RNA–Protein interactions for RNA: ENST00000473614.1

FN1-218, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-218ENST00000473614 IGF1RP08069 1367 aa11.53□□□□□ -0.56
FN1-218ENST00000473614 ABCA5Q8WWZ7 1642 aa11.53□□□□□ -0.56
FN1-218ENST00000473614 ERCC6Q03468 1493 aa11.51□□□□□ -0.57
FN1-218ENST00000473614 RAPGEF2Q9Y4G8 1499 aa11.5□□□□□ -0.57
FN1-218ENST00000473614 CUL7Q14999 1698 aa11.49□□□□□ -0.57
FN1-218ENST00000473614 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.48□□□□□ -0.57
FN1-218ENST00000473614 IFT140Q96RY7 1462 aa11.48□□□□□ -0.57
FN1-218ENST00000473614 MYCNP04198 464 aaPredicted RBP11.45□□□□□ -0.58
FN1-218ENST00000473614 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
FN1-218ENST00000473614 CEP162Q5TB80 1403 aa11.43□□□□□ -0.58
FN1-218ENST00000473614 CARMIL1Q5VZK9 1371 aa11.43□□□□□ -0.58
FN1-218ENST00000473614 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
FN1-218ENST00000473614 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
FN1-218ENST00000473614 UBTFP17480 764 aaKnown RBP11.41□□□□□ -0.58
FN1-218ENST00000473614 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
FN1-218ENST00000473614 ZNF608Q9ULD9 1512 aaPredicted RBP11.37□□□□□ -0.59
FN1-218ENST00000473614 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
FN1-218ENST00000473614 AQRO60306 1485 aaKnown RBP eCLIP11.36□□□□□ -0.599e-28■■■■■ 27.6
FN1-218ENST00000473614 ADAMTS12P58397 1594 aa11.36□□□□□ -0.59
FN1-218ENST00000473614 CLIP1P30622 1438 aa11.35□□□□□ -0.59
FN1-218ENST00000473614 FHAD1B1AJZ9 1412 aa11.35□□□□□ -0.59
FN1-218ENST00000473614 CTTNBP2Q8WZ74 1663 aa11.34□□□□□ -0.59
FN1-218ENST00000473614 ATXN8OSP0DMR3 200 aa11.34□□□□□ -0.59
FN1-218ENST00000473614 MAGI1Q96QZ7 1491 aaPredicted RBP11.31□□□□□ -0.6
FN1-218ENST00000473614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.3□□□□□ -0.6
FN1-218ENST00000473614 HNRNPUL2Q1KMD3 747 aaKnown RBP11.3□□□□□ -0.6
FN1-218ENST00000473614 ARHGAP35Q9NRY4 1499 aa11.28□□□□□ -0.6
FN1-218ENST00000473614 VPS8Q8N3P4 1428 aa11.27□□□□□ -0.6
FN1-218ENST00000473614 SNAPC4Q5SXM2 1469 aa11.27□□□□□ -0.6
FN1-218ENST00000473614 ARAP1Q96P48 1450 aa11.27□□□□□ -0.6
FN1-218ENST00000473614 EFCAB5A4FU69 1503 aa11.26□□□□□ -0.61
FN1-218ENST00000473614 SYNJ2O15056 1496 aa11.25□□□□□ -0.61
FN1-218ENST00000473614 U3KPZ7 1027 aaPredicted RBP11.25□□□□□ -0.61
FN1-218ENST00000473614 SAMD1Q6SPF0 538 aaPredicted RBP11.24□□□□□ -0.61
FN1-218ENST00000473614 GRIN2AQ12879 1464 aa11.24□□□□□ -0.61
FN1-218ENST00000473614 SAMD9Q5K651 1589 aa11.24□□□□□ -0.61
FN1-218ENST00000473614 IQGAP2Q13576 1575 aa11.21□□□□□ -0.61
FN1-218ENST00000473614 KIAA0586Q9BVV6 1533 aa11.2□□□□□ -0.62
FN1-218ENST00000473614 UGGT2Q9NYU1 1516 aa11.19□□□□□ -0.62
FN1-218ENST00000473614 NUP160Q12769 1436 aa11.19□□□□□ -0.62
FN1-218ENST00000473614 CEP170Q5SW79 1584 aa11.17□□□□□ -0.62
FN1-218ENST00000473614 MAP3K1Q13233 1512 aa11.17□□□□□ -0.62
FN1-218ENST00000473614 TRIM26Q12899 539 aaPredicted RBP11.15□□□□□ -0.62
FN1-218ENST00000473614 APLP2Q06481 763 aa11.14□□□□□ -0.63
FN1-218ENST00000473614 CHD1O14646 1710 aa11.14□□□□□ -0.63
FN1-218ENST00000473614 FMN1Q68DA7 1419 aa11.13□□□□□ -0.63
FN1-218ENST00000473614 CHMP7Q8WUX9 453 aaPredicted RBP11.13□□□□□ -0.63
FN1-218ENST00000473614 RANGAP1P46060 587 aaPredicted RBP11.12□□□□□ -0.63
FN1-218ENST00000473614 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
FN1-218ENST00000473614 FHOD3Q2V2M9 1422 aa11.11□□□□□ -0.63
FN1-218ENST00000473614 CASKIN1Q8WXD9 1431 aa11.11□□□□□ -0.63
FN1-218ENST00000473614 PCF11O94913 1555 aaKnown RBP11.11□□□□□ -0.63
FN1-218ENST00000473614 DISP1Q96F81 1524 aa11.1□□□□□ -0.63
FN1-218ENST00000473614 KIAA0556O60303 1618 aa11.1□□□□□ -0.63
FN1-218ENST00000473614 CFAP43Q8NDM7 1665 aa11.1□□□□□ -0.63
FN1-218ENST00000473614 TIAM1Q13009 1591 aa11.08□□□□□ -0.64
FN1-218ENST00000473614 SHROOM2Q13796 1616 aa11.08□□□□□ -0.64
FN1-218ENST00000473614 ATF5Q9Y2D1 282 aaPredicted RBP11.06□□□□□ -0.64
FN1-218ENST00000473614 LRRIQ1Q96JM4 1722 aa11.06□□□□□ -0.64
FN1-218ENST00000473614 PCGF6Q9BYE7 350 aa11.05□□□□□ -0.64
FN1-218ENST00000473614 RNF39Q9H2S5 420 aa11.05□□□□□ -0.64
FN1-218ENST00000473614 P3H3Q8IVL6 736 aa11.04□□□□□ -0.64
FN1-218ENST00000473614 CLASP1Q7Z460 1538 aa11.04□□□□□ -0.64
FN1-218ENST00000473614 FBLN2P98095 1184 aa11.03□□□□□ -0.64
FN1-218ENST00000473614 JPH4Q96JJ6 628 aa11.03□□□□□ -0.64
FN1-218ENST00000473614 HECW1Q76N89 1606 aa11.02□□□□□ -0.64
FN1-218ENST00000473614 CARMIL2Q6F5E8 1435 aa11.02□□□□□ -0.64
FN1-218ENST00000473614 LRRC9Q6ZRR7 1453 aa11.02□□□□□ -0.65
FN1-218ENST00000473614 KANK4Q5T7N3 995 aaPredicted RBP11.01□□□□□ -0.65
FN1-218ENST00000473614 PPARGC1BQ86YN6 1023 aaKnown RBP11.01□□□□□ -0.65
FN1-218ENST00000473614 CCDC18Q5T9S5 1454 aa11□□□□□ -0.65
FN1-218ENST00000473614 RAPGEF6Q8TEU7 1601 aa10.99□□□□□ -0.65
FN1-218ENST00000473614 CACNB1Q02641 598 aaPredicted RBP10.98□□□□□ -0.65
FN1-218ENST00000473614 C1QBPQ07021 282 aaKnown RBP10.98□□□□□ -0.65
FN1-218ENST00000473614 EPRSP07814 1512 aaKnown RBP10.97□□□□□ -0.65
FN1-218ENST00000473614 ABCA8O94911 1581 aa10.96□□□□□ -0.65
FN1-218ENST00000473614 PRG4Q92954 1404 aaPredicted RBP10.96□□□□□ -0.65
FN1-218ENST00000473614 RRBP1Q9P2E9 1410 aaKnown RBP10.96□□□□□ -0.65
FN1-218ENST00000473614 NUP153P49790 1475 aaKnown RBP10.95□□□□□ -0.66
FN1-218ENST00000473614 EHBP1L1Q8N3D4 1523 aa10.94□□□□□ -0.66
FN1-218ENST00000473614 ZNF219Q9P2Y4 722 aaPredicted RBP10.94□□□□□ -0.66
FN1-218ENST00000473614 ARHGEF11O15085 1522 aa10.94□□□□□ -0.66
FN1-218ENST00000473614 MAGI3Q5TCQ9 1506 aa10.93□□□□□ -0.66
FN1-218ENST00000473614 SUPT6HQ7KZ85 1726 aaKnown RBP10.92□□□□□ -0.66
FN1-218ENST00000473614 PLB1Q6P1J6 1458 aa10.91□□□□□ -0.66
FN1-218ENST00000473614 PTPRGP23470 1445 aa10.9□□□□□ -0.66
FN1-218ENST00000473614 ERCC6L2Q5T890 1561 aa10.9□□□□□ -0.67
FN1-218ENST00000473614 PHLDB1Q86UU1 1377 aa10.9□□□□□ -0.67
FN1-218ENST00000473614 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.9□□□□□ -0.67
FN1-218ENST00000473614 CDK13Q14004 1512 aaKnown RBP10.89□□□□□ -0.67
FN1-218ENST00000473614 MTUS2Q5JR59 1369 aa10.89□□□□□ -0.67
FN1-218ENST00000473614 TTBK1Q5TCY1 1321 aaPredicted RBP10.88□□□□□ -0.67
FN1-218ENST00000473614 CCNB3Q8WWL7 1395 aa10.88□□□□□ -0.67
FN1-218ENST00000473614 ADCY10Q96PN6 1610 aa10.87□□□□□ -0.67
FN1-218ENST00000473614 NCOA2Q15596 1464 aa10.87□□□□□ -0.67
FN1-218ENST00000473614 TRHP20396 242 aaPredicted RBP10.87□□□□□ -0.67
FN1-218ENST00000473614 ATP1B4Q9UN42 357 aaPredicted RBP10.87□□□□□ -0.67
FN1-218ENST00000473614 UHRF1BP1LA0JNW5 1464 aa10.87□□□□□ -0.67
FN1-218ENST00000473614 UACAQ9BZF9 1416 aa10.86□□□□□ -0.67
FN1-218ENST00000473614 CAPN15O75808 1086 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms