 AQRO60306 1485 aaKnown RBP eCLIP20.23■□□□□ 0.839e-8■■■□□ 18.2
RPGR-206ENST00000474584 FHOD3Q2V2M9 1422 aa20.22■□□□□ 0.83
RPGR-206ENST00000474584 TOPBP1Q92547 1522 aa20.21■□□□□ 0.83
RPGR-206ENST00000474584 POLA1P09884 1462 aaPredicted RBP20.21■□□□□ 0.83
RPGR-206ENST00000474584 CASKIN1Q8WXD9 1431 aa20.21■□□□□ 0.83
RPGR-206ENST00000474584 RAD54L2Q9Y4B4 1467 aa20.21■□□□□ 0.83
RPGR-206ENST00000474584 P3H3Q8IVL6 736 aa20.2■□□□□ 0.82
RPGR-206ENST00000474584 WDR97A6NE52 1622 aa20.19■□□□□ 0.82
RPGR-206ENST00000474584 ATP1B4Q9UN42 357 aaPredicted RBP20.19■□□□□ 0.82
RPGR-206ENST00000474584 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.18■□□□□ 0.82
RPGR-206ENST00000474584 TIMELESSQ9UNS1 1208 aa20.16■□□□□ 0.82
RPGR-206ENST00000474584 SUPT16HQ9Y5B9 1047 aaKnown RBP20.15■□□□□ 0.82
RPGR-206ENST00000474584 FMN1Q68DA7 1419 aa20.14■□□□□ 0.82
RPGR-206ENST00000474584 SIN3AQ96ST3 1273 aa20.11■□□□□ 0.81
RPGR-206ENST00000474584 FGD6Q6ZV73 1430 aa20.09■□□□□ 0.81
RPGR-206ENST00000474584 SNAPC4Q5SXM2 1469 aa20.09■□□□□ 0.81
RPGR-206ENST00000474584 NESP48681 1621 aa20.08■□□□□ 0.8
RPGR-206ENST00000474584 SAMD9Q5K651 1589 aa20.06■□□□□ 0.8
RPGR-206ENST00000474584 LAMC3Q9Y6N6 1575 aa20.05■□□□□ 0.8
RPGR-206ENST00000474584 ABCA5Q8WWZ7 1642 aa20.04■□□□□ 0.8
RPGR-206ENST00000474584 MTUS2Q5JR59 1369 aa20.03■□□□□ 0.8
RPGR-206ENST00000474584 DDX10Q13206 875 aaKnown RBP20.03■□□□□ 0.8
RPGR-206ENST00000474584 CCDC18Q5T9S5 1454 aa20.03■□□□□ 0.8
RPGR-206ENST00000474584 LRRIQ1Q96JM4 1722 aa20.02■□□□□ 0.8
RPGR-206ENST00000474584 THOC2Q8NI27 1593 aaKnown RBP20.02■□□□□ 0.8
RPGR-206ENST00000474584 KCNH8Q96L42 1107 aa20.01■□□□□ 0.79
RPGR-206ENST00000474584 URB2Q14146 1524 aaKnown RBP20■□□□□ 0.79
RPGR-206ENST00000474584 HFM1A2PYH4 1435 aa20■□□□□ 0.79
RPGR-206ENST00000474584 PPP1R15AO75807 674 aaPredicted RBP20■□□□□ 0.79
RPGR-206ENST00000474584 SUPT6HQ7KZ85 1726 aaKnown RBP20■□□□□ 0.79
RPGR-206ENST00000474584 KIF21AQ7Z4S6 1674 aa19.99■□□□□ 0.79
RPGR-206ENST00000474584 PTPN23Q9H3S7 1636 aa19.99■□□□□ 0.79
RPGR-206ENST00000474584 UACAQ9BZF9 1416 aa19.97■□□□□ 0.79
RPGR-206ENST00000474584 TONSLQ96HA7 1378 aa19.97■□□□□ 0.79
RPGR-206ENST00000474584 EHBP1L1Q8N3D4 1523 aa19.96■□□□□ 0.79
RPGR-206ENST00000474584 GRIN2BQ13224 1484 aa19.96■□□□□ 0.79
RPGR-206ENST00000474584 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
RPGR-206ENST00000474584 MYOM3Q5VTT5 1437 aa19.95■□□□□ 0.78
RPGR-206ENST00000474584 NCOA2Q15596 1464 aa19.95■□□□□ 0.78
RPGR-206ENST00000474584 TDRD9Q8NDG6 1382 aaKnown RBP19.92■□□□□ 0.78
RPGR-206ENST00000474584 PTPRKQ15262 1439 aa19.91■□□□□ 0.78
RPGR-206ENST00000474584 CCER2I3L3R5 266 aa19.91■□□□□ 0.78
RPGR-206ENST00000474584 ANP32CO43423 234 aa19.9■□□□□ 0.78
RPGR-206ENST00000474584 NAIPQ13075 1403 aa19.89■□□□□ 0.77
RPGR-206ENST00000474584 UGGT2Q9NYU1 1516 aa19.88■□□□□ 0.77
RPGR-206ENST00000474584 HIRIP3Q9BW71 556 aaPredicted RBP19.87■□□□□ 0.77
RPGR-206ENST00000474584 PDS5BQ9NTI5 1447 aa19.87■□□□□ 0.77
RPGR-206ENST00000474584 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
RPGR-206ENST00000474584 ARHGEF11O15085 1522 aa19.85■□□□□ 0.77
RPGR-206ENST00000474584 GCC2Q8IWJ2 1684 aa19.85■□□□□ 0.77
RPGR-206ENST00000474584 HECW1Q76N89 1606 aa19.84■□□□□ 0.77
RPGR-206ENST00000474584 TSHZ2Q9NRE2 1034 aa19.82■□□□□ 0.76
RPGR-206ENST00000474584 TARBP1Q13395 1621 aaKnown RBP19.81■□□□□ 0.76
RPGR-206ENST00000474584 PBRM1Q86U86 1689 aa19.81■□□□□ 0.76
RPGR-206ENST00000474584 MAGI3Q5TCQ9 1506 aa19.8■□□□□ 0.76
RPGR-206ENST00000474584 TCOF1Q13428 1488 aaKnown RBP19.79■□□□□ 0.76
RPGR-206ENST00000474584 FKBP8Q14318 412 aa19.79■□□□□ 0.76
RPGR-206ENST00000474584 NEFLP07196 543 aa19.78■□□□□ 0.76
RPGR-206ENST00000474584 KDM5BQ9UGL1 1544 aa19.77■□□□□ 0.76
RPGR-206ENST00000474584 IQGAP2Q13576 1575 aa19.77■□□□□ 0.75
RPGR-206ENST00000474584 AKNAQ7Z591 1439 aa19.76■□□□□ 0.75
RPGR-206ENST00000474584 BCANQ96GW7 911 aa19.74■□□□□ 0.75
RPGR-206ENST00000474584 TRIM52Q96A61 297 aa19.74■□□□□ 0.75
RPGR-206ENST00000474584 EPRSP07814 1512 aaKnown RBP19.72■□□□□ 0.75
RPGR-206ENST00000474584 ADAMTS12P58397 1594 aa19.71■□□□□ 0.75
RPGR-206ENST00000474584 MIA2Q96PC5 1412 aa19.7■□□□□ 0.74
RPGR-206ENST00000474584 RRP7BPQ9NSQ0 103 aa19.7■□□□□ 0.74
RPGR-206ENST00000474584 WDR62O43379 1518 aa19.68■□□□□ 0.74
RPGR-206ENST00000474584 CHIC2Q9UKJ5 165 aa19.67■□□□□ 0.74
RPGR-206ENST00000474584 CDK13Q14004 1512 aaKnown RBP19.66■□□□□ 0.74
RPGR-206ENST00000474584 KDM6BO15054 1643 aa19.66■□□□□ 0.74
RPGR-206ENST00000474584 DENND4BO75064 1496 aaPredicted RBP19.66■□□□□ 0.74
RPGR-206ENST00000474584 HSPA5P11021 654 aaKnown RBP19.6■□□□□ 0.73
RPGR-206ENST00000474584 EIF4G2P78344 907 aaKnown RBP eCLIP19.59■□□□□ 0.73
RPGR-206ENST00000474584 WASHC2AQ641Q2 1341 aa19.59■□□□□ 0.73
RPGR-206ENST00000474584 MPHOSPH9Q99550 1183 aa19.59■□□□□ 0.73
RPGR-206ENST00000474584 DNMT1P26358 1616 aaKnown RBP19.57■□□□□ 0.72
RPGR-206ENST00000474584 MRC2Q9UBG0 1479 aa19.56■□□□□ 0.72
RPGR-206ENST00000474584 ROCK1Q13464 1354 aa19.56■□□□□ 0.72
RPGR-206ENST00000474584 HNRNPUQ00839 825 aaKnown RBP eCLIP19.56■□□□□ 0.72
RPGR-206ENST00000474584 CNTLNQ9NXG0 1405 aa19.56■□□□□ 0.72
RPGR-206ENST00000474584 DAPK1P53355 1430 aa19.55■□□□□ 0.72
RPGR-206ENST00000474584 KIAA0556O60303 1618 aa19.54■□□□□ 0.72
RPGR-206ENST00000474584 ANP32EQ9BTT0 268 aa19.53■□□□□ 0.72
RPGR-206ENST00000474584 POLR1AO95602 1720 aaPredicted RBP19.52■□□□□ 0.72
RPGR-206ENST00000474584 L3MBTL2Q969R5 705 aa19.52■□□□□ 0.72
RPGR-206ENST00000474584 RPRD2Q5VT52 1461 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms